Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0365300-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:14924924:14927978:1 gene:Os01g0365300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0365300-01)
Sequence

ATGTTTAGACTTGTTCAAGTGTTGCAAGCAATTTCTATGTGTGCGTTCTTGCTTGTAGAT
GCAAGAGCTGTCCGATTGTATCCTTCTCTTCAAGAGGAAAATAATTCATTAGGGCAATAT
CTGCTACATGCTGCACCCAATCAGAAGATGATGCTGTATAAGACATTCATGATGTCAAAC
TCCATTCTGACAAGAAAAGTTGTACACGACATTAATTCAGCGAAGGTGTCATATTTTGCC
ACGCATCAATCTACTGGTCCTAATGAGAATTACTACGGGCTACGTGCGACGATGGATGTG
TATGGTCATGAACTAAAACCCGGTCAGCTGAGTGGAGGTGCACTTTGGGTCAGTCATTTC
GGTGACGATGGCAAACTATCAAGCTATAATGCAGTTGGCGCTGGTTGGCATATTGATCCT
GAACGCTATGGCGACTCTCGTCCTCACTTTTATACTTCCTGGACGAGAGATGGCTATGCG
ACCACTGGGTGCTACAATATGGACTGCCCAGGTTTTGAACGAGCAAACGGTGCTGCGGTT
GCACCAGGTGCTTCTATTGACCCAGTTTCAGATGACAAAAGCCTACAGAGTATTACAGTT
GAAGTGCTGTTGGACAGGGACAAGTGGAGATTGGTGGGTGTACTATGGCTTCAACGGTGT
TCCCACGGGGGTGGGCTCTTACCCAAAATCTCTGTTCACTAA

Peptide Sequence

PEP ID

Os01t0365300-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:14924924:14927978:1 gene:Os01g0365300 transcript:Os01t0365300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0365300-01)
Sequence

MFRLVQVLQAISMCAFLLVDARAVRLYPSLQEENNSLGQYLLHAAPNQKMMLYKTFMMSN
SILTRKVVHDINSAKVSYFATHQSTGPNENYYGLRATMDVYGHELKPGQLSGGALWVSHF
GDDGKLSSYNAVGAGWHIDPERYGDSRPHFYTSWTRDGYATTGCYNMDCPGFERANGAAV
APGASIDPVSDDKSLQSITVEVLLDRDKWRLVGVLWLQRCSHGGGLLPKISVH

Transcript Sequence

Transcript ID

Os01t0365300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:14924924:14927978:1 gene:Os01g0365300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0365300-01)
Sequence

GTTCTCATATCCTTTCTCTATGGGTACCCAAAATGTTTAGACTTGTTCAAGTGTTGCAAG
CAATTTCTATGTGTGCGTTCTTGCTTGTAGATGCAAGAGCTGTCCGATTGTATCCTTCTC
TTCAAGAGGAAAATAATTCATTAGGGCAATATCTGCTACATGCTGCACCCAATCAGAAGA
TGATGCTGTATAAGACATTCATGATGTCAAACTCCATTCTGACAAGAAAAGTTGTACACG
ACATTAATTCAGCGAAGGTGTCATATTTTGCCACGCATCAATCTACTGGTCCTAATGAGA
ATTACTACGGGCTACGTGCGACGATGGATGTGTATGGTCATGAACTAAAACCCGGTCAGC
TGAGTGGAGGTGCACTTTGGGTCAGTCATTTCGGTGACGATGGCAAACTATCAAGCTATA
ATGCAGTTGGCGCTGGTTGGCATATTGATCCTGAACGCTATGGCGACTCTCGTCCTCACT
TTTATACTTCCTGGACGAGAGATGGCTATGCGACCACTGGGTGCTACAATATGGACTGCC
CAGGTTTTGAACGAGCAAACGGTGCTGCGGTTGCACCAGGTGCTTCTATTGACCCAGTTT
CAGATGACAAAAGCCTACAGAGTATTACAGTTGAAGTGCTGTTGGACAGGGACAAGTGGA
GATTGGTGGGTGTACTATGGCTTCAACGGTGTTCCCACGGGGGTGGGCTCTTACCCAAAA
TCTCTGTTCACTAATATGGCAGAGAAGGCGAATGCTATCGCGTTTGGTGGCTATGTGGTT
ACTCGACGAGCACTGCCTACTCCACCAATGGGAAGCGGGTCTCACCCACATACTAATAAG
AGCCGTGCTGCATCACTGACTAATCTTGGTGTGATCAATCAGGATGGAAACACCAACCCT
ATCAACGCAGACTTGCCTACTTATATGGGCAATGAGTAATGCTACTCTATTACTCCTGTT
GCGCAGGCTGAGTGCTTTTATGGCGGGCCTGGTGGATGCATGCCCTAACTTGTTTTCTTT
TTCGAACTTTGATCTATCCAGAAAGTTATTTTGATCT