Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0356900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:14437890:14439688:-1 gene:Os01g0356900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Extensin-like protein. (Os01t0356900-01)
Sequence	ATGGGCACCCTCCCACCATTCCCGCCCCTCCTCCTCCTCGTCGCCGTCATCTTCTCCTTC CTCTCCTCGTCGTGCTTTGCTGTGACCAGCCATGAGGCGGCGGCCATCGCGCGGCGCCAG CTGCTCAACTTCGAGAAGCACGGCGACCACGTCCACATCGATATCGACATCGAGATCAAG GTGAGCAACCCGCGGCTGGCGGCGGCGCACAGGGCGCTGCACGCGCTGAAGCGGGCGCTC TACTCCGACCCCGGCAACTTCACCGGCGACTGGGCCGGCCCCGACGTGTGCGCCTACAAC GGCGTGCTCTGCGCGCCGTCGCCGGACAACGCGTCGGCGAGCGCCGTCGCGTCGCTGGAC ATGAACGCCGCCGACGTCGCGGGCTACCTGCCCAGGGAGATCGGCCTCCTGTCCGACCTC GCCGTGCTCCACCTCAACTCCAACCGCTTCTGCGGCGTCATCCCGGAGGAGGTCGCCAAC ATGACGCGGCTCTACGAGCTCGACGTCAGCAACAACCGCCTCGTCGGCGCGTTCCCCGGC GCGGTGCTCCGCGTCCCCGAGCTCAGCTACCTCGACATCCGGTTCAACGACTTCGACGGC CCCATTCCGCCGGAGCTCTTCCTCCGCCCCTACGACGCCATCTTCCTCAACAACAACCGC TTCACCTCCGGCATCCCGGACACCATCGGCAGGTCCACCGCGTCGGTCATCGTCCTCGCC AACAACGACCTCGGCGGCTGCATCCCGCCCACCATCGGCCAGGCCGCCGCCACGCTCGAC CAGTTCGTCTTCCTCAACAACAGCCTCACCGGCTGCCTGCCCCTCGAGTCGGGCCTCCTC GCCAACGCCACGGTGTTCGACGTCAGCCACAACCTGCTGACCGGCGCCATCCCCGCGACG ATGGGTGGCCTGGCCAAGGTCGAGCAGCTTGACCTGTCGCACAACACCTTCACCGGCGTT GTGCCGGGCGACGTCTGCGGGCTGCCGGCGTTGACGAACCTGTCGGTCTCGTACAACTTC ATCGCCGGGGAAGACGCCCAGTGCAGCAGCGCGCTGCTGGATGCGAAGCTCGACAAGTCG TTGGAGGACGAGGCTAACTGCATGGGCAACGTGAGGCCGATGCAGAGGAGTGCCGGTGAA TGTGCCCCGGTCGTGAGCCATCCGGTGGATTGCAGCAAGACCAAGCCCTGTGGATGGCCG GCGCCGGCGAAGAAGCCAGCGCCGGAGAGCTCAAAGCATTCACCGCCGCCGCCGCCGCCA CCAGCACCGGTACAATCCCCGCCACCACCGGCACCGGTGGTATCCCCGCCATCGCCAGTG TTCTCTCCACCGCCTGCCTTCTCGCCGCCGCCGCCGCCCAAGACATCTCCTCCACCGCCT GTCTCCTCGCCGCCGCCACCGCCACCGCCGACTATGTCCCCGCCGCCGCCAATTCAAGAG CCCGTCATCCTCCCGCCAATATTGTCAGCAAAATACCAATCGCCACCGCCACCGTTTTTC GAAGGATACTGA

Peptide Sequence

PEP ID	Os01t0356900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:14437890:14439688:-1 gene:Os01g0356900 transcript:Os01t0356900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Extensin-like protein. (Os01t0356900-01)
Sequence	MGTLPPFPPLLLLVAVIFSFLSSSCFAVTSHEAAAIARRQLLNFEKHGDHVHIDIDIEIK VSNPRLAAAHRALHALKRALYSDPGNFTGDWAGPDVCAYNGVLCAPSPDNASASAVASLD MNAADVAGYLPREIGLLSDLAVLHLNSNRFCGVIPEEVANMTRLYELDVSNNRLVGAFPG AVLRVPELSYLDIRFNDFDGPIPPELFLRPYDAIFLNNNRFTSGIPDTIGRSTASVIVLA NNDLGGCIPPTIGQAAATLDQFVFLNNSLTGCLPLESGLLANATVFDVSHNLLTGAIPAT MGGLAKVEQLDLSHNTFTGVVPGDVCGLPALTNLSVSYNFIAGEDAQCSSALLDAKLDKS LEDEANCMGNVRPMQRSAGECAPVVSHPVDCSKTKPCGWPAPAKKPAPESSKHSPPPPPP PAPVQSPPPPAPVVSPPSPVFSPPPAFSPPPPPKTSPPPPVSSPPPPPPPTMSPPPPIQE PVILPPILSAKYQSPPPPFFEGY

Transcript Sequence

Transcript ID	Os01t0356900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:14437890:14439688:-1 gene:Os01g0356900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Extensin-like protein. (Os01t0356900-01)
Sequence	AAACATCACGCTGCGATGTCTCCCCCCTCCATGACCTCCTCCTCTCTTTAGCCATTGGCT TCGGCCAAGGCTGATGAGACATTCCTAACCACCATGGGCACCCTCCCACCATTCCCGCCC CTCCTCCTCCTCGTCGCCGTCATCTTCTCCTTCCTCTCCTCGTCGTGCTTTGCTGTGACC AGCCATGAGGCGGCGGCCATCGCGCGGCGCCAGCTGCTCAACTTCGAGAAGCACGGCGAC CACGTCCACATCGATATCGACATCGAGATCAAGGTGAGCAACCCGCGGCTGGCGGCGGCG CACAGGGCGCTGCACGCGCTGAAGCGGGCGCTCTACTCCGACCCCGGCAACTTCACCGGC GACTGGGCCGGCCCCGACGTGTGCGCCTACAACGGCGTGCTCTGCGCGCCGTCGCCGGAC AACGCGTCGGCGAGCGCCGTCGCGTCGCTGGACATGAACGCCGCCGACGTCGCGGGCTAC CTGCCCAGGGAGATCGGCCTCCTGTCCGACCTCGCCGTGCTCCACCTCAACTCCAACCGC TTCTGCGGCGTCATCCCGGAGGAGGTCGCCAACATGACGCGGCTCTACGAGCTCGACGTC AGCAACAACCGCCTCGTCGGCGCGTTCCCCGGCGCGGTGCTCCGCGTCCCCGAGCTCAGC TACCTCGACATCCGGTTCAACGACTTCGACGGCCCCATTCCGCCGGAGCTCTTCCTCCGC CCCTACGACGCCATCTTCCTCAACAACAACCGCTTCACCTCCGGCATCCCGGACACCATC GGCAGGTCCACCGCGTCGGTCATCGTCCTCGCCAACAACGACCTCGGCGGCTGCATCCCG CCCACCATCGGCCAGGCCGCCGCCACGCTCGACCAGTTCGTCTTCCTCAACAACAGCCTC ACCGGCTGCCTGCCCCTCGAGTCGGGCCTCCTCGCCAACGCCACGGTGTTCGACGTCAGC CACAACCTGCTGACCGGCGCCATCCCCGCGACGATGGGTGGCCTGGCCAAGGTCGAGCAG CTTGACCTGTCGCACAACACCTTCACCGGCGTTGTGCCGGGCGACGTCTGCGGGCTGCCG GCGTTGACGAACCTGTCGGTCTCGTACAACTTCATCGCCGGGGAAGACGCCCAGTGCAGC AGCGCGCTGCTGGATGCGAAGCTCGACAAGTCGTTGGAGGACGAGGCTAACTGCATGGGC AACGTGAGGCCGATGCAGAGGAGTGCCGGTGAATGTGCCCCGGTCGTGAGCCATCCGGTG GATTGCAGCAAGACCAAGCCCTGTGGATGGCCGGCGCCGGCGAAGAAGCCAGCGCCGGAG AGCTCAAAGCATTCACCGCCGCCGCCGCCGCCACCAGCACCGGTACAATCCCCGCCACCA CCGGCACCGGTGGTATCCCCGCCATCGCCAGTGTTCTCTCCACCGCCTGCCTTCTCGCCG CCGCCGCCGCCCAAGACATCTCCTCCACCGCCTGTCTCCTCGCCGCCGCCACCGCCACCG CCGACTATGTCCCCGCCGCCGCCAATTCAAGAGCCCGTCATCCTCCCGCCAATATTGTCA GCAAAATACCAATCGCCACCGCCACCGTTTTTCGAAGGATACTGATAATCTAGTTTGAGG CCATGAGTGATGTGTTGTTGTCCGACACTAGTACAGAAAACGTCGAATGTAATATAAGCT CATGCTTTAACCACATTGAGGGTGCCCATTTACCTTTCCATTTTTAATGCTGTTTTTGAC CTGGTTTCAGGATTAACTGCTGGCTGGTCTGAAGAAATAAAGAGGGGTGGAATTAAAGT