Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0355100-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:14264078:14267208:1 gene:Os01g0355100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0355100-01)
Sequence	ATGAGAAGCGCCGGCACCATTAGCCAGCAGCTCACCCGCTACGCCGCGGCGCAGGCGCTG CTCCCGGGGGCGCACCTCCACGCCAGCCTCCTCAAGTCCGGCTCCCTCGCCTCGTTCCGC AACCACCTCATCTCCTTCTACTCCAAGTGCCGCCGCCCCTGCTGCGCCCGCAGGGTGTTC GACGAAATCCCTGACCCGTGCCACGTCTCCTGGTCATCCCTCGTCACCGCCTACTCCAAC AACGGCCTGCCCCGGAGTGCGATCCAGGCATTCCACGGCATGCGCGCGGAGGGTGTATGC TGCAATGAGTTCGCTCTCCCTGTTGTGCTCAAGTGCGTGCCGGACGCCCGCCTCGGTGCG CAGGTGCACGCCATGGCGATGGCTACGGGGTTTGGCAGTGACGTCTTCGTGGCGAACGCG CTTGTGGCCATGTACGGTGGATTTGGCTTCATGGATGATGCGAGGAGGGTGTTCAATGAG GCTGACAGCGAGAGGAACGCCGTCTCTTGGAATGGCCTGATGTCAGCGTATGTCAAGAAT GACCAGTGCGGTGATGCCATCCAGGTGTTTGGTGAGATGGTGTGGAGTGGGATTCAGCCT ACTGAATTTGGGTTCTCTTGCGTGGTGAACGCCTGCACGGGTTCCAGGAATATAGAGGCT GGAAGACAAGTGCATGCTATGGTGGTACGGATGGGCTATGACAAGGATGTGTTCACGGCC AATGCATTGGTTGACATGTACATGAAAATGGGGCGTGTTGATATTGCTTCTGTTATTTTT GAGAAAATGCCTGATTCGGATGTGGTCTCCTGGAATGCTTTAATTTCTGGGTGTGTACTT AATGGTCATGATCACCGTGCGATAGAGTTGTTACTGCAGATGAAATATTCAGGACTGGTT CCCAATGTGTTTACGTTGTCTAGCATCCTGAAGGCTTGTTCTGGTGCTGGGGCATTTGAT TTGGGTCGGCAAATCCACGGGTTCATGATCAAAGCCAATGCAGATTCAGATGATTATATA GGTGTTGGTCTTGTGGATATGTATGCAAAGAACCATTTTTTGGACGATGCAAGGAAGGTG TTTGATTGGATGTTCCATAGGGATTTGATTCTGTGTAATGCACTGATATCAGGTTGTTCT CATGGAGGGCGACATGATGAGGCTTTGTCCCTCTTTTACGAGTTGAGAAAGGAGGGTCTC GGCGTTAATAGGACAACATTGGCTGCTGTTCTCAAGTCCACAGCAAGCTTGGAGGCAGCC AGCACCACAAGACAGGTTCATGCTCTTGCAGTGAAGATAGGTTTCATATTTGACGCTCAT GTTGTCAATGGGCTTATTGATTCCTATTGGAAGTGCAGTTGTCTCAGTGATGCAAACAGA GTGTTTGAAGAATGTTCTTCTGGTGACATTATAGCTTGTACATCCATGATCACAGCACTC TCACAGTGTGACCATGGTGAGGGTGCAATAAAGCTGTTCATGGAAATGCTAAGGAAGGGG CTTGAGCCAGATCCTTTCGTGCTAAGTAGCTTACTGAATGCTTGTGCTAGCTTATCAGCT TATGAGCAAGGGAAGCAAGTCCATGCTCATCTGATCAAGCGACAGTTCATGTCAGATGCG TTTGCAGGGAATGCTCTTGTGTACACTTATGCTAAGTGTGGTAGCATAGAGGATGCAGAG TTGGCTTTCTCCAGCCTGCCAGAGAGGGGAGTTGTCTCATGGTCTGCAATGATCGGAGGG CTAGCACAGCATGGGCATGGGAAGAGAGCATTGGAATTGTTTGGCAGGATGGTTGATGAA GGCATTAATCCAAACCACATCACCATGACTAGTGTTCTCTGTGCTTGCAACCATGCAGGA CTTGTTGATGAGGCCAAGCGGTACTTCAATTCAATGAAGGAGATGTTTGGCATTGACAGG ACGGAGGAACATTACTCATGTATGATTGATTTGCTTGGCCGTGCTGGTAAACTAGACGAT GCAATGGAGCTTGTTAACAGCATGCCATTCCAAGCAAATGCCTCAATTTGGGGGGCGCTA CTAGGAGCCTCAAGAGTACACAAAGACCCAGAACTGGGAAAGCTGGCAGCTGAAAAGCTC TTCATCCTAGAGCCCGAGAAATCTGGTACACATGTTCTGCTTGCAAACACTTATGCATCT GCAGGCATGTGGAATGAGGTGGCTAAGGTGCGAAAGCTAATGAAAGACAGTAACATCAAG AAGGAACCTGCCATGAGCTGGATTGAGGTTAAGGACAAGGTGCATACTTTCATTGTTGGT GACAAGAGCCACCCAATGACAAAAGAGATATATGCAAAGCTAGTTGAATTGGGAGATCTA ATGAGCAAAGCTGGTTTTGTTCCAAATGTAGATGTTGATCTCCATGATTTAGACAGGAGT GAAAAGGAGTTGCTTCTTTCTCATCATAGTGAAAGGCTAGCTGTTGCGTTCGCTTTGCTC AGCACTCCACCTGGAGCACCCATTAGAGTCAAGAAAAATCTGCGCATATGCAGAGATTGC CATGTGGCATTTAAGTTCATTTCAAAGATTGTTTCGAGGGAAATTATCATCAGAGACATC AACCGATTCCATCATTTCAGAGATGGGACATGTTCTTGCGGTGATTACTGGTAG

Peptide Sequence

PEP ID	Os01t0355100-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:14264078:14267208:1 gene:Os01g0355100 transcript:Os01t0355100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0355100-01)
Sequence	MRSAGTISQQLTRYAAAQALLPGAHLHASLLKSGSLASFRNHLISFYSKCRRPCCARRVF DEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGA QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTA NALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLV PNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKV FDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAA STTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITAL SQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDA FAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDE GINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDD AMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYAS AGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDL MSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDC HVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW

Transcript Sequence

Transcript ID	Os01t0355100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:14264078:14267208:1 gene:Os01g0355100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0355100-01)
Sequence	ATGGCCTGAAGGTCAGACGATCCGCGTCCCCTCCTGGGACGCCACTCCCCCGCGCCATCG GCCACCGCCGCCGCGTCCTGCTCCTCCCCACCCACCGCCTCCATGTCCACCTCCTCCCCA TCACCCCACCATTGCCTCGACGATCTCCTCTCTCGGCGCCGCGGCCATCAATCCCGCGGC GGCCACCGTCTCCAAGTCCCATTCGCCGTGCAGCCATCGCCGGGGCCTCGCCCCCGTTGC CATCTCTAGAGCCGCGTGAAGGGAAGCAAAGGCCCTCCTCCACCCTAGAGCATTCTCTCC GGCGGCGCCGCTCGTGCCCGTAACTACGCCTTTCCGATGAGAAGCGCCGGCACCATTAGC CAGCAGCTCACCCGCTACGCCGCGGCGCAGGCGCTGCTCCCGGGGGCGCACCTCCACGCC AGCCTCCTCAAGTCCGGCTCCCTCGCCTCGTTCCGCAACCACCTCATCTCCTTCTACTCC AAGTGCCGCCGCCCCTGCTGCGCCCGCAGGGTGTTCGACGAAATCCCTGACCCGTGCCAC GTCTCCTGGTCATCCCTCGTCACCGCCTACTCCAACAACGGCCTGCCCCGGAGTGCGATC CAGGCATTCCACGGCATGCGCGCGGAGGGTGTATGCTGCAATGAGTTCGCTCTCCCTGTT GTGCTCAAGTGCGTGCCGGACGCCCGCCTCGGTGCGCAGGTGCACGCCATGGCGATGGCT ACGGGGTTTGGCAGTGACGTCTTCGTGGCGAACGCGCTTGTGGCCATGTACGGTGGATTT GGCTTCATGGATGATGCGAGGAGGGTGTTCAATGAGGCTGACAGCGAGAGGAACGCCGTC TCTTGGAATGGCCTGATGTCAGCGTATGTCAAGAATGACCAGTGCGGTGATGCCATCCAG GTGTTTGGTGAGATGGTGTGGAGTGGGATTCAGCCTACTGAATTTGGGTTCTCTTGCGTG GTGAACGCCTGCACGGGTTCCAGGAATATAGAGGCTGGAAGACAAGTGCATGCTATGGTG GTACGGATGGGCTATGACAAGGATGTGTTCACGGCCAATGCATTGGTTGACATGTACATG AAAATGGGGCGTGTTGATATTGCTTCTGTTATTTTTGAGAAAATGCCTGATTCGGATGTG GTCTCCTGGAATGCTTTAATTTCTGGGTGTGTACTTAATGGTCATGATCACCGTGCGATA GAGTTGTTACTGCAGATGAAATATTCAGGACTGGTTCCCAATGTGTTTACGTTGTCTAGC ATCCTGAAGGCTTGTTCTGGTGCTGGGGCATTTGATTTGGGTCGGCAAATCCACGGGTTC ATGATCAAAGCCAATGCAGATTCAGATGATTATATAGGTGTTGGTCTTGTGGATATGTAT GCAAAGAACCATTTTTTGGACGATGCAAGGAAGGTGTTTGATTGGATGTTCCATAGGGAT TTGATTCTGTGTAATGCACTGATATCAGGTTGTTCTCATGGAGGGCGACATGATGAGGCT TTGTCCCTCTTTTACGAGTTGAGAAAGGAGGGTCTCGGCGTTAATAGGACAACATTGGCT GCTGTTCTCAAGTCCACAGCAAGCTTGGAGGCAGCCAGCACCACAAGACAGGTTCATGCT CTTGCAGTGAAGATAGGTTTCATATTTGACGCTCATGTTGTCAATGGGCTTATTGATTCC TATTGGAAGTGCAGTTGTCTCAGTGATGCAAACAGAGTGTTTGAAGAATGTTCTTCTGGT GACATTATAGCTTGTACATCCATGATCACAGCACTCTCACAGTGTGACCATGGTGAGGGT GCAATAAAGCTGTTCATGGAAATGCTAAGGAAGGGGCTTGAGCCAGATCCTTTCGTGCTA AGTAGCTTACTGAATGCTTGTGCTAGCTTATCAGCTTATGAGCAAGGGAAGCAAGTCCAT GCTCATCTGATCAAGCGACAGTTCATGTCAGATGCGTTTGCAGGGAATGCTCTTGTGTAC ACTTATGCTAAGTGTGGTAGCATAGAGGATGCAGAGTTGGCTTTCTCCAGCCTGCCAGAG AGGGGAGTTGTCTCATGGTCTGCAATGATCGGAGGGCTAGCACAGCATGGGCATGGGAAG AGAGCATTGGAATTGTTTGGCAGGATGGTTGATGAAGGCATTAATCCAAACCACATCACC ATGACTAGTGTTCTCTGTGCTTGCAACCATGCAGGACTTGTTGATGAGGCCAAGCGGTAC TTCAATTCAATGAAGGAGATGTTTGGCATTGACAGGACGGAGGAACATTACTCATGTATG ATTGATTTGCTTGGCCGTGCTGGTAAACTAGACGATGCAATGGAGCTTGTTAACAGCATG CCATTCCAAGCAAATGCCTCAATTTGGGGGGCGCTACTAGGAGCCTCAAGAGTACACAAA GACCCAGAACTGGGAAAGCTGGCAGCTGAAAAGCTCTTCATCCTAGAGCCCGAGAAATCT GGTACACATGTTCTGCTTGCAAACACTTATGCATCTGCAGGCATGTGGAATGAGGTGGCT AAGGTGCGAAAGCTAATGAAAGACAGTAACATCAAGAAGGAACCTGCCATGAGCTGGATT GAGGTTAAGGACAAGGTGCATACTTTCATTGTTGGTGACAAGAGCCACCCAATGACAAAA GAGATATATGCAAAGCTAGTTGAATTGGGAGATCTAATGAGCAAAGCTGGTTTTGTTCCA AATGTAGATGTTGATCTCCATGATTTAGACAGGAGTGAAAAGGAGTTGCTTCTTTCTCAT CATAGTGAAAGGCTAGCTGTTGCGTTCGCTTTGCTCAGCACTCCACCTGGAGCACCCATT AGAGTCAAGAAAAATCTGCGCATATGCAGAGATTGCCATGTGGCATTTAAGTTCATTTCA AAGATTGTTTCGAGGGAAATTATCATCAGAGACATCAACCGATTCCATCATTTCAGAGAT GGGACATGTTCTTGCGGTGATTACTGGTAGAAACAGTTCGAAACAGGATTTATTGTAGCT TTTGAGAATTGTGGTGGTCAGAAAAGTATACACACGCTCAGAGAAGCTTAACAATTTAGA AAATTTTGTACCCACTGTAGCAACCATTTTAGGCAGTTGTTGGAGTATTTGATAAGCTAT GTGGTTTCTGT