Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0351800-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:14077661:14080700:1 gene:Os01g0351800 gene_biotype:protein_coding transcript_biotype:protein_coding description:2OG-Fe(II) oxygenase domain containing protein. (Os01t0351800-01)
Sequence

ATGGAGTCTCTCCCTGTGCCGAGTGTTCAGTCAATGGTGGCGGCTGACGGTGGTGCCCAT
GTGCCACCCAGGTACATCCGCCCGAGAGACGAGGCAGTTGCTACTGATGGAGAGACAGAG
ATCCCTGTCATTGACTTCCAGAGGCTGCAACTCGGCCATGACGAGGAGATGGCACGTCTT
GACAGGGCCTGCCAGGACTGGGGCTTTTTCCAGCTAATAAATCACAGCGTCCCAGAAGAT
GTGGTTGATGGGATGAAGGCCAACGCCCGGGGATTCTTTGAGCTGCCAGCGGAAACCAAG
AAGCAGTTTGCTCAGGAGCGAGGGCAGCTTGATGGTTATGGCCAGCTGTTTGTTGTCTCG
GAAGATCAGAAGCTCGACTGGGCTGACATTCTCTTCCTCAATACGCTGCCAGTGCAGAAC
AGGAATTTCAGATTCTGGCCTAACCAACTTGCTAAATTCAGATCGGCACTGGACAAATAC
TCTGCTGCTGTGAAGAGCATAGTGGATTTCCTCTTGGTTACAGTGGCGAACAACTTGGGA
GTGGATCCAGAGGTGATTGCGAACAAATGTGGCACTGATGGGATCCAGGCGGTGAGGATG
AACTACTACCCTCCGTGTGTTCAGGCGGACAAAGTCATCGGCTTCTCTCCTCACTCTGAC
TCTGATCTATTGACCCTTGTCCTCCAAGTGAATGAGGTGGATGGCCTGCAGATCAAGAGA
AACGAGACCTGGTTTCCTGTTAGGCCTTTGGAAGGCGCTTTCATTGTCAACGTGGGAGAC
ATTCTTCAGATATTCACAAACGGGAGGTACAAAAGTGCTGAGCACCGAGCTGTTGTCGAC
ATGAAGAAAGAGCGGCTGTCTATAGCAGCCTTCCATTCTCCAAGTGTCCATGCTGTCATT
GGTCCTCTGAAGGAGATGGTGGCGCATGAACATGAGGCTGTTTACAGGAGCATAGGCCAT
GATGAGTTTATGAAGCTCTTCTTCTCCTCCAAGCTGGAGGGGAAGAGCTTCTTGGACAGG
ATGAAGAAGCTCTAA

Peptide Sequence

PEP ID

Os01t0351800-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:14077661:14080700:1 gene:Os01g0351800 transcript:Os01t0351800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:2OG-Fe(II) oxygenase domain containing protein. (Os01t0351800-01)
Sequence

MESLPVPSVQSMVAADGGAHVPPRYIRPRDEAVATDGETEIPVIDFQRLQLGHDEEMARL
DRACQDWGFFQLINHSVPEDVVDGMKANARGFFELPAETKKQFAQERGQLDGYGQLFVVS
EDQKLDWADILFLNTLPVQNRNFRFWPNQLAKFRSALDKYSAAVKSIVDFLLVTVANNLG
VDPEVIANKCGTDGIQAVRMNYYPPCVQADKVIGFSPHSDSDLLTLVLQVNEVDGLQIKR
NETWFPVRPLEGAFIVNVGDILQIFTNGRYKSAEHRAVVDMKKERLSIAAFHSPSVHAVI
GPLKEMVAHEHEAVYRSIGHDEFMKLFFSSKLEGKSFLDRMKKL

Transcript Sequence

Transcript ID

Os01t0351800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:14077661:14080700:1 gene:Os01g0351800 gene_biotype:protein_coding transcript_biotype:protein_coding description:2OG-Fe(II) oxygenase domain containing protein. (Os01t0351800-01)
Sequence

GCAGCCGCCAGCGGGTCAACGAGCGAAGACGAAGGTGACAGGGCAAGCATAGCAGTGAGG
TAGCTAACCCTAGCGGGGGCGCGCGGGAGCGCGCCGCATTGTTCCTGAGAGCTAGCCAGA
AGGCCAACGGCGGTCGATCGTTGTCTCGGTGAGCCTGTTAGGCGCCGTTGGAGGAGATTG
AAATCAAGAGAGCAAGGATCCAAGCCAGCATCTCAGATTGAAGGAAAGGAGATGGAGTCT
CTCCCTGTGCCGAGTGTTCAGTCAATGGTGGCGGCTGACGGTGGTGCCCATGTGCCACCC
AGGTACATCCGCCCGAGAGACGAGGCAGTTGCTACTGATGGAGAGACAGAGATCCCTGTC
ATTGACTTCCAGAGGCTGCAACTCGGCCATGACGAGGAGATGGCACGTCTTGACAGGGCC
TGCCAGGACTGGGGCTTTTTCCAGCTAATAAATCACAGCGTCCCAGAAGATGTGGTTGAT
GGGATGAAGGCCAACGCCCGGGGATTCTTTGAGCTGCCAGCGGAAACCAAGAAGCAGTTT
GCTCAGGAGCGAGGGCAGCTTGATGGTTATGGCCAGCTGTTTGTTGTCTCGGAAGATCAG
AAGCTCGACTGGGCTGACATTCTCTTCCTCAATACGCTGCCAGTGCAGAACAGGAATTTC
AGATTCTGGCCTAACCAACTTGCTAAATTCAGATCGGCACTGGACAAATACTCTGCTGCT
GTGAAGAGCATAGTGGATTTCCTCTTGGTTACAGTGGCGAACAACTTGGGAGTGGATCCA
GAGGTGATTGCGAACAAATGTGGCACTGATGGGATCCAGGCGGTGAGGATGAACTACTAC
CCTCCGTGTGTTCAGGCGGACAAAGTCATCGGCTTCTCTCCTCACTCTGACTCTGATCTA
TTGACCCTTGTCCTCCAAGTGAATGAGGTGGATGGCCTGCAGATCAAGAGAAACGAGACC
TGGTTTCCTGTTAGGCCTTTGGAAGGCGCTTTCATTGTCAACGTGGGAGACATTCTTCAG
ATATTCACAAACGGGAGGTACAAAAGTGCTGAGCACCGAGCTGTTGTCGACATGAAGAAA
GAGCGGCTGTCTATAGCAGCCTTCCATTCTCCAAGTGTCCATGCTGTCATTGGTCCTCTG
AAGGAGATGGTGGCGCATGAACATGAGGCTGTTTACAGGAGCATAGGCCATGATGAGTTT
ATGAAGCTCTTCTTCTCCTCCAAGCTGGAGGGGAAGAGCTTCTTGGACAGGATGAAGAAG
CTCTAAATCAAAGCTGAGAGTAAGATCAGTGACAGAGAATCAGATCGAGTGATCGACAAG
CATCCTGTTGTGCTTGCTGGCATTCGATGAGGTATTGGACTTGAGGGCAAAGGATGCAAG
GGGTCCAACTCCAAGGTAAGTACTTAGAACCCATTGTAGTCTCTATTCATATCATTGTAT
CATCCTTGAGAGAGTACGTAGAACCCATTGTAGCCATCCGTGTGCTTGTTGAAATGGCTG
CAACTCTGTAACAGTGGAAGATTCAGGCACACAAAAATTTCAGACAAATGTTCGTAAGAT
ATCTGTAGGGATCAGATAGAATTGTTGATGGTCTTCAGATTGTTTTTTTTATGGCCAATG
ATATTCATACCTCAAATATATTTGATATGACCTAAATCAAATTAAAACTC