Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0350000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:13957514:13959224:1 gene:Os01g0350000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase family protein. (Os01t0350000-01)
Sequence

ATGGCCATGGAACTGTCCTTCACCGTGCACCGCCGCGAGGCGGTACTCGTCGGCCCATCG
GTTTCGACACCGTGCGAAACCAAGCGCCTCTCCGATATCGACGACCAAGAGTCCCTGCGC
TACCACGTTCCCGGCCTCCTCGTATACCGTGGTGGTCAGCCTCCGGCGCCATGTGTCCGC
GACAATGACCCGTCGGGCATCATCCGCGCGGCGCTGTCGCGGGCGCTGGTGCACTACTAC
CCGCTCGCCGGCAGGCTGAGAGAGGTGGAAGGACGGAAGCTGGTGATCGACTGCAGCGGC
GAGGGGGTGGTGTTCGTGGAGGCGGACGCGGACGTCCGGCTGGAAGAGATGGAGGCCGCC
GCCGCTGGTGGTCACGGGCTCAGGCCGTCATTCCCCTGCGTGGATCAGCTCGTCCCCGAC
GTGCGATCATCAGGCCGAGGAGGCAGCGTGCTCAGCTGCCCGCTGGTGGGAATCCAGGTG
ACACGCCTCCTCTGTGGTGGCTTCATCGTGGGGACCGCCGTCAACCACAGCGTGTGCGAT
GCTATGGGTATCGTCCAGTTCCTCAACGCCGTCGCCGACATCGCCGGTGGCCTCCCTGCG
CCGGCCGTCCACGCGACATGGTCGCGTGAGCTGCTCGATGCACGCAGCCCTCCGGCGCCG
GCGTTCCCACATCGCGAGTACGACATGATCGACATCCTCCCTGGAGGCGGCAGGGAGGCC
GACAACATCGTTCGATCCTTCCTGTTCAGCTCCACCGACATCGCCGCGCTTAAGGAGGAA
GCACTACTGCCACACCCCGAGCACCGCCTCCGCGGCGGCAGCAGCACGGCGACGAGCTTC
GAGGTCCTCGCGGCGTTCCTCTGGCGCGCTCGCACTGCGGCGCTGGAGGTCCCGGCGGAC
GAGGAGGTGCGCCTCGTCGCCGTCGTTGGCTTCAGCAGGATCGCCGCGCTGGGCCTACCA
TCCGGCTACTACGGCAACACATGCGCGTACCCCACGGTGGTGATGACCGCCGGGGAGCTG
CTCCGCGGTTGCACGCTGGGAGACGTGGTGAGGCTGGTGCAGGAGGCGAAGGCGGCCGTC
ACCGCCGAGTACGTGCGATCCACGGCCGAATGTCTGGTTCTGCGGCGGCGCCCGCGTTTA
GCCAGGACCAACCTCTTCGTCGTTACCGACGTCCGACGCGTGGGGTTCGACCGCGTGGAT
TTTGGGTGGGGCGACCCGGTGTACGGCGGCCCAGCTCGGGCGCTTCCCACGGTGAGCTTG
CTGGTCAACGTCAAGGGCAGCAGCAATGTCGTGGGTGCCGTTGTTTCATTGCCATCGCTC
GTCATGGGGAGGTTCTCGGCTGAGCTGGAGAGCTTTCTCAACACTTAG

Peptide Sequence

PEP ID

Os01t0350000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:13957514:13959224:1 gene:Os01g0350000 transcript:Os01t0350000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase family protein. (Os01t0350000-01)
Sequence

MAMELSFTVHRREAVLVGPSVSTPCETKRLSDIDDQESLRYHVPGLLVYRGGQPPAPCVR
DNDPSGIIRAALSRALVHYYPLAGRLREVEGRKLVIDCSGEGVVFVEADADVRLEEMEAA
AAGGHGLRPSFPCVDQLVPDVRSSGRGGSVLSCPLVGIQVTRLLCGGFIVGTAVNHSVCD
AMGIVQFLNAVADIAGGLPAPAVHATWSRELLDARSPPAPAFPHREYDMIDILPGGGREA
DNIVRSFLFSSTDIAALKEEALLPHPEHRLRGGSSTATSFEVLAAFLWRARTAALEVPAD
EEVRLVAVVGFSRIAALGLPSGYYGNTCAYPTVVMTAGELLRGCTLGDVVRLVQEAKAAV
TAEYVRSTAECLVLRRRPRLARTNLFVVTDVRRVGFDRVDFGWGDPVYGGPARALPTVSL
LVNVKGSSNVVGAVVSLPSLVMGRFSAELESFLNT

Transcript Sequence

Transcript ID

Os01t0350000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:13957514:13959224:1 gene:Os01g0350000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase family protein. (Os01t0350000-01)
Sequence

GTAACGCACTAACGTAACGACGGTCGATGGCCATGGAACTGTCCTTCACCGTGCACCGCC
GCGAGGCGGTACTCGTCGGCCCATCGGTTTCGACACCGTGCGAAACCAAGCGCCTCTCCG
ATATCGACGACCAAGAGTCCCTGCGCTACCACGTTCCCGGCCTCCTCGTATACCGTGGTG
GTCAGCCTCCGGCGCCATGTGTCCGCGACAATGACCCGTCGGGCATCATCCGCGCGGCGC
TGTCGCGGGCGCTGGTGCACTACTACCCGCTCGCCGGCAGGCTGAGAGAGGTGGAAGGAC
GGAAGCTGGTGATCGACTGCAGCGGCGAGGGGGTGGTGTTCGTGGAGGCGGACGCGGACG
TCCGGCTGGAAGAGATGGAGGCCGCCGCCGCTGGTGGTCACGGGCTCAGGCCGTCATTCC
CCTGCGTGGATCAGCTCGTCCCCGACGTGCGATCATCAGGCCGAGGAGGCAGCGTGCTCA
GCTGCCCGCTGGTGGGAATCCAGGTGACACGCCTCCTCTGTGGTGGCTTCATCGTGGGGA
CCGCCGTCAACCACAGCGTGTGCGATGCTATGGGTATCGTCCAGTTCCTCAACGCCGTCG
CCGACATCGCCGGTGGCCTCCCTGCGCCGGCCGTCCACGCGACATGGTCGCGTGAGCTGC
TCGATGCACGCAGCCCTCCGGCGCCGGCGTTCCCACATCGCGAGTACGACATGATCGACA
TCCTCCCTGGAGGCGGCAGGGAGGCCGACAACATCGTTCGATCCTTCCTGTTCAGCTCCA
CCGACATCGCCGCGCTTAAGGAGGAAGCACTACTGCCACACCCCGAGCACCGCCTCCGCG
GCGGCAGCAGCACGGCGACGAGCTTCGAGGTCCTCGCGGCGTTCCTCTGGCGCGCTCGCA
CTGCGGCGCTGGAGGTCCCGGCGGACGAGGAGGTGCGCCTCGTCGCCGTCGTTGGCTTCA
GCAGGATCGCCGCGCTGGGCCTACCATCCGGCTACTACGGCAACACATGCGCGTACCCCA
CGGTGGTGATGACCGCCGGGGAGCTGCTCCGCGGTTGCACGCTGGGAGACGTGGTGAGGC
TGGTGCAGGAGGCGAAGGCGGCCGTCACCGCCGAGTACGTGCGATCCACGGCCGAATGTC
TGGTTCTGCGGCGGCGCCCGCGTTTAGCCAGGACCAACCTCTTCGTCGTTACCGACGTCC
GACGCGTGGGGTTCGACCGCGTGGATTTTGGGTGGGGCGACCCGGTGTACGGCGGCCCAG
CTCGGGCGCTTCCCACGGTGAGCTTGCTGGTCAACGTCAAGGGCAGCAGCAATGTCGTGG
GTGCCGTTGTTTCATTGCCATCGCTCGTCATGGGGAGGTTCTCGGCTGAGCTGGAGAGCT
TTCTCAACACTTAGGTCATATATACTCAATGACCCCACTAGCTACGTACTGCACACCTGC
ATGCTACCACACAATAATTCATCTGTACGTTAGGGACGTACGGGTGGTAACCCAAAAATA
CTTTTAACTTTTACTACTAGACTATTCTATGCACGGGAAAAGCTTAATGATCGAAGGAAA
AGCTCTTCAATTGCTAATGTTATGAGATCTGTTCCGCTAAATATTTTTTAAGTAGGGTTT
TAGTTGGTCAGGACCTAGCAAATTAACATGAATTATGTGTTTCTATTGTACATATTCAGT
TACCAAAGGTGATTCCATTTCATCGTCGTTC