Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0349800-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:13941318:13944605:1 gene:Os01g0349800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cytochrome P450. (Os01t0349800-01)
Sequence	ATGGATGTTCCTTCTGTTGTGATCCCCATTTTGGTTGTGCTGGTCTCGAGACTCCTGACA AGCGCCCTGGTGCACCTGTTGTGGAAGCCCTACGCCATCACCAAGCTGTTCCGTGGGCAG GGCATCACAGGCCCCAAATACAGGCTCTTCGTCGGGTCCCTCCCGGAGATCAAGCGCATG AAGGCCGCCGCTGCCGCCGACGAGGTCGCCGCCGGCGCCCACTCCCACGACTTCATCCCC ATCGTGCTGCCCCAGCACAGCAAATGGGCCACAGATCACGGGAAGACGTTTCTTTACTGG CTTGGCGCTGTGCCGGCCGTCAGCCTCGGCAGGGTGGAGCAGGTGAAGCAGGTGCTGTTG GAGAGGACGGGGTCCTTCACGAAGAACTACATGAACGCGAACCTGGAGGCGCTGCTGGGC AAGGGCCTCATCCTGGCCAACGGCGAGGATTGGGAGCGCCATCGCAAGGTTGTGCACCCA GCGTTCAACCACGACAAGCTCAAGTTCATGTCTGTGGTCATGGCGGAAAGCGTGGAGTCG ATGGTCCAGCGCTGGCAATCACAGATACAGCAAGCTGGAAATAACCAGGTTGAATTAGAC CTAAGCAGAGAGTTGTCAGAGCTTACTTCTGATGTGATCACCCGCTCGGCCTTCGGTAGC AGCCACGAGGAGGGCAAAGAGGTCTACCAAGCACAGAAAGAGCTCCAAGAACTGGCCTTC TCATCATCATTAGATGTGCCAGCTCTGGTTTTTCTAAGGAAATTACCAATCATAAGGGGG AACACACGAGCTCATCAGCTCGTCAAGAAATCGAGGACCATGCTCATGGAGATAATCGAA GGACGGCTTGCCAAAGTCGAAGCTGCCGAAGCCGGCTATGGCAGTGATCTTCTTGGACTG ATGCTGGAGGCGCGAGCTCTGGAGAGGGAAGGGAACGGCCTGGTTCTCACCACCCAGGAG ATCATAGACGAGTGCAAGACCTTCTTCTTCGCGGGGCAAGACACTACCTCCAACCACCTC GTCTGGACGATGTTCCTGCTGAGCAGCAACGCTCAGTGGCAAGACAAGCTACGGGAGGAG GTGCTGACAGTGTGTGGAGATGCAATTCCAACGCCCGACATGGCTAACAGGCTGAAACTG GTTAACATGGTTCTCTTGGAATCACTGAGGCTGTACAGCCCAGTAGTAATCATAAGGAGG ATTGCTGGTTCAGATATCGATCTTGGCAACCTAAAAATTCCCAAGGGAACTGTGCTTTCC ATACCGATCGCCAAGATACACCGGGACAGGGATGTATGGGGACCCGATGCCGACGAGTTC AACCCTGCAAGGTTCAAGAATGGCGTGTCGAGAGCCGCGAGCTACCCAAACGCGCTGCTG TCCTTCTCACAGGGTCCAAGAGGTTGCATCGGCCAGACCTTCGCGATGCTAGAGTCGCAG ATCGCGATCGCCATGATCCTCCAGAGGTTCGAGTTTAGGCTGTCTCCATCGTACGTTCAT GCTCCCATGGAGGCGATCACCTTGAGGCCCAGGTTTGGACTTCCTGTTGTCCTAAGGAAT CTCCAGGGATGA

Peptide Sequence

PEP ID	Os01t0349800-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:13941318:13944605:1 gene:Os01g0349800 transcript:Os01t0349800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cytochrome P450. (Os01t0349800-01)
Sequence	MDVPSVVIPILVVLVSRLLTSALVHLLWKPYAITKLFRGQGITGPKYRLFVGSLPEIKRM KAAAAADEVAAGAHSHDFIPIVLPQHSKWATDHGKTFLYWLGAVPAVSLGRVEQVKQVLL ERTGSFTKNYMNANLEALLGKGLILANGEDWERHRKVVHPAFNHDKLKFMSVVMAESVES MVQRWQSQIQQAGNNQVELDLSRELSELTSDVITRSAFGSSHEEGKEVYQAQKELQELAF SSSLDVPALVFLRKLPIIRGNTRAHQLVKKSRTMLMEIIEGRLAKVEAAEAGYGSDLLGL MLEARALEREGNGLVLTTQEIIDECKTFFFAGQDTTSNHLVWTMFLLSSNAQWQDKLREE VLTVCGDAIPTPDMANRLKLVNMVLLESLRLYSPVVIIRRIAGSDIDLGNLKIPKGTVLS IPIAKIHRDRDVWGPDADEFNPARFKNGVSRAASYPNALLSFSQGPRGCIGQTFAMLESQ IAIAMILQRFEFRLSPSYVHAPMEAITLRPRFGLPVVLRNLQG

Transcript Sequence

Transcript ID	Os01t0349800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:13941318:13944605:1 gene:Os01g0349800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cytochrome P450. (Os01t0349800-01)
Sequence	ATCTCTCCACTCACAAACAAAGCACAAGAGTAAGATGGATGTTCCTTCTGTTGTGATCCC CATTTTGGTTGTGCTGGTCTCGAGACTCCTGACAAGCGCCCTGGTGCACCTGTTGTGGAA GCCCTACGCCATCACCAAGCTGTTCCGTGGGCAGGGCATCACAGGCCCCAAATACAGGCT CTTCGTCGGGTCCCTCCCGGAGATCAAGCGCATGAAGGCCGCCGCTGCCGCCGACGAGGT CGCCGCCGGCGCCCACTCCCACGACTTCATCCCCATCGTGCTGCCCCAGCACAGCAAATG GGCCACAGATCACGGGAAGACGTTTCTTTACTGGCTTGGCGCTGTGCCGGCCGTCAGCCT CGGCAGGGTGGAGCAGGTGAAGCAGGTGCTGTTGGAGAGGACGGGGTCCTTCACGAAGAA CTACATGAACGCGAACCTGGAGGCGCTGCTGGGCAAGGGCCTCATCCTGGCCAACGGCGA GGATTGGGAGCGCCATCGCAAGGTTGTGCACCCAGCGTTCAACCACGACAAGCTCAAGTT CATGTCTGTGGTCATGGCGGAAAGCGTGGAGTCGATGGTCCAGCGCTGGCAATCACAGAT ACAGCAAGCTGGAAATAACCAGGTTGAATTAGACCTAAGCAGAGAGTTGTCAGAGCTTAC TTCTGATGTGATCACCCGCTCGGCCTTCGGTAGCAGCCACGAGGAGGGCAAAGAGGTCTA CCAAGCACAGAAAGAGCTCCAAGAACTGGCCTTCTCATCATCATTAGATGTGCCAGCTCT GGTTTTTCTAAGGAAATTACCAATCATAAGGGGGAACACACGAGCTCATCAGCTCGTCAA GAAATCGAGGACCATGCTCATGGAGATAATCGAAGGACGGCTTGCCAAAGTCGAAGCTGC CGAAGCCGGCTATGGCAGTGATCTTCTTGGACTGATGCTGGAGGCGCGAGCTCTGGAGAG GGAAGGGAACGGCCTGGTTCTCACCACCCAGGAGATCATAGACGAGTGCAAGACCTTCTT CTTCGCGGGGCAAGACACTACCTCCAACCACCTCGTCTGGACGATGTTCCTGCTGAGCAG CAACGCTCAGTGGCAAGACAAGCTACGGGAGGAGGTGCTGACAGTGTGTGGAGATGCAAT TCCAACGCCCGACATGGCTAACAGGCTGAAACTGGTTAACATGGTTCTCTTGGAATCACT GAGGCTGTACAGCCCAGTAGTAATCATAAGGAGGATTGCTGGTTCAGATATCGATCTTGG CAACCTAAAAATTCCCAAGGGAACTGTGCTTTCCATACCGATCGCCAAGATACACCGGGA CAGGGATGTATGGGGACCCGATGCCGACGAGTTCAACCCTGCAAGGTTCAAGAATGGCGT GTCGAGAGCCGCGAGCTACCCAAACGCGCTGCTGTCCTTCTCACAGGGTCCAAGAGGTTG CATCGGCCAGACCTTCGCGATGCTAGAGTCGCAGATCGCGATCGCCATGATCCTCCAGAG GTTCGAGTTTAGGCTGTCTCCATCGTACGTTCATGCTCCCATGGAGGCGATCACCTTGAG GCCCAGGTTTGGACTTCCTGTTGTCCTAAGGAATCTCCAGGGATGAGATGGACCGTACGT ACTATTATATATTATACAGTGTGTCGATCTCTACGGTTCGTGCCTTCATTATATATTTGC GCAATTTTCCTTTATTTATCCTACGGAAAAGGTAATGAGTG