Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0347600-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:13842272:13843744:1 gene:Os01g0347600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ervatamin B (EC 3.4.22.-) (ERV-B). (Os01t0347600-01)
Sequence	ATGATGGCGCCTTCGCGTCCAATGGCTAGTGCCGTCCTCTTGGTTGTGTGCACGTTGATG GCTTTGCAGGCAATGGGGGCGGACGCGTACTACAACAACGGCAGCGACGACGGCGTGACG ATGCAGATGTTCGAGGAGTGGATGGCCAAGTTCGGCAAGACGTACAAGTGCCACGGCGAG AAGGAGCACCGCTTCGGCATCTTCCGCGACAACGTCCACTTCATCCGCGGCTACAAGCCG CAGGTCACCTACGACTCCGCCGTGGGGATCAACCAGTTCGCCGACCTCACCAACGACGAG TTCGTCGCCACCTACACCGGCGCCAAGCCGCCGCACCCCAAGGAGGCGCCCCGCCCCGTC GACCCCATCTGGACGCCCTGCTGCATCGACTGGAGGTTCAGGGGCGCCGTCACCGGCGTC AAGGACCAAGGCGCCTGCGGGTCTTGCTGGGCGTTCGCGGCGGTGGCGGCGATCGAGGGG CTGACGAAGATCAGGACGGGGCAGCTGACGCCGCTGTCGGAGCAGGAGCTGGTGGACTGC GACACCAACAGCAACGGGTGCGGCGGCGGGCACACGGACCGGGCGTTCGAGCTGGTGGCG TCCAAGGGCGGCATCACGGCGGAGAGCGACTACCGGTACGAGGGGTTCCAGGGGAAGTGC CGCGTGGACGACATGCTGTTCAACCACGCGGCGCGCATCGGCGGGTACCGCGCCGTGCCG CCCAATGACGAGCGGCAGCTGGCGACGGCGGTGGCGAGGCAGCCGGTGACGGTGTACATC GACGCGAGCGGGCCGGCGTTCCAGTTCTACAAGTCCGGGGTGTTCCCGGGGCCGTGCGGG GCGTCGTCAAACCACGCGGTGACGCTGGTGGGTTACTGCCAGGACGGCGCGTCGGGGAAG AAGTACTGGGTCGCCAAGAACTCGTGGGGAAAGACGTGGGGGCAGCAGGGCTACATCCTG CTGGAGAAGGACGTCCTGCAGCCGCATGGCACGTGCGGCCTCGCCGTCTCACCATTCTAC CCCACCGTCTAG

Peptide Sequence

PEP ID	Os01t0347600-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:13842272:13843744:1 gene:Os01g0347600 transcript:Os01t0347600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ervatamin B (EC 3.4.22.-) (ERV-B). (Os01t0347600-01)
Sequence	MMAPSRPMASAVLLVVCTLMALQAMGADAYYNNGSDDGVTMQMFEEWMAKFGKTYKCHGE KEHRFGIFRDNVHFIRGYKPQVTYDSAVGINQFADLTNDEFVATYTGAKPPHPKEAPRPV DPIWTPCCIDWRFRGAVTGVKDQGACGSCWAFAAVAAIEGLTKIRTGQLTPLSEQELVDC DTNSNGCGGGHTDRAFELVASKGGITAESDYRYEGFQGKCRVDDMLFNHAARIGGYRAVP PNDERQLATAVARQPVTVYIDASGPAFQFYKSGVFPGPCGASSNHAVTLVGYCQDGASGK KYWVAKNSWGKTWGQQGYILLEKDVLQPHGTCGLAVSPFYPTV

Transcript Sequence

Transcript ID	Os01t0347600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:13842272:13843744:1 gene:Os01g0347600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ervatamin B (EC 3.4.22.-) (ERV-B). (Os01t0347600-01)
Sequence	ATCACAATCTCGACATCTAGCAGCATCCAGTCTAAACACTAAAAAGATCAAAGTATCAAA CTTGACCAAGAGAAAACAATATTGTGTTGTAGCTTAGAAGTGATAAGTCACACTTGAGAT GATGGCGCCTTCGCGTCCAATGGCTAGTGCCGTCCTCTTGGTTGTGTGCACGTTGATGGC TTTGCAGGCAATGGGGGCGGACGCGTACTACAACAACGGCAGCGACGACGGCGTGACGAT GCAGATGTTCGAGGAGTGGATGGCCAAGTTCGGCAAGACGTACAAGTGCCACGGCGAGAA GGAGCACCGCTTCGGCATCTTCCGCGACAACGTCCACTTCATCCGCGGCTACAAGCCGCA GGTCACCTACGACTCCGCCGTGGGGATCAACCAGTTCGCCGACCTCACCAACGACGAGTT CGTCGCCACCTACACCGGCGCCAAGCCGCCGCACCCCAAGGAGGCGCCCCGCCCCGTCGA CCCCATCTGGACGCCCTGCTGCATCGACTGGAGGTTCAGGGGCGCCGTCACCGGCGTCAA GGACCAAGGCGCCTGCGGGTCTTGCTGGGCGTTCGCGGCGGTGGCGGCGATCGAGGGGCT GACGAAGATCAGGACGGGGCAGCTGACGCCGCTGTCGGAGCAGGAGCTGGTGGACTGCGA CACCAACAGCAACGGGTGCGGCGGCGGGCACACGGACCGGGCGTTCGAGCTGGTGGCGTC CAAGGGCGGCATCACGGCGGAGAGCGACTACCGGTACGAGGGGTTCCAGGGGAAGTGCCG CGTGGACGACATGCTGTTCAACCACGCGGCGCGCATCGGCGGGTACCGCGCCGTGCCGCC CAATGACGAGCGGCAGCTGGCGACGGCGGTGGCGAGGCAGCCGGTGACGGTGTACATCGA CGCGAGCGGGCCGGCGTTCCAGTTCTACAAGTCCGGGGTGTTCCCGGGGCCGTGCGGGGC GTCGTCAAACCACGCGGTGACGCTGGTGGGTTACTGCCAGGACGGCGCGTCGGGGAAGAA GTACTGGGTCGCCAAGAACTCGTGGGGAAAGACGTGGGGGCAGCAGGGCTACATCCTGCT GGAGAAGGACGTCCTGCAGCCGCATGGCACGTGCGGCCTCGCCGTCTCACCATTCTACCC CACCGTCTAGCCGGCCATATACATATATCGATCGCAGCTAGCCGCATGCCGGCCGTCATC CTCAGCCAGTTCTTCTTCTTTTTCCTCGCCGTTAGTTACAACAAGTTGGAATAATTAAGG AATAATGATCGAGTAGCGTTTGCGAGGTTAACTATTGAAATGAGTGAATGGTCCTGTTTG TTCGATGTTTAATGCGCTGGATTTCCCTTGAAAAGTACACATGATAATGACATACGTACT GGTGGTT