Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0347000-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:13794854:13799906:1 gene:Os01g0347000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Protein phosphatase 4 description:Similar to PROPYZAMIDE-HTPERSENSITIVE 1. (Os01t0347000-01)
Sequence	ATGGAAGAGGGATTCGTGGAATCAGGATCCTTCTCCCGCTCCTCCTCCTTCGGTGGGTTC GAGGAATGGATGGCGCTGGTGAGGAAACGCAATGGGAGTGGGACGCCCTCCTCGTCGTCT CCGCAGCAGCCCAGGTCTGGTGGATTTGCTGCCCAATCTTCAGTCAGTTCAGAAGGACTA GAACTTGGTCACCCTTATAGCGATGCGATTGACTATAGCTTATCATACCAACTACCAACA ACAAGCTTATGGGATAGGCTTGGGAGGGTTACTATGATGGACATCGAGTCAAGTGACTTC AACTGGAGCTCTCTCTCTTCACTGCACCATACAAAACATACTGATACTAGTACAGAACCC TACGAGGATGACACCAGCAGAAGTTTTGAGGTTACAGTAAATTCTGGAGGAGTTGTTTTC ATTGCATTATTCAAAACATCTGAATATGATGACCTTCCGTCCAAGGAGACTGCAGCGGTC ATTAAAATAGCGCCTTCAAGGATGGCCACTCAATCAGAACGCTTTGGCTATGAACTTGCG AAATGGCTTGGAGTGAGGACTCCTCAGGGCAGAGTGATTCACAACTTCTCATCTGAATGG CATCAAATGAAGGATGCAGTTGAGAACGCTCGGGATGCAGCGATATCTTCTTGTGATGAA CTCGAGGAAATGATTTGCACTGAGATGCTAGAGGCGCTCGAATTGAGCCGATGCTTATTC CTAATGAATTATGTACATGGCTCCCCTCTGCTAGAGAACACAATGCCATTTGATTCACAT GATTCTGCTGAAAAAACTGCTGAAGCTTTAGGAAGGGTCTTGATACTGGACCTTGTACTG AGAAATGAAGACAGGTTGCGATGCCGCCCCCTTGGTTGGCGGGGAAATTACGCAAATTTA CTTGTTGCCGACAGGAATGCTTATGCAAACCTCGATTCATTAGATGATGTTTATGATTCT GCAATCATTCGTTACAAGCCAGAGATCATCAGAAGCCCTCAGAATCGGAAGCCGAGAAGA GCAGTTTCAATAAGTGGCAGTATTGGCTCAGATACATCTGATCTCATGTTGCCGGACAAT CCTAGTCAGCCTGAGATTTCCAGCTTTCACATCATAGCCATTGATTCAGGTGTTCCACGC AGACCGCCTGCTTGCAAACGGGCGAAAGATCAAGAGAGCTATCCAAAGCTTGTGGAACTT ACACTCAACAATTGGGATTACTCTTCTAACCTTTTGTTTGAACTGTCATTTGGAAAACTC GGTATCCCAGGACCTGAAGAATTTGATGTGTCATCTGATCTTAGTTACCATTCTCCTCTG TCCGAAAGTGATATGGTAGCTGCGGTGAATTCCTTCCGAGGAGGTTTTCGTAGTGCTTTG AGGGACCTTCAACGATTCCACATTTTCCTTGTCACACTTTACCAGAAGCTGGATGGTCTA TTGAAAATCTTTTTCAATCTTATGTATAAAGTATTAAATGAATATGACAGGGAAGACGCT GGTTCATCTGATTCACCGTGTTCCACAGAGACACACATGGATTCACATGATTCTGAAGTT CCAAAGCATATGCGTAGGCCTTCCCGTACTTTATCCCGTGACAATTTTGACCTATCATCT CCTTCCAGTCGAGAGAACTTTATGATTAAGAATTTCAAAGGAAGCAGTGATGCTTCCCGT GGATTGCGGCTGACAATGAAACTACGGGATTTTAATAAGTATGCTAAGGCAGACGGTGAA TTATGCAAAGAAATAGAACAATGGAATGACATGCTCAGGACAGAAGTTGTGAAATTGTGT CAAGACAACAGTTTTAACACGGGTTTCTTTGAAGGAATAGATAATAGCATTGCAGTTGAT GCTTATGAATTGAAGGTTCGACTTGAGCACATTCTTGAGAGGATATCATTGATTTCTGAT GCTGCAAGCACCGAGCGTCCCTCTCAGATCACGGATTATTTGTATATTGGTGGTGCTCTA GCTGCTCGGTCAACATATACACTTAAACACCTTGGCATAACCCATGTTTTATGCTTGTGC GCAAATGAAATTGGGCAAGCAGAATCTCAGCAGCCTGATCGTTTCGACTATCAGAACTTC TCAATTAACGATGATGAAAATGCAGACATCAGTGATGTCTTCCAAGATGCTTCAGATTTC ATTGATTATGTTCAACACCTACATGGCAAAGTACTCGTCCATTGTTTTGAAGGAAAAAGT CGGAGCGCAACTGTTGTTCTTGCTTACCTGATGCTGAGAAAAAAATTCACTCTTCTGGAA GCATGGAACATGCTAAAGAAGGTGCACCGACGAGCGCACCCGAACGACGGCTTCGCCAAG GTCTTGTTGGATCTTGACAAGAAACTGCATGGTAAAATCTCCATGGAGTGGCACCACAGG AGGCCTGCAATGAAGGTGTGCCCCATCTGCGGCAAGAACGCTGGGCTCAGCAGCAGCTCA CTGAAGCTCCACCTGCAGAAGGCGCACCGGAAGATATCGTCGGGGAGCGTCGACACCGCC ATGAGTCTGGAGATCCAGAAGGCGGTGGAGGCGATCAAGGCTGGGCGTGGCGGCGGTGAC AGCCCGACGCATAGCGCTGAGAAGGTTACTTCCTGA

Peptide Sequence

PEP ID	Os01t0347000-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:13794854:13799906:1 gene:Os01g0347000 transcript:Os01t0347000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Protein phosphatase 4 description:Similar to PROPYZAMIDE-HTPERSENSITIVE 1. (Os01t0347000-01)
Sequence	MEEGFVESGSFSRSSSFGGFEEWMALVRKRNGSGTPSSSSPQQPRSGGFAAQSSVSSEGL ELGHPYSDAIDYSLSYQLPTTSLWDRLGRVTMMDIESSDFNWSSLSSLHHTKHTDTSTEP YEDDTSRSFEVTVNSGGVVFIALFKTSEYDDLPSKETAAVIKIAPSRMATQSERFGYELA KWLGVRTPQGRVIHNFSSEWHQMKDAVENARDAAISSCDELEEMICTEMLEALELSRCLF LMNYVHGSPLLENTMPFDSHDSAEKTAEALGRVLILDLVLRNEDRLRCRPLGWRGNYANL LVADRNAYANLDSLDDVYDSAIIRYKPEIIRSPQNRKPRRAVSISGSIGSDTSDLMLPDN PSQPEISSFHIIAIDSGVPRRPPACKRAKDQESYPKLVELTLNNWDYSSNLLFELSFGKL GIPGPEEFDVSSDLSYHSPLSESDMVAAVNSFRGGFRSALRDLQRFHIFLVTLYQKLDGL LKIFFNLMYKVLNEYDREDAGSSDSPCSTETHMDSHDSEVPKHMRRPSRTLSRDNFDLSS PSSRENFMIKNFKGSSDASRGLRLTMKLRDFNKYAKADGELCKEIEQWNDMLRTEVVKLC QDNSFNTGFFEGIDNSIAVDAYELKVRLEHILERISLISDAASTERPSQITDYLYIGGAL AARSTYTLKHLGITHVLCLCANEIGQAESQQPDRFDYQNFSINDDENADISDVFQDASDF IDYVQHLHGKVLVHCFEGKSRSATVVLAYLMLRKKFTLLEAWNMLKKVHRRAHPNDGFAK VLLDLDKKLHGKISMEWHHRRPAMKVCPICGKNAGLSSSSLKLHLQKAHRKISSGSVDTA MSLEIQKAVEAIKAGRGGGDSPTHSAEKVTS

Transcript Sequence

Transcript ID	Os01t0347000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:13794854:13799906:1 gene:Os01g0347000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Protein phosphatase 4 description:Similar to PROPYZAMIDE-HTPERSENSITIVE 1. (Os01t0347000-01)
Sequence	ATTGGAATATGGAAGAGGGATTCGTGGAATCAGGATCCTTCTCCCGCTCCTCCTCCTTCG GTGGGTTCGAGGAATGGATGGCGCTGGTGAGGAAACGCAATGGGAGTGGGACGCCCTCCT CGTCGTCTCCGCAGCAGCCCAGGTCTGGTGGATTTGCTGCCCAATCTTCAGTCAGTTCAG AAGGACTAGAACTTGGTCACCCTTATAGCGATGCGATTGACTATAGCTTATCATACCAAC TACCAACAACAAGCTTATGGGATAGGCTTGGGAGGGTTACTATGATGGACATCGAGTCAA GTGACTTCAACTGGAGCTCTCTCTCTTCACTGCACCATACAAAACATACTGATACTAGTA CAGAACCCTACGAGGATGACACCAGCAGAAGTTTTGAGGTTACAGTAAATTCTGGAGGAG TTGTTTTCATTGCATTATTCAAAACATCTGAATATGATGACCTTCCGTCCAAGGAGACTG CAGCGGTCATTAAAATAGCGCCTTCAAGGATGGCCACTCAATCAGAACGCTTTGGCTATG AACTTGCGAAATGGCTTGGAGTGAGGACTCCTCAGGGCAGAGTGATTCACAACTTCTCAT CTGAATGGCATCAAATGAAGGATGCAGTTGAGAACGCTCGGGATGCAGCGATATCTTCTT GTGATGAACTCGAGGAAATGATTTGCACTGAGATGCTAGAGGCGCTCGAATTGAGCCGAT GCTTATTCCTAATGAATTATGTACATGGCTCCCCTCTGCTAGAGAACACAATGCCATTTG ATTCACATGATTCTGCTGAAAAAACTGCTGAAGCTTTAGGAAGGGTCTTGATACTGGACC TTGTACTGAGAAATGAAGACAGGTTGCGATGCCGCCCCCTTGGTTGGCGGGGAAATTACG CAAATTTACTTGTTGCCGACAGGAATGCTTATGCAAACCTCGATTCATTAGATGATGTTT ATGATTCTGCAATCATTCGTTACAAGCCAGAGATCATCAGAAGCCCTCAGAATCGGAAGC CGAGAAGAGCAGTTTCAATAAGTGGCAGTATTGGCTCAGATACATCTGATCTCATGTTGC CGGACAATCCTAGTCAGCCTGAGATTTCCAGCTTTCACATCATAGCCATTGATTCAGGTG TTCCACGCAGACCGCCTGCTTGCAAACGGGCGAAAGATCAAGAGAGCTATCCAAAGCTTG TGGAACTTACACTCAACAATTGGGATTACTCTTCTAACCTTTTGTTTGAACTGTCATTTG GAAAACTCGGTATCCCAGGACCTGAAGAATTTGATGTGTCATCTGATCTTAGTTACCATT CTCCTCTGTCCGAAAGTGATATGGTAGCTGCGGTGAATTCCTTCCGAGGAGGTTTTCGTA GTGCTTTGAGGGACCTTCAACGATTCCACATTTTCCTTGTCACACTTTACCAGAAGCTGG ATGGTCTATTGAAAATCTTTTTCAATCTTATGTATAAAGTATTAAATGAATATGACAGGG AAGACGCTGGTTCATCTGATTCACCGTGTTCCACAGAGACACACATGGATTCACATGATT CTGAAGTTCCAAAGCATATGCGTAGGCCTTCCCGTACTTTATCCCGTGACAATTTTGACC TATCATCTCCTTCCAGTCGAGAGAACTTTATGATTAAGAATTTCAAAGGAAGCAGTGATG CTTCCCGTGGATTGCGGCTGACAATGAAACTACGGGATTTTAATAAGTATGCTAAGGCAG ACGGTGAATTATGCAAAGAAATAGAACAATGGAATGACATGCTCAGGACAGAAGTTGTGA AATTGTGTCAAGACAACAGTTTTAACACGGGTTTCTTTGAAGGAATAGATAATAGCATTG CAGTTGATGCTTATGAATTGAAGGTTCGACTTGAGCACATTCTTGAGAGGATATCATTGA TTTCTGATGCTGCAAGCACCGAGCGTCCCTCTCAGATCACGGATTATTTGTATATTGGTG GTGCTCTAGCTGCTCGGTCAACATATACACTTAAACACCTTGGCATAACCCATGTTTTAT GCTTGTGCGCAAATGAAATTGGGCAAGCAGAATCTCAGCAGCCTGATCGTTTCGACTATC AGAACTTCTCAATTAACGATGATGAAAATGCAGACATCAGTGATGTCTTCCAAGATGCTT CAGATTTCATTGATTATGTTCAACACCTACATGGCAAAGTACTCGTCCATTGTTTTGAAG GAAAAAGTCGGAGCGCAACTGTTGTTCTTGCTTACCTGATGCTGAGAAAAAAATTCACTC TTCTGGAAGCATGGAACATGCTAAAGAAGGTGCACCGACGAGCGCACCCGAACGACGGCT TCGCCAAGGTCTTGTTGGATCTTGACAAGAAACTGCATGGTAAAATCTCCATGGAGTGGC ACCACAGGAGGCCTGCAATGAAGGTGTGCCCCATCTGCGGCAAGAACGCTGGGCTCAGCA GCAGCTCACTGAAGCTCCACCTGCAGAAGGCGCACCGGAAGATATCGTCGGGGAGCGTCG ACACCGCCATGAGTCTGGAGATCCAGAAGGCGGTGGAGGCGATCAAGGCTGGGCGTGGCG GCGGTGACAGCCCGACGCATAGCGCTGAGAAGGTTACTTCCTGAACTCTTTGTGATGCTA GGGCTGGTGATGTTCGCTGAGCCACAGCTTGCATCACATCCTGCATCTCCCAGATCATGC GGCAATGTGTTACTTCACTTTATGAGCAAAACTGTACTACACCTGAAATTTTGACCAAAT TATATATATATAGGGGTTGTTCAGATTGTAGCCTAAATAAACCTTACCAAATTTTGGCAT TGGCAAGTTGACAATATTACCAAAATTTTGACAAGATTCCTTATGTATTTACCAAATTTT GACAACAAACTAAATGTAGGCACTTTTTTGGCAACCTTGTTAAAAATTGGTATGGTTGAA AATGGCATCAATCTAAACAGCCCCTAGAATACGATTTGTGCAGTGAGATGCCGAATTAGA GATGATTAGCATGATTCCGAAAGATTTTTCGCTTTTATCTCAACTTGTTCACCTGCACAA GTTTCCTTTTGTGGCTGAGTAAAAGAGCCTGTCTTAACTTCAGCGTTGTCTAATTTTGGT CCATGGTTCTGAGCAACGTGGCCTGTACAACAATAGTGATTCAGGTCTGGCTTGGCGATG GGCCTGATGTAGGCATGTAGCCACAACACTGGCAGTTCAGTAGCTTAACATGTTGGGACA GTTTATGC