Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0343300-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:13570702:13573119:1 gene:Os01g0343300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GATA TRANSCRIPTION FACTOR 8 description:Zinc finger, NHR/GATA-type domain containing protein. (Os01t0343300-01)
Sequence

ATGGGCTCCACCGATCGGAAGGTGGTGGGGATCGGCGTGGCGGAGGAAGGGAGGAGGAGC
TGCGTCGAATGCCGCGCCACCACCACGCCCATGTGGCGCAGCGGCCCGACCGGCCCCAGG
TCTCTATGCAACGCTTGCGGAATCCGGTACCGGAAGAAGAGGAGGCAGGATCTTGGGCTG
GACCTGAACCAGCCACAGAAGCAGGAGCATGGTGAGGTAATACCTGAAGTAAAAGACAGT
AACAGCAACAGCAACAACTGCAACAGTGGGAGTGGAAATAGCAGCAGCAACTTGCAGGTT
GTTCCGAAAAGGAGGCTTCTGATGGGTGTGGAGGAGGCTGCATTGTTGCTAATGACATTG
TCGTCCCCATCTGCATCCACATTGCTACATGGCTGA

Peptide Sequence

PEP ID

Os01t0343300-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:13570702:13573119:1 gene:Os01g0343300 transcript:Os01t0343300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GATA TRANSCRIPTION FACTOR 8 description:Zinc finger, NHR/GATA-type domain containing protein. (Os01t0343300-01)
Sequence

MGSTDRKVVGIGVAEEGRRSCVECRATTTPMWRSGPTGPRSLCNACGIRYRKKRRQDLGL
DLNQPQKQEHGEVIPEVKDSNSNSNNCNSGSGNSSSNLQVVPKRRLLMGVEEAALLLMTL
SSPSASTLLHG

Transcript Sequence

Transcript ID

Os01t0343300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:13570702:13573119:1 gene:Os01g0343300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GATA TRANSCRIPTION FACTOR 8 description:Zinc finger, NHR/GATA-type domain containing protein. (Os01t0343300-01)
Sequence

TCCTCCACAACTACTCTCTCCTCCTCCTCCTCCTCTACTACACGCTTCATCAACAACACA
GAAGCAAGAACTAGAGAAAAAATACGAACGATTCTCTTCTCCAACCAACGCTGTGTTAAT
CCGGATGGGCTCCACCGATCGGAAGGTGGTGGGGATCGGCGTGGCGGAGGAAGGGAGGAG
GAGCTGCGTCGAATGCCGCGCCACCACCACGCCCATGTGGCGCAGCGGCCCGACCGGCCC
CAGGTCTCTATGCAACGCTTGCGGAATCCGGTACCGGAAGAAGAGGAGGCAGGATCTTGG
GCTGGACCTGAACCAGCCACAGAAGCAGGAGCATGGTGAGGTAATACCTGAAGTAAAAGA
CAGTAACAGCAACAGCAACAACTGCAACAGTGGGAGTGGAAATAGCAGCAGCAACTTGCA
GGTTGTTCCGAAAAGGAGGCTTCTGATGGGTGTGGAGGAGGCTGCATTGTTGCTAATGAC
ATTGTCGTCCCCATCTGCATCCACATTGCTACATGGCTGACAATATCCTGCTCACCCCCA
ATCGCCAAATGTACATAGTACATACTACATACAAAGCACACACCACCAATGGTTCCAGAT
CATACAGGTTTCTTGGTTTATCAGGATGAGATAGGGGAGGGGCCCTATCTGAAGAAGATG
ATGATGATGGGATAATGTGAGGGATGGATTTGTGGCGATCTGATGACTCCGTCTGCTCCT
TCTCCGTGCCGCTGTATCGTAGATAAATTGATCATGTCGACCTTATCTGTTTGTGATTGT
GGTAGGATCCATATGATCAGAGGTCCGTTGATCTCACTCACACCCTTCTTTTTTTGTCCT
TTTATTTTTTATTTCCTTCTTTTTTGTTCTTCGAATATGTACATCGATGTTGCCCCCTGT
GAGGGAATGATGGTCAGAAGGAGACATCGTTCCTCTTCATTCTGAAATAAAAGTGAAAGT
AATAAAGAATTTATTTGTTCATC