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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0338600-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:13319295:13323798:-1 gene:Os01g0338600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes. (Os01t0338600-01)
Sequence

ATGGTGGTGGTGACGGCGGCGGCGCCGCCTCTCGGCATAGCGTTGGTGGGGCCGACGCGG
GCGAGGCGTGGAGGAGGGTTGTCGCTCTCCTCCTCCTCCTGCTGCTACCTGTCCATGTGC
GGCCGTGGCGTCCTGCGAGGGGGATGCGCGAGGATGAGGGAGCCGCTGCCGCCGGCCCCG
ATTGGGCTGGACCGGTTTCTCTGCGGATACATGCGAAGAGATGGGCATGAAGATGGTGAA
AGGAGTCAAGGAATAGAGGATTCTCTTATGTTTGGGCCAGACGATGATAATGGTTCAAAT
ATTCCTACTCAAGTTGAGACACTTGTTAGGGGTACTGCGACGGTTGCTACTCCAGAGTAT
AAGTCGATTCCAGATCTAGATTACCTGCAGGAGTTGCTGGCTATTCAGCAACAGGGACCG
CGGGCTATAGGTTTTTTTGGTACCCGTAACATGGGGTTTATGCATCAACAGCTTATTGAG
ATCCTGAGCTATGCTATGGTCATAACGAAAAATCATATATTCACATCTGGTGCTTCTGGG
ACTAATGCAGCTGTTATCCGGGGTGCTTTAAGGGCTGAAAAGCCAGAGTTGCTCACTGTA
ATTTTACCTCAAAGTCTAAAGAAGCAACCTCCTGAAAGTCAAGAGCTTTTATCTAAAGTA
CAAAACTTAATTGAGAAGCCTCAATATGACCATTTGCCACTAATTGAAGCGAGCAGGTTA
TGCAACATGGACATCATCTCGAAGGTCCAACAGGTGATTTGTTTTGCATTCCATGACAGC
AAGCTGCTGATGGAGACCTGCCAGGAGGCCAAGAATCTCCGGAAGATCGTAACCCTATTC
TACTTGGATTAG

Peptide Sequence

PEP ID

Os01t0338600-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:13319295:13323798:-1 gene:Os01g0338600 transcript:Os01t0338600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes. (Os01t0338600-01)
Sequence

MVVVTAAAPPLGIALVGPTRARRGGGLSLSSSSCCYLSMCGRGVLRGGCARMREPLPPAP
IGLDRFLCGYMRRDGHEDGERSQGIEDSLMFGPDDDNGSNIPTQVETLVRGTATVATPEY
KSIPDLDYLQELLAIQQQGPRAIGFFGTRNMGFMHQQLIEILSYAMVITKNHIFTSGASG
TNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVQNLIEKPQYDHLPLIEASRL
CNMDIISKVQQVICFAFHDSKLLMETCQEAKNLRKIVTLFYLD

Transcript Sequence

Transcript ID

Os01t0338600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:13319295:13323798:-1 gene:Os01g0338600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes. (Os01t0338600-01)
Sequence

AGGCTTAGGCCTAGCCATTCCCATGACCAACGCCCAGCCCCAGCCGCAGCCGCGCCACCA
CCACCAGCCTCGTCAATTCTGAGGGCGCCGCCAACACCAACACCACCACCATCGGGTCCT
CCTCCCCTTGCGGATTGGTTGCCTGACCCTCCTCCTCCTCCTCCTCCTCGTGTAGATTGA
TTGGTTCTTGGTGGTGGTGGTGGTGGATCGGGTGGCTTTGGCTGAGATGGTGGTGGTGAC
GGCGGCGGCGCCGCCTCTCGGCATAGCGTTGGTGGGGCCGACGCGGGCGAGGCGTGGAGG
AGGGTTGTCGCTCTCCTCCTCCTCCTGCTGCTACCTGTCCATGTGCGGCCGTGGCGTCCT
GCGAGGGGGATGCGCGAGGATGAGGGAGCCGCTGCCGCCGGCCCCGATTGGGCTGGACCG
GTTTCTCTGCGGATACATGCGAAGAGATGGGCATGAAGATGGTGAAAGGAGTCAAGGAAT
AGAGGATTCTCTTATGTTTGGGCCAGACGATGATAATGGTTCAAATATTCCTACTCAAGT
TGAGACACTTGTTAGGGGTACTGCGACGGTTGCTACTCCAGAGTATAAGTCGATTCCAGA
TCTAGATTACCTGCAGGAGTTGCTGGCTATTCAGCAACAGGGACCGCGGGCTATAGGTTT
TTTTGGTACCCGTAACATGGGGTTTATGCATCAACAGCTTATTGAGATCCTGAGCTATGC
TATGGTCATAACGAAAAATCATATATTCACATCTGGTGCTTCTGGGACTAATGCAGCTGT
TATCCGGGGTGCTTTAAGGGCTGAAAAGCCAGAGTTGCTCACTGTAATTTTACCTCAAAG
TCTAAAGAAGCAACCTCCTGAAAGTCAAGAGCTTTTATCTAAAGTACAAAACTTAATTGA
GAAGCCTCAATATGACCATTTGCCACTAATTGAAGCGAGCAGGTTATGCAACATGGACAT
CATCTCGAAGGTCCAACAGGTGATTTGTTTTGCATTCCATGACAGCAAGCTGCTGATGGA
GACCTGCCAGGAGGCCAAGAATCTCCGGAAGATCGTAACCCTATTCTACTTGGATTAGCT
CCTCAGGGGCTTCGCCCCCATTTTTGTCTGTAGGCTGGTTGGTGATAGAATATTTGGTTC
AGTTAGCTGTGTTCACTCTGAAACTCAGGAATGACACAGCCGAATAGGTGCAACCTTCAA
ATCGGGGAAGATCCTTTCGACCATTGTTTTGAATTTTGTATAAACCAAATAAGCTTGTCG
ATATGTCTGGTTCATCATTGAATGGAATAATTTAAAGTTCTTACTATTTCTGACCTGTGG
CCTGGCTACTTTTTATTTGAGAGGGTTTAGCTATTATTTTGC