Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0335700-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:13142060:13144941:-1 gene:Os01g0335700 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os01t0335700-01)
Sequence	ATGGAGATCGCGGTGGGCGCCCTGTCCGGCATGGTGGACGCTCTGCCGGCCAAGCTCGGC GACCTGCTGCAGCAGGAGTACACGCTGCTGTCCGGCGCCCGCGGGGACGTCGGCTTCCTC CAGTCCGAGCTCGGCACCATGAACGCCGCCCTCCTCCGGTGCGAGTCCCTCGAGAGCTCC GACGTCCAGACCCGGGCCTGGGTCGCCCAGGTCCGCGACCTCGCCTACGACATCGAGGAC TGGATCGACCTCTTCGCCCACCGCGTCGACGGCGGCGCCGCCGCCTCTCCGGGCGCTGCG GCCGCCACCTCCTCCTCCTCCTCCTCCGGCGGGTTCCTCTCCTGGGTGCGCTGCTGCGTC AACAAGGTCACGACGCTCCCCGCCCGCCACGTCATCGCTACCGAGCTGCAGGAGCTCAAG AACCGGGTCATCGAGCTGAGCGAGCAGCGGAAGCGCTACAGGTTCGATCCGCCGGCGCGT CACGCCGGCGGCCGGAGCGGCGTGGCGGCCGTTGACCCCAGGCTGGTTGCGCTCTATGCT GACACTAGTTCCCTCGTCGGCCTGGATGCGCCGGTGAAGAAGGTGTCCGAGATGGTGGTG GACGACGGCACGACTGGGCTCAAGGTGGTTTCCATCTCCGGGATGCCGGGCGCCGGGAAG ACGACGCTTGCCACGGCGGTGCTCCGGCGACTCAAGGAGGAGAACAAGTTCCATTGCAGC GCTTTCGTCTCCGTCGGTCAGAAGCCGGACATTGTAGGTAAGACACTGAAGGGCATCCTC TCCCAGATCGGCAATGGGTATGCAGGAGGCGAAGATATTGGCCGATTGATCGGAATGCTG AGAGATGAATTGAAGGATAAGAGGTACCTCATTGTCATTGATGATTTATGGGGTAGAACA GAATGGTCAACACTCAAGTGTTGTTTCCGAGATGATAATCTTGGCAGTAGGATAATGGTC ACAACCAGAAATGATGAGTTGGCAAAGGAATGTTCTTCCAATTCGGATGAATCAGTTTAC AAAACTGGTCTCCTTAGTGACGCGGACTCCAAAGATTTATTTTCCAACAAAGCTTTTGGG AAAGGGAAGGATTGTCCTAACCATTTGAAGGATCTCTATGATATAATCGTGGAAAGATGT GGGGGCTTGCCGCTTGCTATATCTAGCGTAGCTGGCGCACTAGCACATCGTTTTTCAAAA GATGAATGGGAGAGGTATGAATCTAACTTGCTACCTAGTTCACATTCCGATGAGCTGAAC TTGAAGCAAATACTTAATCTGAGTTACAACGATCTACCTTCACATCTCAAGTCATGTATG TTGTATCTAAGCATATTCCCAAATAAATATGAAATTGATGTGGAGCGCTTGGTGAGGCGA TGGATTGCTGAAGGATTCATCGCTGATGCACGCCATGCAAGCAAAGAGGAGACAGCAAGA AGTTACCTTACTGATCTCATTAGCAGAAACCTGATCCAGGCATTGCATCTGAGACATAAT GGCACCCCAAGCTGCTACACACTTCACCCAGTAATACATGATTTCATTGTGGTCAAGTCC ATGGAAGAGAACTTTGTCACTGTTCTAGATGCTAAGAAAGAAGCTCTCTCCACCAACAAT GGCACAGTCCGGCGACTCTCTCTTCAAAACAGTGTCAAACAGGATCTTGCTGGTGCACGA AATGATATGATCAAGCATGCTCGCTCAGTGACTGTCTTTGGTCATGCCAATGGGGTGCCT CGCCTGAATGATATGAGCGTATTACGTGTTCTGGATCTGGAAGGCTGCAATGGTCCATTA TGCCTCGATGGCCTCTGCAAATTGATTCTTTTGAGGTACCTGAACCTCAGGGGAACTGAT GTCAGCGAGCTCCCAGCACAAATTGGGGAGCTTAGGTGCCTGGAGACACTTGATGTGAGA TCTACGAAGGTGAAAGAGCTACCTGCCAGCATTGTCAGCTTGGAAAAGCTAATGCATTTG CTTGCTGGAAATGCTAAGTTGCCTGGCGAGATCAGTAAGATGAACGGCCTACTAACGTTG TCATGCGCCAACGTCTGGAAGAACACAGGGAGTGTCTTGCCAGAACTTGCTGATCTTGCA AACTTGAGGGAATTGGAACTGTTTTGTGATGCTTCTGAAATCTCTGGTGATAATAAGACA CGAGTCTCTTTTTCTAGCGACGGATTCAAAAGGCTTAAGCAGCTGAGCATCCAGGGCAGC TTGCCATCAGTGGCCTTTGTTAACAGTTCCTTGCGAAAGGTTGAAGTTCTTGAGCTGAAG TACGAAAAAGGCATTTCAGATGGGTCAAATGGTGTGTCTGGTATAGAGCATTTGCCTAGC CTGAAGCATGTATTGATTGAGTTCTCGCAGAAGGATGCTGGCGCCACTGCGACAATCGCT TCTGTGAGGAACGCCGCTGAGATGGTTCACCCTAATCATCCAGATGTCTCTGTCAAAGTT GATGGAAAGGCCATCTGA

Peptide Sequence

PEP ID	Os01t0335700-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:13142060:13144941:-1 gene:Os01g0335700 transcript:Os01t0335700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os01t0335700-01)
Sequence	MEIAVGALSGMVDALPAKLGDLLQQEYTLLSGARGDVGFLQSELGTMNAALLRCESLESS DVQTRAWVAQVRDLAYDIEDWIDLFAHRVDGGAAASPGAAAATSSSSSSGGFLSWVRCCV NKVTTLPARHVIATELQELKNRVIELSEQRKRYRFDPPARHAGGRSGVAAVDPRLVALYA DTSSLVGLDAPVKKVSEMVVDDGTTGLKVVSISGMPGAGKTTLATAVLRRLKEENKFHCS AFVSVGQKPDIVGKTLKGILSQIGNGYAGGEDIGRLIGMLRDELKDKRYLIVIDDLWGRT EWSTLKCCFRDDNLGSRIMVTTRNDELAKECSSNSDESVYKTGLLSDADSKDLFSNKAFG KGKDCPNHLKDLYDIIVERCGGLPLAISSVAGALAHRFSKDEWERYESNLLPSSHSDELN LKQILNLSYNDLPSHLKSCMLYLSIFPNKYEIDVERLVRRWIAEGFIADARHASKEETAR SYLTDLISRNLIQALHLRHNGTPSCYTLHPVIHDFIVVKSMEENFVTVLDAKKEALSTNN GTVRRLSLQNSVKQDLAGARNDMIKHARSVTVFGHANGVPRLNDMSVLRVLDLEGCNGPL CLDGLCKLILLRYLNLRGTDVSELPAQIGELRCLETLDVRSTKVKELPASIVSLEKLMHL LAGNAKLPGEISKMNGLLTLSCANVWKNTGSVLPELADLANLRELELFCDASEISGDNKT RVSFSSDGFKRLKQLSIQGSLPSVAFVNSSLRKVEVLELKYEKGISDGSNGVSGIEHLPS LKHVLIEFSQKDAGATATIASVRNAAEMVHPNHPDVSVKVDGKAI

Transcript Sequence

Transcript ID	Os01t0335700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:13142060:13144941:-1 gene:Os01g0335700 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os01t0335700-01)
Sequence	AGCAGGTTGGAGGTGTAAAGAGAGAACGAACCATCAGGAAGAAGACTTGGGGACTTGGTT CGAAGTCCACGCCCGCCCATCCTCGCCGTCGCTGCCGCCGCCGGCGAGCCGCCGGAATCC AGATCCAGAGAGAGAGAGCCGCCGCATCCGGTCGACATGGAGATCGCGGTGGGCGCCCTG TCCGGCATGGTGGACGCTCTGCCGGCCAAGCTCGGCGACCTGCTGCAGCAGGAGTACACG CTGCTGTCCGGCGCCCGCGGGGACGTCGGCTTCCTCCAGTCCGAGCTCGGCACCATGAAC GCCGCCCTCCTCCGGTGCGAGTCCCTCGAGAGCTCCGACGTCCAGACCCGGGCCTGGGTC GCCCAGGTCCGCGACCTCGCCTACGACATCGAGGACTGGATCGACCTCTTCGCCCACCGC GTCGACGGCGGCGCCGCCGCCTCTCCGGGCGCTGCGGCCGCCACCTCCTCCTCCTCCTCC TCCGGCGGGTTCCTCTCCTGGGTGCGCTGCTGCGTCAACAAGGTCACGACGCTCCCCGCC CGCCACGTCATCGCTACCGAGCTGCAGGAGCTCAAGAACCGGGTCATCGAGCTGAGCGAG CAGCGGAAGCGCTACAGGTTCGATCCGCCGGCGCGTCACGCCGGCGGCCGGAGCGGCGTG GCGGCCGTTGACCCCAGGCTGGTTGCGCTCTATGCTGACACTAGTTCCCTCGTCGGCCTG GATGCGCCGGTGAAGAAGGTGTCCGAGATGGTGGTGGACGACGGCACGACTGGGCTCAAG GTGGTTTCCATCTCCGGGATGCCGGGCGCCGGGAAGACGACGCTTGCCACGGCGGTGCTC CGGCGACTCAAGGAGGAGAACAAGTTCCATTGCAGCGCTTTCGTCTCCGTCGGTCAGAAG CCGGACATTGTAGGTAAGACACTGAAGGGCATCCTCTCCCAGATCGGCAATGGGTATGCA GGAGGCGAAGATATTGGCCGATTGATCGGAATGCTGAGAGATGAATTGAAGGATAAGAGG TACCTCATTGTCATTGATGATTTATGGGGTAGAACAGAATGGTCAACACTCAAGTGTTGT TTCCGAGATGATAATCTTGGCAGTAGGATAATGGTCACAACCAGAAATGATGAGTTGGCA AAGGAATGTTCTTCCAATTCGGATGAATCAGTTTACAAAACTGGTCTCCTTAGTGACGCG GACTCCAAAGATTTATTTTCCAACAAAGCTTTTGGGAAAGGGAAGGATTGTCCTAACCAT TTGAAGGATCTCTATGATATAATCGTGGAAAGATGTGGGGGCTTGCCGCTTGCTATATCT AGCGTAGCTGGCGCACTAGCACATCGTTTTTCAAAAGATGAATGGGAGAGGTATGAATCT AACTTGCTACCTAGTTCACATTCCGATGAGCTGAACTTGAAGCAAATACTTAATCTGAGT TACAACGATCTACCTTCACATCTCAAGTCATGTATGTTGTATCTAAGCATATTCCCAAAT AAATATGAAATTGATGTGGAGCGCTTGGTGAGGCGATGGATTGCTGAAGGATTCATCGCT GATGCACGCCATGCAAGCAAAGAGGAGACAGCAAGAAGTTACCTTACTGATCTCATTAGC AGAAACCTGATCCAGGCATTGCATCTGAGACATAATGGCACCCCAAGCTGCTACACACTT CACCCAGTAATACATGATTTCATTGTGGTCAAGTCCATGGAAGAGAACTTTGTCACTGTT CTAGATGCTAAGAAAGAAGCTCTCTCCACCAACAATGGCACAGTCCGGCGACTCTCTCTT CAAAACAGTGTCAAACAGGATCTTGCTGGTGCACGAAATGATATGATCAAGCATGCTCGC TCAGTGACTGTCTTTGGTCATGCCAATGGGGTGCCTCGCCTGAATGATATGAGCGTATTA CGTGTTCTGGATCTGGAAGGCTGCAATGGTCCATTATGCCTCGATGGCCTCTGCAAATTG ATTCTTTTGAGGTACCTGAACCTCAGGGGAACTGATGTCAGCGAGCTCCCAGCACAAATT GGGGAGCTTAGGTGCCTGGAGACACTTGATGTGAGATCTACGAAGGTGAAAGAGCTACCT GCCAGCATTGTCAGCTTGGAAAAGCTAATGCATTTGCTTGCTGGAAATGCTAAGTTGCCT GGCGAGATCAGTAAGATGAACGGCCTACTAACGTTGTCATGCGCCAACGTCTGGAAGAAC ACAGGGAGTGTCTTGCCAGAACTTGCTGATCTTGCAAACTTGAGGGAATTGGAACTGTTT TGTGATGCTTCTGAAATCTCTGGTGATAATAAGACACGAGTCTCTTTTTCTAGCGACGGA TTCAAAAGGCTTAAGCAGCTGAGCATCCAGGGCAGCTTGCCATCAGTGGCCTTTGTTAAC AGTTCCTTGCGAAAGGTTGAAGTTCTTGAGCTGAAGTACGAAAAAGGCATTTCAGATGGG TCAAATGGTGTGTCTGGTATAGAGCATTTGCCTAGCCTGAAGCATGTATTGATTGAGTTC TCGCAGAAGGATGCTGGCGCCACTGCGACAATCGCTTCTGTGAGGAACGCCGCTGAGATG GTTCACCCTAATCATCCAGATGTCTCTGTCAAAGTTGATGGAAAGGCCATCTGATACGGT CTGGAGTTTGTTTCAGAGCAAGAGGGATATAGTACACACTTGCACGGTACTTTCTGCCGG ATTTCTTTGTTGTGTTGAATTGAGTTTTGAGTTAATGCCATTCTTTGTCACTCTGCTTAT