Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0332800-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:12915334:12919043:-1 gene:Os01g0332800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SERINE CARBOXYPEPTIDASE 3 description:Similar to Serine carboxypeptidase II-like protein. (Os01t0332800-01);Similar to SCPL33. (Os01t0332800-02)
Sequence	ATCTTGCTTGCTCTCTCATTGCTGCAGACAATCACAGCAGAGGATGAGCAGGAGGCTGAT AGGGTTGCCTTCCTCCCTGGGCAGCCAAGGAGCCCACAGATGTCTCAGTTCTCAGGCTAC ATCACTGTGAACAGCCAGAATGGCAGGGCACTCTTCTACTGGTTCTTTGAGGCTCAGGCA CTGCCTTCCAAGAAGCCTCTCCTGCTCTGGCTTAATGGAGGTCCTGGTTGCTCATCTGTG GGCTATGGAGCAGCTTCTGAATTGGGTCCTCTCATGGTCAATGGAAATGGAACAGGTTTG GAATTCAACAAGTTTGCATGGAATAACGAGGCCAATTTGTTGTTCTTGGAATCTCCTGTT GGAGTCGGCTTCTCCTACACAAATACCTCGTCTGACCTAGAGAGCATCGATGACCGTTTT GTCGCTGAGGACACCTACAATTTCTTGGTGAATTGGTTCAAGAGGTTTCCTCAGTACAAA AACCATGACTTCTACATCTCTGGAGAGAGCTATGCAGGGCACTATGTTCCTCAGCTTGCT GATGTAGTGTATGAGCGCAACAAGCATGTTGAAACAAACCAGCATATCAATTTGAAAGGA TTTATTGTTGGCAATGCAGAGACTGATGATTACTATGACTACAAGGGACTAGTTGAGTTC GCTTGGAGTCACTCAGTGATCTCAGATCAACTCTATAAGCATGTCAACAATGTTTGCGAC TTCAGGTTATCACCCCGTAGCAATGAGTGTAACCATGTAATGGGATACATATATGATCAG TACGATATGATCGATATTTTCAATGTGTATGCACCTAAGTGCAACACTGATGACTCATCC CTCTTTTCCACCTCCTACAGTACAGCTGATATGAATGCTAAGAAGAGGCTTAAAGGCACG AGGATGTACTCAGGGTATGATCCGTGCTATTCGTCACATATCGAAGATTACATGAACAAG ATGGATGTGCAGAAATCACTTCATGCGAATACGAGTGGATTGATCAAGGACAGAAAATGG AGTATCTGCAGTTATTCAATATTCGACAATTACGACATCACGGTCTTCTCTGTTCTTCCT ATTTACTCTAAGCTTATCAAGGCTGGCCTACGAATATGGGTCTACAGTGGAGACGTGGAT GGCAGGGTTCCAGTTATTGGATCCCGGTACTGCGTAGAAGCCCTTGGCCTTCCTGTTAAG TCACAGTGGCAACCATGGTACCTAAACAATCAGGTTGCTGGGAGATTTGTTGAGTATCAA GGATTGACAATGGCCACAGTAAGAGGAGCTGGACATGCAGTGCCACAAGACAAGCCAGAA CAGGCACTGGTGGTAATCAATTCCTTTCTTTCAGGCAGGCGACTACCAACAAAAAACAAC CGATGA

Peptide Sequence

PEP ID	Os01t0332800-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:12915334:12919043:-1 gene:Os01g0332800 transcript:Os01t0332800-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SERINE CARBOXYPEPTIDASE 3 description:Similar to Serine carboxypeptidase II-like protein. (Os01t0332800-01);Similar to SCPL33. (Os01t0332800-02)
Sequence	ILLALSLLQTITAEDEQEADRVAFLPGQPRSPQMSQFSGYITVNSQNGRALFYWFFEAQA LPSKKPLLLWLNGGPGCSSVGYGAASELGPLMVNGNGTGLEFNKFAWNNEANLLFLESPV GVGFSYTNTSSDLESIDDRFVAEDTYNFLVNWFKRFPQYKNHDFYISGESYAGHYVPQLA DVVYERNKHVETNQHINLKGFIVGNAETDDYYDYKGLVEFAWSHSVISDQLYKHVNNVCD FRLSPRSNECNHVMGYIYDQYDMIDIFNVYAPKCNTDDSSLFSTSYSTADMNAKKRLKGT RMYSGYDPCYSSHIEDYMNKMDVQKSLHANTSGLIKDRKWSICSYSIFDNYDITVFSVLP IYSKLIKAGLRIWVYSGDVDGRVPVIGSRYCVEALGLPVKSQWQPWYLNNQVAGRFVEYQ GLTMATVRGAGHAVPQDKPEQALVVINSFLSGRRLPTKNNR

Transcript Sequence

Transcript ID	Os01t0332800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:12915334:12919043:-1 gene:Os01g0332800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SERINE CARBOXYPEPTIDASE 3 description:Similar to Serine carboxypeptidase II-like protein. (Os01t0332800-01);Similar to SCPL33. (Os01t0332800-02)
Sequence	ATCTTGCTTGCTCTCTCATTGCTGCAGACAATCACAGCAGAGGATGAGCAGGAGGCTGAT AGGGTTGCCTTCCTCCCTGGGCAGCCAAGGAGCCCACAGATGTCTCAGTTCTCAGGCTAC ATCACTGTGAACAGCCAGAATGGCAGGGCACTCTTCTACTGGTTCTTTGAGGCTCAGGCA CTGCCTTCCAAGAAGCCTCTCCTGCTCTGGCTTAATGGAGGTCCTGGTTGCTCATCTGTG GGCTATGGAGCAGCTTCTGAATTGGGTCCTCTCATGGTCAATGGAAATGGAACAGGTTTG GAATTCAACAAGTTTGCATGGAATAACGAGGCCAATTTGTTGTTCTTGGAATCTCCTGTT GGAGTCGGCTTCTCCTACACAAATACCTCGTCTGACCTAGAGAGCATCGATGACCGTTTT GTCGCTGAGGACACCTACAATTTCTTGGTGAATTGGTTCAAGAGGTTTCCTCAGTACAAA AACCATGACTTCTACATCTCTGGAGAGAGCTATGCAGGGCACTATGTTCCTCAGCTTGCT GATGTAGTGTATGAGCGCAACAAGCATGTTGAAACAAACCAGCATATCAATTTGAAAGGA TTTATTGTTGGCAATGCAGAGACTGATGATTACTATGACTACAAGGGACTAGTTGAGTTC GCTTGGAGTCACTCAGTGATCTCAGATCAACTCTATAAGCATGTCAACAATGTTTGCGAC TTCAGGTTATCACCCCGTAGCAATGAGTGTAACCATGTAATGGGATACATATATGATCAG TACGATATGATCGATATTTTCAATGTGTATGCACCTAAGTGCAACACTGATGACTCATCC CTCTTTTCCACCTCCTACAGTACAGCTGATATGAATGCTAAGAAGAGGCTTAAAGGCACG AGGATGTACTCAGGGTATGATCCGTGCTATTCGTCACATATCGAAGATTACATGAACAAG ATGGATGTGCAGAAATCACTTCATGCGAATACGAGTGGATTGATCAAGGACAGAAAATGG AGTATCTGCAGTTATTCAATATTCGACAATTACGACATCACGGTCTTCTCTGTTCTTCCT ATTTACTCTAAGCTTATCAAGGCTGGCCTACGAATATGGGTCTACAGTGGAGACGTGGAT GGCAGGGTTCCAGTTATTGGATCCCGGTACTGCGTAGAAGCCCTTGGCCTTCCTGTTAAG TCACAGTGGCAACCATGGTACCTAAACAATCAGGTTGCTGGGAGATTTGTTGAGTATCAA GGATTGACAATGGCCACAGTAAGAGGAGCTGGACATGCAGTGCCACAAGACAAGCCAGAA CAGGCACTGGTGGTAATCAATTCCTTTCTTTCAGGCAGGCGACTACCAACAAAAAACAAC CGATGATACAACCCAGATAAAACTTACACATAAAAATAAAGAAGGAATAAGTCATCGATA TTATCATACATAGATGAAACAATACATGTATTGTAGGCTCTTCATGTATGCAATTGTCTG TGTCAACTAGATGCCACCCTATACATTAATCTGTATATTTTCCTTATGTTTGAGTTTTAT GTTGAGAATGATAATTTCAACCCTATATTTTCAAACAAAGACTAGAACTTGCCCTTGTTA ATTCTTTGAATGTTTAGCACAATCTTATCAATGTAATTGCTTGAGACTTGAGATGCTTTA CC