Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0330200-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:12745559:12747074:-1 gene:Os01g0330200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C1A, papain family protein. (Os01t0330200-00)
Sequence	ATGGCTAGTAATATTGCAGTCGTCGTCCTGCTCGTGTGCACGTTCATGGCGTTGCAGGCG ATGGCGGCGGACGCCTACTACGACAACAACGGCGGGGGCGGCGGCGACGACAGCGTGACG ATGCAGATGTTCGAGGAGTGGATGGCCAAGTTCGGCAAGACGTACAAGTGCCACGGCGAG AAGGAGCACCGCTTCGCCGTCTTCCGCGACAACGTCCGCTTCATCCGGAGCTACAGGCCG GAGGCGACCTACGACTCCGCCGTGCGCATCAACCAGTTCGCCGACCTCACCAACGGCGAG TTCGTCGCCACCTACACCGGCGTCAAGCAGCCGCCGCCGGCGACGCACCCGCACCCGCAC CCCGAGGAGGCGCCCCGCCCCGTGGATCCCATCTGGATGCCGTGCTGCATCGACTGGAGG TTCAAGGGCGCCGTCACCGGCGTCAAGGACCAGGGCGCCTGCGGGTCAAGCTGGGCGTTC GCGGCGGTGGCGGCGATGGAGGGGCTGATGAAGATCAGGACGGGGCAGCTGACGCCGCTG TCGGAGCAGGAGCTGGTGGACTGCGTCGACGGCGGCGGCGACAGCGACGGGTGCGGCGGC GGGCACACGGACGCCGCGTTCCAGCTCGTCGTCGACAAGGGCGGCATCACGGCGGAGAGC GAGTACCGGTACGAGGGGTACAAGGGCAGGTGCCGCGTGGACGACATGCTGTTCAACCAC GCGGCGCGCGTCGGCGGCTACCGCGCCGTGCCGCCCGCCGACGAGCGGCAGCTGGCGACG GCCGTGGCGCGGCAACCCGTGACGGCGTACGTCGACGCGAGCGGGCCGGCGTTCCAGTTC TACGGCTCCGGCGTGTTCCCGGGCCCGCGCGGCACGGCGGCGCCCAAGCCCAACCACGCC GTGACGCTGGTGGGCTACTGCCAGGACGGCGCGTCCGGGAAGAAGTACTGGATAGCCAAG AACTCGTGGGGCAAGACGTGGGGACAGCAGGGCTACATCCTGCTCGAGAAGGACGTCGCA TCGCCGCATGGCACCTGCGGCCTCGCCGTCTCGCCGTTCTACCCCACCGTCTAG

Peptide Sequence

PEP ID	Os01t0330200-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:12745559:12747074:-1 gene:Os01g0330200 transcript:Os01t0330200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C1A, papain family protein. (Os01t0330200-00)
Sequence	MASNIAVVVLLVCTFMALQAMAADAYYDNNGGGGGDDSVTMQMFEEWMAKFGKTYKCHGE KEHRFAVFRDNVRFIRSYRPEATYDSAVRINQFADLTNGEFVATYTGVKQPPPATHPHPH PEEAPRPVDPIWMPCCIDWRFKGAVTGVKDQGACGSSWAFAAVAAMEGLMKIRTGQLTPL SEQELVDCVDGGGDSDGCGGGHTDAAFQLVVDKGGITAESEYRYEGYKGRCRVDDMLFNH AARVGGYRAVPPADERQLATAVARQPVTAYVDASGPAFQFYGSGVFPGPRGTAAPKPNHA VTLVGYCQDGASGKKYWIAKNSWGKTWGQQGYILLEKDVASPHGTCGLAVSPFYPTV

Transcript Sequence

Transcript ID	Os01t0330200-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:12745559:12747074:-1 gene:Os01g0330200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C1A, papain family protein. (Os01t0330200-00)
Sequence	ATCACGATAGCTAGCTACACCAGCAGCATGCATGCCAGCATCCAGCATAATTAAGAGTAG CTAAAAGATCAAACATTAACCAAGAGAAACAATTAATATTAGGCATTTATTTAGCTCGAA TAATCAAGTGATTAAGTTGGTGACACTTAATTAGGATGGCTAGTAATATTGCAGTCGTCG TCCTGCTCGTGTGCACGTTCATGGCGTTGCAGGCGATGGCGGCGGACGCCTACTACGACA ACAACGGCGGGGGCGGCGGCGACGACAGCGTGACGATGCAGATGTTCGAGGAGTGGATGG CCAAGTTCGGCAAGACGTACAAGTGCCACGGCGAGAAGGAGCACCGCTTCGCCGTCTTCC GCGACAACGTCCGCTTCATCCGGAGCTACAGGCCGGAGGCGACCTACGACTCCGCCGTGC GCATCAACCAGTTCGCCGACCTCACCAACGGCGAGTTCGTCGCCACCTACACCGGCGTCA AGCAGCCGCCGCCGGCGACGCACCCGCACCCGCACCCCGAGGAGGCGCCCCGCCCCGTGG ATCCCATCTGGATGCCGTGCTGCATCGACTGGAGGTTCAAGGGCGCCGTCACCGGCGTCA AGGACCAGGGCGCCTGCGGGTCAAGCTGGGCGTTCGCGGCGGTGGCGGCGATGGAGGGGC TGATGAAGATCAGGACGGGGCAGCTGACGCCGCTGTCGGAGCAGGAGCTGGTGGACTGCG TCGACGGCGGCGGCGACAGCGACGGGTGCGGCGGCGGGCACACGGACGCCGCGTTCCAGC TCGTCGTCGACAAGGGCGGCATCACGGCGGAGAGCGAGTACCGGTACGAGGGGTACAAGG GCAGGTGCCGCGTGGACGACATGCTGTTCAACCACGCGGCGCGCGTCGGCGGCTACCGCG CCGTGCCGCCCGCCGACGAGCGGCAGCTGGCGACGGCCGTGGCGCGGCAACCCGTGACGG CGTACGTCGACGCGAGCGGGCCGGCGTTCCAGTTCTACGGCTCCGGCGTGTTCCCGGGCC CGCGCGGCACGGCGGCGCCCAAGCCCAACCACGCCGTGACGCTGGTGGGCTACTGCCAGG ACGGCGCGTCCGGGAAGAAGTACTGGATAGCCAAGAACTCGTGGGGCAAGACGTGGGGAC AGCAGGGCTACATCCTGCTCGAGAAGGACGTCGCATCGCCGCATGGCACCTGCGGCCTCG CCGTCTCGCCGTTCTACCCCACCGTCTAGGTCCTGCAGCTAGCCGGCCACCTCCATCGCC GTCGTGCCGTCCCTAGCAATAATGTGCAAGCCATCCAACTAGTTTAGGTGTTGTTACAGG GTCTGCAAGGTACGTAAAGGTGAAGTAATATGAACCGTTGATTAAGTGAGAGGAATTGTA CGGAAATAAAATTATCGTAAACGATGGTAATGGAATAATTAACTAGT