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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0329400-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:12704756:12707798:-1 gene:Os01g0329400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitochondrial substrate carrier family protein. (Os01t0329400-01);Similar to predicted protein. (Os01t0329400-02)
Sequence

GTGAAGACCAGAATGCAGGTTGCAGAAGGAGGGCTTTCACACATGTCTGGCTTTTCTGTT
TTCAGAAGGATATTGAGAAGTGATGGCATCCCTGGTGCTTTCAGAGGCTTTGGCACCTCA
GCAGTTGGAGCACTGCCTGGCCGGGTCTTTGCTCTGACTTCATTAGAGGTGTCCAAAGAA
ATGGCATTCAAATACTCTGAACATTTTGATATGTCAGAGGCATCAAGGATTGCTGTAGCT
AATGGTATAGCAGGTCTAGTGTCAAGTATATTCTCAAGCGCATATTTTGTGCCATTAGAT
GTGATTTGCCAAAGGCTCATGGCTCAAGGACTACCAGGGATGGCCACATACAGAGGCCCA
TTTGATGTGATAAGCAAGGTTGTCAGGACTGAGGGGCTCCGGGGCCTTTACCGCGGTTTT
GGAATCACCATGTTGACTCAATCTCCAGCCTCTGCCCTTTGGTGGAGTTCATATGGTGGT
GCTCAACATGCCATATGGAGGAGCTTGGGTTATGGAATTGATTCACAAAAGAAACCATCT
CAATCAGAACTAGTTGTCGTTCAAGCAACTGCTGGAACAATAGCTGGTGCTTGCTCATCA
ATAATCACGACACCAATCGATACCATTAAGACACGACTTCAGGTGATGGATAACTATGGT
AGGGGCAGGCCATCTGTCATGAAAACCACCAGGGTGCTGCTAGAGGAAGATGGCTGGAGA
GGTTTCTACAGGGGGTTTGGACCGCGGTTTCTCAACATGTCCCTGTGGGGTACATCCATG
ATTGTAACTTACGAGCTAATAAAGAGGCTCTCCGTCAAGCCGGAGTGA

Peptide Sequence

PEP ID

Os01t0329400-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:12704756:12707798:-1 gene:Os01g0329400 transcript:Os01t0329400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitochondrial substrate carrier family protein. (Os01t0329400-01);Similar to predicted protein. (Os01t0329400-02)
Sequence

VKTRMQVAEGGLSHMSGFSVFRRILRSDGIPGAFRGFGTSAVGALPGRVFALTSLEVSKE
MAFKYSEHFDMSEASRIAVANGIAGLVSSIFSSAYFVPLDVICQRLMAQGLPGMATYRGP
FDVISKVVRTEGLRGLYRGFGITMLTQSPASALWWSSYGGAQHAIWRSLGYGIDSQKKPS
QSELVVVQATAGTIAGACSSIITTPIDTIKTRLQVMDNYGRGRPSVMKTTRVLLEEDGWR
GFYRGFGPRFLNMSLWGTSMIVTYELIKRLSVKPE

Transcript Sequence

Transcript ID

Os01t0329400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:12704756:12707798:-1 gene:Os01g0329400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitochondrial substrate carrier family protein. (Os01t0329400-01);Similar to predicted protein. (Os01t0329400-02)
Sequence

TGTGAAGACCAGAATGCAGGTTGCAGAAGGAGGGCTTTCACACATGTCTGGCTTTTCTGT
TTTCAGAAGGATATTGAGAAGTGATGGCATCCCTGGTGCTTTCAGAGGCTTTGGCACCTC
AGCAGTTGGAGCACTGCCTGGCCGGGTCTTTGCTCTGACTTCATTAGAGGTGTCCAAAGA
AATGGCATTCAAATACTCTGAACATTTTGATATGTCAGAGGCATCAAGGATTGCTGTAGC
TAATGGTATAGCAGGTCTAGTGTCAAGTATATTCTCAAGCGCATATTTTGTGCCATTAGA
TGTGATTTGCCAAAGGCTCATGGCTCAAGGACTACCAGGGATGGCCACATACAGAGGCCC
ATTTGATGTGATAAGCAAGGTTGTCAGGACTGAGGGGCTCCGGGGCCTTTACCGCGGTTT
TGGAATCACCATGTTGACTCAATCTCCAGCCTCTGCCCTTTGGTGGAGTTCATATGGTGG
TGCTCAACATGCCATATGGAGGAGCTTGGGTTATGGAATTGATTCACAAAAGAAACCATC
TCAATCAGAACTAGTTGTCGTTCAAGCAACTGCTGGAACAATAGCTGGTGCTTGCTCATC
AATAATCACGACACCAATCGATACCATTAAGACACGACTTCAGGTGATGGATAACTATGG
TAGGGGCAGGCCATCTGTCATGAAAACCACCAGGGTGCTGCTAGAGGAAGATGGCTGGAG
AGGTTTCTACAGGGGGTTTGGACCGCGGTTTCTCAACATGTCCCTGTGGGGTACATCCAT
GATTGTAACTTACGAGCTAATAAAGAGGCTCTCCGTCAAGCCGGAGTGATGAGCCTTTTG
GCTTCTGTTCCAAATAGATGGTGTAATCTTGAAGACCCACAATCCTTATCTGTGATGGGC
TGACGGCTATCTAGTGAGTTCTTCTCAAGAAAGGGATTTGGAAAGTAACAAAATCCAATC
AAGAAGTTTTAGTGATGGAAACTGTTTTATAACTACAGGGGAAGTATTAGCAAGTTAGTA
GCTTAACAAGTTCCTCCTATACACTGTAAATATTTACTAGGGTTCTGTATGAAGTTCTTC
TGAAGGTGCTTCATCCAGGATGTAATAGCCTGAGGCTTGCCCTGGCTACTGGGGGCAACA
TGTACGCGGCTCATAAAACCCTAAAAATTTTGGCAATGAGCTTTTGTATCTCTTTCCATG
AGGCAACAAATTCCCACGGTATCTCGCTTGGTTTAATTTGTTATCATTTTTAGCAGATTC
TAGCTAGCCACGGTCTTGAGATGGATGATGTAGCCAAACCAATTTAATGGAAAATGTACT
CGCTTAATATG