Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0328900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:12667369:12672739:-1 gene:Os01g0328900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl transferase, family 31 domain containing protein. (Os01t0328900-01)
Sequence	ATGAGGAAGTGCACCGGCGTGCTGCTCATCCTGACCCTCGCCGTCCTCCTCCTCCTCCTC TCCCCGTCACCCTCCACCGCGCCTCCGCCCGCCGCCACCGCCGCCGGCGGCCCAGCGGCC CGCCTCCTCCCCACCCTCCCGGGCCTCTCCCGCCTCTACCCTCCCCCGGCCAACTCCACC GCCCACCACTCCTGGCGCCTCCTCCGCCCCCTCCTCCTCCGCTCCGACGCGCTCCCGGGC ACCGCCGCGGGAGTCCTCGAGGCCGCCGACGCATGGCGCAACCTCACCCTCGCCGTCGCG GCATCGGCGGCCGGCGGCAAGGACGGGCGGCGCCAGGGAGACCTCGATGTGAGCTGCCGG TCGTCCGTGGAAGGGGATCTGGGCGGCGTGGGCGCCCGGGGCGTCAAGATCCCGTGCGGG CTCGCGGAGGGCTCCGCGGTGACGGTGGTCGGGGTGCCCAAGCCCGGGGCGGCCTGGTTC CGGGTGGAGATGGTGGGGGGCGGCGGCGAGGTGGTGGTCTCCGTCAATGTGAGCTTGGGA GTCGCCGAGATGGTGGTGGAGCAGAGCTCCTGGACGCGCGAGGAGGGGTGGGGATTGTCG GAGCGGTGTCCTCCGGTTGGTGATGCCGATCGCAATAGCAGCTCACTGCTTAGTCTAGTG GATGGGCTTGTTCGTTGCAATCAGCAAGCGGGTGTCAGTGGCCTTCAGGGGAGGAACAAT ACAATGGCAAATGTTACTGCAAACGAGCATGAAAATGAGAAAAGGCCAAAAGGACGTGCA AATTTTGGTGGTAGTTTTTCTATTATTGAAGGGGAGCCTTTTACAGCAACATTATGGGCT GGTGCAGAAGGGTTCCATATGACAGTAAATGGAAGGCATGATACGTCATTTGCATACAGA GAGAGGCTGGAGCCATGGTCTGTAGCAGAAGTTAAGGTTTCTGGTGATCTGGAGCTCCTG TCAGTCTTGGCTAATGGATTGCCAGTTTCAGAAGAGGTGGACATGGCTAGTGTTGAGCTT ATGAAGGCCCCACCTCTTTCAAAGAAGCGAATTTTTCTGCTGATTGGTGTTTTCTCGACT GGAAACAACTTCAAGCGTCGGATGGCTTTGAGGCGAACATGGATGCAATATGAGGCTGTC CGTTTAGGAGAAGTAGCCGTACGGTTTTTTACTGGTCTTCATAAGAATGAGCAAGTTAAT ATGGAAATACTGAAAGAAGCTCAGATGTATGGTGATATCCAATTTATGCCGTTTGTTGAC TATTATACCTTGATTACACTGAAGACCATTGCCATTTGCATGTTTGGGACCAAAGTTGTT CCTGCAAAGTACATCATGAAAACAGATGATGATGCTTTTGTTAGGATTGATGAAGTCATC TCAAGCCTGAAGAAGAGTGACCCTCATGGACTTCTGTATGGTCTTATTTCTTTCCAGTCT TCACCACATAGAAACAAGGATAGCAAATGGTTCATCAGTCCAAAGGAATGGCCTGTTGAA GCATATCCACCATGGGCTCATGGCCCTGGATATATAGTCTCAAGGGACATTGCAAAGTTT ATTGTTCATGGTCATCAAGAACGAACTCTTCAGTTATTCAAACTTGAAGATGTGGCAATG GGTATCTGGATACAACAGTACAAAAACAGTGGCCAGAAAGTAAATTATGTGAATGATGAC CGCTTCTATAGCGAAGGATGTGACTCCGATTATGTGCTTGCCCACTATCAGAGCCCGAGG CTTATGATGTGTTTGTGGGAGAAGCTTCAAAAGGAGTATCAGCCGGTATGTTGTGAATAG

Peptide Sequence

PEP ID	Os01t0328900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:12667369:12672739:-1 gene:Os01g0328900 transcript:Os01t0328900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl transferase, family 31 domain containing protein. (Os01t0328900-01)
Sequence	MRKCTGVLLILTLAVLLLLLSPSPSTAPPPAATAAGGPAARLLPTLPGLSRLYPPPANST AHHSWRLLRPLLLRSDALPGTAAGVLEAADAWRNLTLAVAASAAGGKDGRRQGDLDVSCR SSVEGDLGGVGARGVKIPCGLAEGSAVTVVGVPKPGAAWFRVEMVGGGGEVVVSVNVSLG VAEMVVEQSSWTREEGWGLSERCPPVGDADRNSSSLLSLVDGLVRCNQQAGVSGLQGRNN TMANVTANEHENEKRPKGRANFGGSFSIIEGEPFTATLWAGAEGFHMTVNGRHDTSFAYR ERLEPWSVAEVKVSGDLELLSVLANGLPVSEEVDMASVELMKAPPLSKKRIFLLIGVFST GNNFKRRMALRRTWMQYEAVRLGEVAVRFFTGLHKNEQVNMEILKEAQMYGDIQFMPFVD YYTLITLKTIAICMFGTKVVPAKYIMKTDDDAFVRIDEVISSLKKSDPHGLLYGLISFQS SPHRNKDSKWFISPKEWPVEAYPPWAHGPGYIVSRDIAKFIVHGHQERTLQLFKLEDVAM GIWIQQYKNSGQKVNYVNDDRFYSEGCDSDYVLAHYQSPRLMMCLWEKLQKEYQPVCCE

Transcript Sequence

Transcript ID	Os01t0328900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:12667369:12672739:-1 gene:Os01g0328900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl transferase, family 31 domain containing protein. (Os01t0328900-01)
Sequence	GCCCATTTGTCCGAAGAGCTCCTCCGGCGAGTCCCCAACAACCAGTGCTCGCCGCCGATG AGGAAGTGCACCGGCGTGCTGCTCATCCTGACCCTCGCCGTCCTCCTCCTCCTCCTCTCC CCGTCACCCTCCACCGCGCCTCCGCCCGCCGCCACCGCCGCCGGCGGCCCAGCGGCCCGC CTCCTCCCCACCCTCCCGGGCCTCTCCCGCCTCTACCCTCCCCCGGCCAACTCCACCGCC CACCACTCCTGGCGCCTCCTCCGCCCCCTCCTCCTCCGCTCCGACGCGCTCCCGGGCACC GCCGCGGGAGTCCTCGAGGCCGCCGACGCATGGCGCAACCTCACCCTCGCCGTCGCGGCA TCGGCGGCCGGCGGCAAGGACGGGCGGCGCCAGGGAGACCTCGATGTGAGCTGCCGGTCG TCCGTGGAAGGGGATCTGGGCGGCGTGGGCGCCCGGGGCGTCAAGATCCCGTGCGGGCTC GCGGAGGGCTCCGCGGTGACGGTGGTCGGGGTGCCCAAGCCCGGGGCGGCCTGGTTCCGG GTGGAGATGGTGGGGGGCGGCGGCGAGGTGGTGGTCTCCGTCAATGTGAGCTTGGGAGTC GCCGAGATGGTGGTGGAGCAGAGCTCCTGGACGCGCGAGGAGGGGTGGGGATTGTCGGAG CGGTGTCCTCCGGTTGGTGATGCCGATCGCAATAGCAGCTCACTGCTTAGTCTAGTGGAT GGGCTTGTTCGTTGCAATCAGCAAGCGGGTGTCAGTGGCCTTCAGGGGAGGAACAATACA ATGGCAAATGTTACTGCAAACGAGCATGAAAATGAGAAAAGGCCAAAAGGACGTGCAAAT TTTGGTGGTAGTTTTTCTATTATTGAAGGGGAGCCTTTTACAGCAACATTATGGGCTGGT GCAGAAGGGTTCCATATGACAGTAAATGGAAGGCATGATACGTCATTTGCATACAGAGAG AGGCTGGAGCCATGGTCTGTAGCAGAAGTTAAGGTTTCTGGTGATCTGGAGCTCCTGTCA GTCTTGGCTAATGGATTGCCAGTTTCAGAAGAGGTGGACATGGCTAGTGTTGAGCTTATG AAGGCCCCACCTCTTTCAAAGAAGCGAATTTTTCTGCTGATTGGTGTTTTCTCGACTGGA AACAACTTCAAGCGTCGGATGGCTTTGAGGCGAACATGGATGCAATATGAGGCTGTCCGT TTAGGAGAAGTAGCCGTACGGTTTTTTACTGGTCTTCATAAGAATGAGCAAGTTAATATG GAAATACTGAAAGAAGCTCAGATGTATGGTGATATCCAATTTATGCCGTTTGTTGACTAT TATACCTTGATTACACTGAAGACCATTGCCATTTGCATGTTTGGGACCAAAGTTGTTCCT GCAAAGTACATCATGAAAACAGATGATGATGCTTTTGTTAGGATTGATGAAGTCATCTCA AGCCTGAAGAAGAGTGACCCTCATGGACTTCTGTATGGTCTTATTTCTTTCCAGTCTTCA CCACATAGAAACAAGGATAGCAAATGGTTCATCAGTCCAAAGGAATGGCCTGTTGAAGCA TATCCACCATGGGCTCATGGCCCTGGATATATAGTCTCAAGGGACATTGCAAAGTTTATT GTTCATGGTCATCAAGAACGAACTCTTCAGTTATTCAAACTTGAAGATGTGGCAATGGGT ATCTGGATACAACAGTACAAAAACAGTGGCCAGAAAGTAAATTATGTGAATGATGACCGC TTCTATAGCGAAGGATGTGACTCCGATTATGTGCTTGCCCACTATCAGAGCCCGAGGCTT ATGATGTGTTTGTGGGAGAAGCTTCAAAAGGAGTATCAGCCGGTATGTTGTGAATAGTTT CTGCATCAGCGCCAACAATAGCGACAGGTAGTGAAGTCTCAAGTTGTGGTAGGCTAGTTT TCTTGTTGTTGTACAATGTATTGCCACGATTGTTTTGTTCGATGGCAAGTTTGTTGGGGA TCAATAGGTTTGGTTTTGTAGAGGAAAATATTGATCCATGTATACGAAATTACGAGCTGG AAGACAAAAAAATGTTTTACAATGGATCTCCAACTGTTCTGGATGATTCCATTC