Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0327100-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:12568431:12569866:1 gene:Os01g0327100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:class III peroxidase 15 description:Haem peroxidase family protein. (Os01t0327100-01);Similar to Peroxidase 8. (Os01t0327100-02)
Sequence	TCAGTGCTGATCTTCTCGCCGAACGGCACGGCGGAGCGCGACGCGGCGCCGAACAACCCC AGCCTCCGGGGTTTCGAGGTGATCGACGCCGCCAAGGCCGCCGTCGAGGCGGCGTGCCCG CGCACCGTCTCCTGCGCCGACATCCTCGCCTTCGCCGCCCGCGACAGCGTCAACCTCACC GGCAACTCCTTCTACCAGGTCCCCGCCGGCCGCCGCGACGGCAACGTCTCCATCGACACC GACGCCTTCACGCTCCCCGGGCCAAACCTCACGGCGACGCAGCTCGTCGACGGCTTCAAG CTCAGGAACCTGACCGCCGAGGAGATGGTCATCCTCTCCGGCTCCCACACCATCGGCCGC TCGCACTGCGCCTCCTTCCTCTTCAAGAACCGTGAACGTTTGGCGAATGGGACGATTAGC CCGGCGTACCAGGCGCTGCTGGAGGCGCTGTGCCCGCCGACGACGGGGCGGTTCACGCCG ATCACGACGGAGATCGACGTGAGCACGCCGGCGACGCTGGACAACAACTACTACAAGCTG CTGCCGCTCAACCTGGGCCTCCACTTCTCCGACGACCAGCTCATCCGCAACGCCACGCTC CTCCCCTTCGTCGACGCCTTCGCCGCCAACGAGACGCTGTGGAAGGAGAAGTTCGTCGCC GCCATGATCAAGATGGGCAACATCGACGTGCTCACCGGCGCCCGGGGGGAGATCCGGCTC AACTGCAGCGCCGTCAACCCGTCCTCGTCGTCGTCGTCGTCCTCCGCCGGGAGGATGATC GAGACCGTCTTCCCCGGCGCCGGCGGTGAGGTCGCCGCGAGCTAA

Peptide Sequence

PEP ID	Os01t0327100-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:12568431:12569866:1 gene:Os01g0327100 transcript:Os01t0327100-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:class III peroxidase 15 description:Haem peroxidase family protein. (Os01t0327100-01);Similar to Peroxidase 8. (Os01t0327100-02)
Sequence	SVLIFSPNGTAERDAAPNNPSLRGFEVIDAAKAAVEAACPRTVSCADILAFAARDSVNLT GNSFYQVPAGRRDGNVSIDTDAFTLPGPNLTATQLVDGFKLRNLTAEEMVILSGSHTIGR SHCASFLFKNRERLANGTISPAYQALLEALCPPTTGRFTPITTEIDVSTPATLDNNYYKL LPLNLGLHFSDDQLIRNATLLPFVDAFAANETLWKEKFVAAMIKMGNIDVLTGARGEIRL NCSAVNPSSSSSSSSAGRMIETVFPGAGGEVAAS

Transcript Sequence

Transcript ID	Os01t0327100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:12568431:12569866:1 gene:Os01g0327100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:class III peroxidase 15 description:Haem peroxidase family protein. (Os01t0327100-01);Similar to Peroxidase 8. (Os01t0327100-02)
Sequence	ATCAGTGCTGATCTTCTCGCCGAACGGCACGGCGGAGCGCGACGCGGCGCCGAACAACCC CAGCCTCCGGGGTTTCGAGGTGATCGACGCCGCCAAGGCCGCCGTCGAGGCGGCGTGCCC GCGCACCGTCTCCTGCGCCGACATCCTCGCCTTCGCCGCCCGCGACAGCGTCAACCTCAC CGGCAACTCCTTCTACCAGGTCCCCGCCGGCCGCCGCGACGGCAACGTCTCCATCGACAC CGACGCCTTCACGCTCCCCGGGCCAAACCTCACGGCGACGCAGCTCGTCGACGGCTTCAA GCTCAGGAACCTGACCGCCGAGGAGATGGTCATCCTCTCCGGCTCCCACACCATCGGCCG CTCGCACTGCGCCTCCTTCCTCTTCAAGAACCGTGAACGTTTGGCGAATGGGACGATTAG CCCGGCGTACCAGGCGCTGCTGGAGGCGCTGTGCCCGCCGACGACGGGGCGGTTCACGCC GATCACGACGGAGATCGACGTGAGCACGCCGGCGACGCTGGACAACAACTACTACAAGCT GCTGCCGCTCAACCTGGGCCTCCACTTCTCCGACGACCAGCTCATCCGCAACGCCACGCT CCTCCCCTTCGTCGACGCCTTCGCCGCCAACGAGACGCTGTGGAAGGAGAAGTTCGTCGC CGCCATGATCAAGATGGGCAACATCGACGTGCTCACCGGCGCCCGGGGGGAGATCCGGCT CAACTGCAGCGCCGTCAACCCGTCCTCGTCGTCGTCGTCGTCCTCCGCCGGGAGGATGAT CGAGACCGTCTTCCCCGGCGCCGGCGGTGAGGTCGCCGCGAGCTAAGCTATACCCTTGCT GACCATGTAATATACGTCATATATATGATGATAATGTAAAATTAATAATGCATGACACGC ACTTGCACTGTGTGTTGTACGGCCAGGGCAAGTGTGGTTGGTTGATGAAGGCTTTGTTTG CACCTACTTGATGTGTGTAGTGACTCTGCCATGAACGATGCACGTATACAAGTAT