Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0323300-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:12344403:12350966:1 gene:Os01g0323300 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-binding, CRM domain domain containing protein. (Os01t0323300-00)
Sequence

ATGTCGCCGCCGCCGCCGCAGCGGCCATCCCCCTCCCGCGCAGGCCGCGCCAACCTCTTC
TCGTCCCCGCCGCCTCCCCTCCCCAACTGCTACGACCCCAAGCACCGCCGCCCCGCGCCG
CCGCCTCTCCCCTCCGCCCGTCGCCTCCCCAGCAACCGCCGCCGCCGCCACGACCAGCCT
CCGAATCCGACCACCGGCAATGGCGGGAACCCCGCCTTCCGCGCGCCGCACCTCCGCACC
GCCTACCGCAAGCCCGTCCCACCCGTGGCGGCGGCGGGGGAGGGCGAGGCGCTCCTCGCC
GCCGACGCCAGCGACGCCGCCGACGGGCGGGCCGTGGTGGTGGGGCCGTCGGGGCTGTCG
TTCCGGCTCCCGGGCGCGCCGTTCGACTTCCGGTTCAGCTACTCCGAGTGCCCCCGCGCC
CCGCCGGTGGCCATCCGGGAGCCCGCGTTCCTGCCGTTCGCGCCGCCGACGATGCCCCGG
CCGTGGACGGGGAAGGCGCCGCTGCTGACCAAGGAGGAGAAGGCGCGGCGGCGGGGCGTG
CGGCTGCACACCCCGCTCGGGGAGGAGGCGCCCAGGACGGTGAGCGCGCACGGGATCATG
ATGGAGGTGAGGGGGAGGAGGAAGCTGGACCTGGCCAGGGTCAGCCCCGGCGACGGCAGG
AGCAGGGAGGAGGTGCTCGGCGAGCCGCTCACCGCCGCCGAGGTGCGCGACCTCGTCAAG
CCCCACATCTCGCACAACCGCCAGCTCAACATCGGAAGGGATGGATTGACCCACAACATG
TTGGAAATGATACATTGTCATTGGAGGCGCCAGGAAATTTGCAAAGTGAGATGCCGAGGA
GTTCCAACTGTTGATATGAAGAATCTGTGCTATCACCTTGAGGAAAAATCAGGCGGAAAG
GTTATTCACCGAGTAGGTGGTGTAGTTTTCTTATACCGTGGAAGAAACTACAACCCTCGA
ACCCGGCCTCGTTATCCACTAATGCTTTGGAAGCCAGCTACTCCTGTCTATCCAAAACTT
ATACAGGAAGCCCCAGAAGGTCTTACAAAAGAGGAAGCAGATGAAATGAGAAGAAGAGGG
AAGGATCTGCTGCCAATTTGCAAATTAGCAAAAAATGGTATATACATCTATCTTGTCAGG
GATGTTCGAGATGCTTTTGAGGGAAGTGATCTGGTGAAGATTGACTGCGAGGGGTTGAAT
CCAAGTGACTACAAAAAGATTGGAGCAAAACTAAGGGATCTTGTTCCTTGTGTTCTTTTG
TCGTTTGACAATGAGCAGATATTAATGTTCAGAGGCAAGGAATGGAAGTCCAGATATCCA
AAGCCTCTGACTCTTATTCCAAAAATTCGAAAGAATAATGTTCCAATGTCATCTGATGAG
AGTAGTTCAGATGAAGCCACTGATGATGATGACCGTTTGGCAGTAAGAGAAGTACTGAGA
CCTAAAATGTTTGAACTATGGACAAATGCGATTGAGTCATCTGTGGCACTGATGTTGGAT
GATGCTGAAGTGGATGCTCTTACACCTGATTCCCTTCTTACAAGGGTAGAGGACTTCAGT
GTTACATCTCAGGTTGTCGAACATTCATTTCCAGCTGTGCTTGTGGCCAATGATGAATCA
AACCCAGATGTCCTAAATGCTGAATACACCGAAGATGAGCCTGAGACAGGTACACTTGAA
CCCCAACAACATGAGTTTACAGAATCTTCTGATGTCGCAGAGGATGATCATTTCGAAGAT
GACATGCTTAAGCGTTTGGAGTCATCAGTCCCATTGGGAGCATTACCGATCGACGCAGTG
GTAAAACAGTTGAATGATGAGTGA

Peptide Sequence

PEP ID

Os01t0323300-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:12344403:12350966:1 gene:Os01g0323300 transcript:Os01t0323300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-binding, CRM domain domain containing protein. (Os01t0323300-00)
Sequence

MSPPPPQRPSPSRAGRANLFSSPPPPLPNCYDPKHRRPAPPPLPSARRLPSNRRRRHDQP
PNPTTGNGGNPAFRAPHLRTAYRKPVPPVAAAGEGEALLAADASDAADGRAVVVGPSGLS
FRLPGAPFDFRFSYSECPRAPPVAIREPAFLPFAPPTMPRPWTGKAPLLTKEEKARRRGV
RLHTPLGEEAPRTVSAHGIMMEVRGRRKLDLARVSPGDGRSREEVLGEPLTAAEVRDLVK
PHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLCYHLEEKSGGK
VIHRVGGVVFLYRGRNYNPRTRPRYPLMLWKPATPVYPKLIQEAPEGLTKEEADEMRRRG
KDLLPICKLAKNGIYIYLVRDVRDAFEGSDLVKIDCEGLNPSDYKKIGAKLRDLVPCVLL
SFDNEQILMFRGKEWKSRYPKPLTLIPKIRKNNVPMSSDESSSDEATDDDDRLAVREVLR
PKMFELWTNAIESSVALMLDDAEVDALTPDSLLTRVEDFSVTSQVVEHSFPAVLVANDES
NPDVLNAEYTEDEPETGTLEPQQHEFTESSDVAEDDHFEDDMLKRLESSVPLGALPIDAV
VKQLNDE

Transcript Sequence

Transcript ID

Os01t0323300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:12344403:12350966:1 gene:Os01g0323300 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-binding, CRM domain domain containing protein. (Os01t0323300-00)
Sequence

CTCCTCGTGACGTCGTCTCCTCCACTCCCTCCAGTGACCAACTGACCACTTCCCGCCATG
TCGCCGCCGCCGCCGCAGCGGCCATCCCCCTCCCGCGCAGGCCGCGCCAACCTCTTCTCG
TCCCCGCCGCCTCCCCTCCCCAACTGCTACGACCCCAAGCACCGCCGCCCCGCGCCGCCG
CCTCTCCCCTCCGCCCGTCGCCTCCCCAGCAACCGCCGCCGCCGCCACGACCAGCCTCCG
AATCCGACCACCGGCAATGGCGGGAACCCCGCCTTCCGCGCGCCGCACCTCCGCACCGCC
TACCGCAAGCCCGTCCCACCCGTGGCGGCGGCGGGGGAGGGCGAGGCGCTCCTCGCCGCC
GACGCCAGCGACGCCGCCGACGGGCGGGCCGTGGTGGTGGGGCCGTCGGGGCTGTCGTTC
CGGCTCCCGGGCGCGCCGTTCGACTTCCGGTTCAGCTACTCCGAGTGCCCCCGCGCCCCG
CCGGTGGCCATCCGGGAGCCCGCGTTCCTGCCGTTCGCGCCGCCGACGATGCCCCGGCCG
TGGACGGGGAAGGCGCCGCTGCTGACCAAGGAGGAGAAGGCGCGGCGGCGGGGCGTGCGG
CTGCACACCCCGCTCGGGGAGGAGGCGCCCAGGACGGTGAGCGCGCACGGGATCATGATG
GAGGTGAGGGGGAGGAGGAAGCTGGACCTGGCCAGGGTCAGCCCCGGCGACGGCAGGAGC
AGGGAGGAGGTGCTCGGCGAGCCGCTCACCGCCGCCGAGGTGCGCGACCTCGTCAAGCCC
CACATCTCGCACAACCGCCAGCTCAACATCGGAAGGGATGGATTGACCCACAACATGTTG
GAAATGATACATTGTCATTGGAGGCGCCAGGAAATTTGCAAAGTGAGATGCCGAGGAGTT
CCAACTGTTGATATGAAGAATCTGTGCTATCACCTTGAGGAAAAATCAGGCGGAAAGGTT
ATTCACCGAGTAGGTGGTGTAGTTTTCTTATACCGTGGAAGAAACTACAACCCTCGAACC
CGGCCTCGTTATCCACTAATGCTTTGGAAGCCAGCTACTCCTGTCTATCCAAAACTTATA
CAGGAAGCCCCAGAAGGTCTTACAAAAGAGGAAGCAGATGAAATGAGAAGAAGAGGGAAG
GATCTGCTGCCAATTTGCAAATTAGCAAAAAATGGTATATACATCTATCTTGTCAGGGAT
GTTCGAGATGCTTTTGAGGGAAGTGATCTGGTGAAGATTGACTGCGAGGGGTTGAATCCA
AGTGACTACAAAAAGATTGGAGCAAAACTAAGGGATCTTGTTCCTTGTGTTCTTTTGTCG
TTTGACAATGAGCAGATATTAATGTTCAGAGGCAAGGAATGGAAGTCCAGATATCCAAAG
CCTCTGACTCTTATTCCAAAAATTCGAAAGAATAATGTTCCAATGTCATCTGATGAGAGT
AGTTCAGATGAAGCCACTGATGATGATGACCGTTTGGCAGTAAGAGAAGTACTGAGACCT
AAAATGTTTGAACTATGGACAAATGCGATTGAGTCATCTGTGGCACTGATGTTGGATGAT
GCTGAAGTGGATGCTCTTACACCTGATTCCCTTCTTACAAGGGTAGAGGACTTCAGTGTT
ACATCTCAGGTTGTCGAACATTCATTTCCAGCTGTGCTTGTGGCCAATGATGAATCAAAC
CCAGATGTCCTAAATGCTGAATACACCGAAGATGAGCCTGAGACAGGTACACTTGAACCC
CAACAACATGAGTTTACAGAATCTTCTGATGTCGCAGAGGATGATCATTTCGAAGATGAC
ATGCTTAAGCGTTTGGAGTCATCAGTCCCATTGGGAGCATTACCGATCGACGCAGTGGTA
AAACAGTTGAATGATGAGTGAATTA