Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0319400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:12157459:12161767:-1 gene:Os01g0319400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF247, plant domain containing protein. (Os01t0319400-01)
Sequence	TCTGATCAGAGGAGATCGACGACGACGACGACGACGACGACGGCGAGGCAGGAGGACACG GTGCGCGTGAACATCGAGACGATGCTGGAGCATCTGACCACGCCGGCGGCGAGGCTGGGC GACGGCTACTCCATCTACCGTGTCCCGGCGAACGTCGACAGGAAGCACTACGAGCCGAGG CTGGTCTCCGTCGGCCCGTACCACCGGAGCAAGCACCACCTCAGCGCCATGGAGGACCGG AAGCGCCTCTACCTCCTCCGGTTCCTCGACGACGGTGGCGAGAGCGGCCACCGCCGCGGA CTTCTGCTCCAGGACTGCATCGACAGGGTGCGCGAGCTCGAGCCGCGGGCGCGCGCGTGC TACTTCGAGAGCCCGGCCACCGGTGACGACGGGGAAGACGACGACGGCGACATGTTCGTC GAAATGCTCCTCCTCGACGGCTGCTTCGTGGTCCAGTTCTTCATCCAGTGGTTCTCCGGC GTCGCCGACCCCATCTTCAACGTCGGCTGGAACCTCCCGCTGCTGCACACCGACCTGCTC ATGCTCGAGAACCAGATCCCCTACTTCATCCTCCTCGCGCTCTACGACGCCTACACGCAT GACGGCGACGGCGACCTCGACCGGCCGGCGCGGCGGCCCAAGCCGTCGCTGACGAGCATC ATCACCGCCTACTTCAGCCAGAAGGAAGGTCGGCAGCCGGCGGCGACGGAGACGGCGCAG CTGCAGGAGGAGGACGACATCGACCACCTCCTCCACCTCTACCACTCCACCTTCGTCAAG CCACCCGATCACCTGCCGGCGCGGCGGCACCGCCACGGCGGCGGCGGCAGCAGACCGCCG AGGACGATCCGCTGCGCCAAGGAGCTGGCCATGCACGGGGTGAGGTTCGTGCCCAAGGTC GGGACGAGCAACATCCTCGACGTCGCGTTCCACGACGGCGTGTTCGAGATCCCGCGCGTC GCCGTCGACGACTCCACCTGCACCCGCTTCATGAACCTCGCCGCCTTTGAGCAGTGCCGC GGCGGCGACGCCGAGACACCGGCGGCGGGGAAGCACCTGACCAGCTACGTGGTGCTGATG GACTACCTGATCAACACGGCGGAGGACGTGGTGATCCTGGAGCGCGCCGACGTGATGGAG AACAATCTGGCGAACGAGGAGGCGGCGGCGGCGTTCTTCAACCAGCTCCGCGTCTGCTCC TACATCGACTACGACGACCACTACCTGGCGCCGGTGTACCGCGACGTCGACGCCTTCTGC CGCCGCAAGTGGCCCAAGTACAAGGCCAAATTCCGCCGGGACTACCTCAACAGCCCGTGG GCGATCGTCGGCTTCTGCTTCGCCACCACCTTCGCCGTCGTCACCTTCTTCAACACCATC GTCAACATACTCAAGACGTTCTTCCATGTCTTGCATTGA

Peptide Sequence

PEP ID	Os01t0319400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:12157459:12161767:-1 gene:Os01g0319400 transcript:Os01t0319400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF247, plant domain containing protein. (Os01t0319400-01)
Sequence	SDQRRSTTTTTTTTARQEDTVRVNIETMLEHLTTPAARLGDGYSIYRVPANVDRKHYEPR LVSVGPYHRSKHHLSAMEDRKRLYLLRFLDDGGESGHRRGLLLQDCIDRVRELEPRARAC YFESPATGDDGEDDDGDMFVEMLLLDGCFVVQFFIQWFSGVADPIFNVGWNLPLLHTDLL MLENQIPYFILLALYDAYTHDGDGDLDRPARRPKPSLTSIITAYFSQKEGRQPAATETAQ LQEEDDIDHLLHLYHSTFVKPPDHLPARRHRHGGGGSRPPRTIRCAKELAMHGVRFVPKV GTSNILDVAFHDGVFEIPRVAVDDSTCTRFMNLAAFEQCRGGDAETPAAGKHLTSYVVLM DYLINTAEDVVILERADVMENNLANEEAAAAFFNQLRVCSYIDYDDHYLAPVYRDVDAFC RRKWPKYKAKFRRDYLNSPWAIVGFCFATTFAVVTFFNTIVNILKTFFHVLH

Transcript Sequence

Transcript ID	Os01t0319400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:12157459:12161767:-1 gene:Os01g0319400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF247, plant domain containing protein. (Os01t0319400-01)
Sequence	ATACTTCTTCTTCCTCGCCGATGAGATCCCTCCCCCAAGCTAGCACGCACGCAAACTAGG CCTTTCTACCACATCTCTCCAACAGTTACAGCCCCATGGATCCATAGCCAGTTAGCCACG ACCCATATATTGTGTCTTCCTAAAGGAGTTCTCATCCGACCTGTGGTATCGCAGAAACCT CATCTCCACCTTCCATCGCCATAGCCAGAGTCGCCGGAGGAGTTGGAGAAGAAGAAGAAG AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTTTGTCACCTGAGGGGTGATCTGATCA GAGGAGATCGACGACGACGACGACGACGACGACGGCGAGGCAGGAGGACACGGTGCGCGT GAACATCGAGACGATGCTGGAGCATCTGACCACGCCGGCGGCGAGGCTGGGCGACGGCTA CTCCATCTACCGTGTCCCGGCGAACGTCGACAGGAAGCACTACGAGCCGAGGCTGGTCTC CGTCGGCCCGTACCACCGGAGCAAGCACCACCTCAGCGCCATGGAGGACCGGAAGCGCCT CTACCTCCTCCGGTTCCTCGACGACGGTGGCGAGAGCGGCCACCGCCGCGGACTTCTGCT CCAGGACTGCATCGACAGGGTGCGCGAGCTCGAGCCGCGGGCGCGCGCGTGCTACTTCGA GAGCCCGGCCACCGGTGACGACGGGGAAGACGACGACGGCGACATGTTCGTCGAAATGCT CCTCCTCGACGGCTGCTTCGTGGTCCAGTTCTTCATCCAGTGGTTCTCCGGCGTCGCCGA CCCCATCTTCAACGTCGGCTGGAACCTCCCGCTGCTGCACACCGACCTGCTCATGCTCGA GAACCAGATCCCCTACTTCATCCTCCTCGCGCTCTACGACGCCTACACGCATGACGGCGA CGGCGACCTCGACCGGCCGGCGCGGCGGCCCAAGCCGTCGCTGACGAGCATCATCACCGC CTACTTCAGCCAGAAGGAAGGTCGGCAGCCGGCGGCGACGGAGACGGCGCAGCTGCAGGA GGAGGACGACATCGACCACCTCCTCCACCTCTACCACTCCACCTTCGTCAAGCCACCCGA TCACCTGCCGGCGCGGCGGCACCGCCACGGCGGCGGCGGCAGCAGACCGCCGAGGACGAT CCGCTGCGCCAAGGAGCTGGCCATGCACGGGGTGAGGTTCGTGCCCAAGGTCGGGACGAG CAACATCCTCGACGTCGCGTTCCACGACGGCGTGTTCGAGATCCCGCGCGTCGCCGTCGA CGACTCCACCTGCACCCGCTTCATGAACCTCGCCGCCTTTGAGCAGTGCCGCGGCGGCGA CGCCGAGACACCGGCGGCGGGGAAGCACCTGACCAGCTACGTGGTGCTGATGGACTACCT GATCAACACGGCGGAGGACGTGGTGATCCTGGAGCGCGCCGACGTGATGGAGAACAATCT GGCGAACGAGGAGGCGGCGGCGGCGTTCTTCAACCAGCTCCGCGTCTGCTCCTACATCGA CTACGACGACCACTACCTGGCGCCGGTGTACCGCGACGTCGACGCCTTCTGCCGCCGCAA GTGGCCCAAGTACAAGGCCAAATTCCGCCGGGACTACCTCAACAGCCCGTGGGCGATCGT CGGCTTCTGCTTCGCCACCACCTTCGCCGTCGTCACCTTCTTCAACACCATCGTCAACAT ACTCAAGACGTTCTTCCATGTCTTGCATTGATCATCCAATGATCGATATGTGCAGTGCCT TGCTCACTGCAGAGAATTATTATCTTTGTTTTAAATCTATCTATCGATCTGTTCTTCTAC CGCCATAAGTAAAAAAACATAAGACATGTATTGAAGACGTTAATCATAGACATGTCTACA TATTGCTTATTGGAGACATCTTTGCTG