Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0319000-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:12117365:12122789:1 gene:Os01g0319000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pectin acetylesterase (Fragment). (Os01t0319000-01);Similar to Pectin acetylesterase (Fragment). (Os01t0319000-02)
Sequence	ATGGCGATGATGGAGAGGATTGGGGTCACCAAGCTTCATCATCATCTTCTTCTTCTTGTT CTTCTTCTCGTCGTCGCCGCCGCCGGCGGCGGCAGCGTACAGGCGGCGGAGGAGGATGAG ATGAGCGGCCGGAGGAGGAGAAGCAGGCGGCGGCGTGCGGCGGACGTGATGGTGCCCATC ACCATCCTCAACTCCGCCGTCGACAAGGGAGCCGTGTGCATGGACGGGACGCCGCCGGCG TACCACCTGGACCCGGGCTCCGGCGGCGGCAACCGGAGCTGGGTGGTCAACCTGGAGGGC GGCGGGTGGTGCAACAACGCCCGCACGTGCCGCTTCCGCACCGCCAGCCGCCACGGCTCC TCCGACCACATGGAGCGCCGCATCGCCTTCACCGGCATCATGAGCTCCGCCGCCGCCGAC AACCCCGATTTCCACAGCTGGAACCGCGTCAAGATCCGCTACTGCGACAGCGGGTCCTTC GCCGGCGACGCCTTCAACGAGGGATTGAAGCTGCAATTCCGGGGGCAGCGCATCTGGGGG GCGGTGATCCAGCACCTGCTCGACGTCGGCATGGCCTCCGCCGAGCATGTGCTGCTCACC GGCTGCTCCGCCGGCGGCCTCGCCGCGATCCTCCACTGCGACCAGCTCCGCGCCCTCCTC CCCGCCGCCGCCACCGTCAAGTGCCTCTCCGACGGCGGCCTCTTCCTCGACGCCGTGGAC GTCGCCGGCGGCAGGAGCCTGAGGTCATACTACGGCGACGTCGTCGGCCTGCAGGCGGTG GCGCCCAACCTTCCCGAGACCTGCACCGACCATCTCGACGCCACCTCGTGCTTCTTCCCT CAGAACATAATCGACGGCATAAAGACACCCATCTTCCTGCTGAATGCGGCGTACGACGTC TGGCAGATCGAGCAGAGCCTGGCCCCTAACGCAGCTGACACCAGCGGCACCTGGCGAGTC TGCAAGTTCAACCGCGCAGCCTGCAACGCGTCTCAGCTGCAGTTCCTGCAAGGTTTCAGA GATCAGATGGTGGCAGCGGTGAGAGTCTTCTCCGAGTCGAGGAGCAACGGGCTGTTCATC AACTCGTGCTTCGCTCACTGCCAGTCCGAGCTGACGGCCACCTGGAATGGTGGCTCTCCT GCTCTCCAGAACAAGGGAATTGCAAAGTCTGTTGGTGACTGGTACTTTGGTCGAGCTGAG GTGAAGGCCATCGATTGCCCCTACCCCTGTGACAAAACATGCCACAACATCATATGA

Peptide Sequence

PEP ID	Os01t0319000-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:12117365:12122789:1 gene:Os01g0319000 transcript:Os01t0319000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pectin acetylesterase (Fragment). (Os01t0319000-01);Similar to Pectin acetylesterase (Fragment). (Os01t0319000-02)
Sequence	MAMMERIGVTKLHHHLLLLVLLLVVAAAGGGSVQAAEEDEMSGRRRRSRRRRAADVMVPI TILNSAVDKGAVCMDGTPPAYHLDPGSGGGNRSWVVNLEGGGWCNNARTCRFRTASRHGS SDHMERRIAFTGIMSSAAADNPDFHSWNRVKIRYCDSGSFAGDAFNEGLKLQFRGQRIWG AVIQHLLDVGMASAEHVLLTGCSAGGLAAILHCDQLRALLPAAATVKCLSDGGLFLDAVD VAGGRSLRSYYGDVVGLQAVAPNLPETCTDHLDATSCFFPQNIIDGIKTPIFLLNAAYDV WQIEQSLAPNAADTSGTWRVCKFNRAACNASQLQFLQGFRDQMVAAVRVFSESRSNGLFI NSCFAHCQSELTATWNGGSPALQNKGIAKSVGDWYFGRAEVKAIDCPYPCDKTCHNII

Transcript Sequence

Transcript ID	Os01t0319000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:12117365:12122789:1 gene:Os01g0319000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pectin acetylesterase (Fragment). (Os01t0319000-01);Similar to Pectin acetylesterase (Fragment). (Os01t0319000-02)
Sequence	ATTCTCTCCTTAATTTCTTGAATTGCTATCCGATCCTGAGCAATATATGTCCCTAGCTAG CTAGCTGGGCGTCCGCCATAATTTGCTGCCAATAATAATTAGCCCCATATATCCTTGTAG CTAGGTGAATCATCCCCTTGATATGCCTTGTTAAATATGTAGCTCCGATTTAAGCTCTCT TGCCCATTTTTTTTTCAGAGTTTATAGTTTCATTTTGATTCTTCCGCTCTCTGCTAGCTT CCACACACCAAGTTCATCAGCCAATTTCTTCCTGACGAGAAGGCCGTGTAAGAATTTTAG TGAAGTGAGTGTCTTTTTTGTTTTTCGATTGGTCGATCGAGTGCTGGTACAAGCTAGAGG ATGGCGATGATGGAGAGGATTGGGGTCACCAAGCTTCATCATCATCTTCTTCTTCTTGTT CTTCTTCTCGTCGTCGCCGCCGCCGGCGGCGGCAGCGTACAGGCGGCGGAGGAGGATGAG ATGAGCGGCCGGAGGAGGAGAAGCAGGCGGCGGCGTGCGGCGGACGTGATGGTGCCCATC ACCATCCTCAACTCCGCCGTCGACAAGGGAGCCGTGTGCATGGACGGGACGCCGCCGGCG TACCACCTGGACCCGGGCTCCGGCGGCGGCAACCGGAGCTGGGTGGTCAACCTGGAGGGC GGCGGGTGGTGCAACAACGCCCGCACGTGCCGCTTCCGCACCGCCAGCCGCCACGGCTCC TCCGACCACATGGAGCGCCGCATCGCCTTCACCGGCATCATGAGCTCCGCCGCCGCCGAC AACCCCGATTTCCACAGCTGGAACCGCGTCAAGATCCGCTACTGCGACAGCGGGTCCTTC GCCGGCGACGCCTTCAACGAGGGATTGAAGCTGCAATTCCGGGGGCAGCGCATCTGGGGG GCGGTGATCCAGCACCTGCTCGACGTCGGCATGGCCTCCGCCGAGCATGTGCTGCTCACC GGCTGCTCCGCCGGCGGCCTCGCCGCGATCCTCCACTGCGACCAGCTCCGCGCCCTCCTC CCCGCCGCCGCCACCGTCAAGTGCCTCTCCGACGGCGGCCTCTTCCTCGACGCCGTGGAC GTCGCCGGCGGCAGGAGCCTGAGGTCATACTACGGCGACGTCGTCGGCCTGCAGGCGGTG GCGCCCAACCTTCCCGAGACCTGCACCGACCATCTCGACGCCACCTCGTGCTTCTTCCCT CAGAACATAATCGACGGCATAAAGACACCCATCTTCCTGCTGAATGCGGCGTACGACGTC TGGCAGATCGAGCAGAGCCTGGCCCCTAACGCAGCTGACACCAGCGGCACCTGGCGAGTC TGCAAGTTCAACCGCGCAGCCTGCAACGCGTCTCAGCTGCAGTTCCTGCAAGGTTTCAGA GATCAGATGGTGGCAGCGGTGAGAGTCTTCTCCGAGTCGAGGAGCAACGGGCTGTTCATC AACTCGTGCTTCGCTCACTGCCAGTCCGAGCTGACGGCCACCTGGAATGGTGGCTCTCCT GCTCTCCAGAACAAGGGAATTGCAAAGTCTGTTGGTGACTGGTACTTTGGTCGAGCTGAG GTGAAGGCCATCGATTGCCCCTACCCCTGTGACAAAACATGCCACAACATCATATGACAT CATGTACTGACGTTTACTCGTCTCGACCGAATGGAGTGACACACATTTTTGCCTCG