Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0317800-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:12067684:12068949:1 gene:Os01g0317800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase family protein. (Os01t0317800-01)
Sequence

ATGGCGCATCCGGTGGCTGAGGCCGACGAGAAGAGCCCCTTCGGCCGCCTCACCGCGGAG
GAGTTCTACGCGCGCCACGGCGTGCTGCACACCTCCTCCACCTTCGTCAACCCGCGCGGC
CTCCGCATCTTCACCCAGCGCTGGGTCCCCGCGGGGGGCGACGCGCCCCTCCTCGGCGCC
ATCGCCGTCGTCCACGGCTTCACGGGGGAGTCCAGCTGGACGGTGCAGCTCACCGCCGTC
CACTTCGCCAAGGCCGGGTTCGCCGTCGCCGCCGTCGACCACCAGGGCCACGGCTTCTCC
GAGGGCCTACAGGGGCACATCCCCGACATCGTCCCCGTGCTCGAGGACTGCGAGGCCGCG
TTCGCCCCGTTCCGCGCCGACTACCCGCCGCCGCTTCCGTGCTTCCTCTACGGGGAGTCC
CTCGGCGGCGCCATCGCGCTGCTGCTCCACCTCCGGGACAAGGAGCGGTGGCGCGACGGG
GCGGTGCTCAACGGCGCCATGTGCGGGGTCAGCCCCAGGTTCATGCCCCCCTGGCCGCTC
GAGCACCTGCTGTGGGCGGCGGCGGCCGTGGCGCCCACGTGGCGGCTCGCCTTCACCCGG
GGGAACATCCCCGACCGCTCCTTCAAGGTGCCGTGGAAGCGCGCCCTGGCGGTGGCGAGC
CCGCGCCGCACCACGGCGCCGCCCCGCGCCGCCACGGCGCTGGAGCTCCTCCGCGTGTGC
CGCGAGCTCCAGTCCCGGTTCGAGGAGGTGGAGCTCCCGCTCCTGGTCGTCCACGGCGGC
GAGGACACCGTGTGCGACCCCGGGTGCGCGGAGGAGCTCCACCGCCGCGCCGGGAGCAAG
GACAAGACGCTGCGGGTGTACCCGGGGATGTGGCACCAGCTGGTCGGCGAGCCCGAGGAG
AACGTCGACAAGGTGTTCGGCGACGTCCTCGACTGGCTCAAGTCCCACGCCGCCGCCGCT
GCCGCCGCGCGTGGCGAGGGGCAGCAGTAG

Peptide Sequence

PEP ID

Os01t0317800-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:12067684:12068949:1 gene:Os01g0317800 transcript:Os01t0317800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase family protein. (Os01t0317800-01)
Sequence

MAHPVAEADEKSPFGRLTAEEFYARHGVLHTSSTFVNPRGLRIFTQRWVPAGGDAPLLGA
IAVVHGFTGESSWTVQLTAVHFAKAGFAVAAVDHQGHGFSEGLQGHIPDIVPVLEDCEAA
FAPFRADYPPPLPCFLYGESLGGAIALLLHLRDKERWRDGAVLNGAMCGVSPRFMPPWPL
EHLLWAAAAVAPTWRLAFTRGNIPDRSFKVPWKRALAVASPRRTTAPPRAATALELLRVC
RELQSRFEEVELPLLVVHGGEDTVCDPGCAEELHRRAGSKDKTLRVYPGMWHQLVGEPEE
NVDKVFGDVLDWLKSHAAAAAAARGEGQQ

Transcript Sequence

Transcript ID

Os01t0317800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:12067684:12068949:1 gene:Os01g0317800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase family protein. (Os01t0317800-01)
Sequence

ACTACAACGCCAAAGCACTGCACTGCACAAGCAGCTTCCTCGCCTTCGCATCTACTACTC
CCCCCAAAATGGCGCATCCGGTGGCTGAGGCCGACGAGAAGAGCCCCTTCGGCCGCCTCA
CCGCGGAGGAGTTCTACGCGCGCCACGGCGTGCTGCACACCTCCTCCACCTTCGTCAACC
CGCGCGGCCTCCGCATCTTCACCCAGCGCTGGGTCCCCGCGGGGGGCGACGCGCCCCTCC
TCGGCGCCATCGCCGTCGTCCACGGCTTCACGGGGGAGTCCAGCTGGACGGTGCAGCTCA
CCGCCGTCCACTTCGCCAAGGCCGGGTTCGCCGTCGCCGCCGTCGACCACCAGGGCCACG
GCTTCTCCGAGGGCCTACAGGGGCACATCCCCGACATCGTCCCCGTGCTCGAGGACTGCG
AGGCCGCGTTCGCCCCGTTCCGCGCCGACTACCCGCCGCCGCTTCCGTGCTTCCTCTACG
GGGAGTCCCTCGGCGGCGCCATCGCGCTGCTGCTCCACCTCCGGGACAAGGAGCGGTGGC
GCGACGGGGCGGTGCTCAACGGCGCCATGTGCGGGGTCAGCCCCAGGTTCATGCCCCCCT
GGCCGCTCGAGCACCTGCTGTGGGCGGCGGCGGCCGTGGCGCCCACGTGGCGGCTCGCCT
TCACCCGGGGGAACATCCCCGACCGCTCCTTCAAGGTGCCGTGGAAGCGCGCCCTGGCGG
TGGCGAGCCCGCGCCGCACCACGGCGCCGCCCCGCGCCGCCACGGCGCTGGAGCTCCTCC
GCGTGTGCCGCGAGCTCCAGTCCCGGTTCGAGGAGGTGGAGCTCCCGCTCCTGGTCGTCC
ACGGCGGCGAGGACACCGTGTGCGACCCCGGGTGCGCGGAGGAGCTCCACCGCCGCGCCG
GGAGCAAGGACAAGACGCTGCGGGTGTACCCGGGGATGTGGCACCAGCTGGTCGGCGAGC
CCGAGGAGAACGTCGACAAGGTGTTCGGCGACGTCCTCGACTGGCTCAAGTCCCACGCCG
CCGCCGCTGCCGCCGCGCGTGGCGAGGGGCAGCAGTAGTTCGGTCGGTCACGCGTGCCGC
GTGCTTGGGTAATTCATGGCGGATTCAAAGCAAAAGTACGGGGGCGCAATAAAAGGTTGT
GGAGTTGATTGGTGAGACGAGATCGATCTGGTCCCGGTGTATCTCCGTCTCTGCGTGTGG
CCATGTTCCATCTCCGTGTCTCTCTGCTCGTATTAGTCCATGAATTGAATGCCAAAAAAA
TTTGCC