Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0312800-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:11756949:11759565:1 gene:Os01g0312800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glycoside hydrolase OsGH9B2 description:Similar to CEL4=CELLULASE 4 (Fragment). (Os01t0312800-01)
Sequence	ATGGCTCTCCTCCGCTGCCTCTTCCTCCTCGCCGTCCTTCTTCCCCACCGCAATGCCGCC GTCGTCGCCGCCGCGTCGCCGCACCACGGCCCCGCGCCGCACGACTACAGGGACGCGCTC ACCAAGTCCATCCTCTTCTTCGAGGGCCAGCGCTCCGGGAAGCTGCCGCCGTCGCAGCGC GTCTCCTGGCGGGGTGACTCCGGCCTCTCCGACGGCTCCTCCATCAAGGTGGACTTGGTG GGAGGGTACTACGACGCCGGCGACAACATGAAGTTCGGGTTCCCGCTGGCGTTCAGCATG ACGATGCTGGCGTGGAGCGTGGTGGAGTTCGGTGGACTCATGAAGGGTGAGCTCCAGCAC GCCAGGGACGCCGTCCGCTGGGGCTCCGACTACCTCCTCAAGGCCACCGCCCACCCGGAC ACCGTCTACGTCCAGGTCGGTGATGCCAACAGGGACCACGCGTGCTGGGAGCGGCCGGAG GACATGGACACACCGAGGACCGTGTACAAGGTCGACCCGAGCACCCCGGGCACCGACGTC GCGGCCGAGACCGCCGCGGCGCTCGCCGCCGCCTCGCTCGTCTTCCGCAAGTCCGACCCG GCCTACGCCAGCCGCCTCGTCGCCAGGGCCAAGAGGGTGTTTGAGTTCGCGGACAAGCAC AGGGGCACGTACAGCACCCGTCTCTCGCCATACGTCTGCCCATACTACTGCTCCTACTCC GGGTACCAGGATGAGCTGCTGTGGGGGGCGGCATGGCTACACAGGGCGACCAAGAACCCG ACGTACCTGAGCTACATCCAGATGAACGGGCAGGTGCTGGGCGCGGACGAGCAGGACAAC ACGTTCGGGTGGGACAACAAGCACGCCGGGGCGAGGATCCTGATCGCCAAGGCGTTCCTG GTGCAGAAGGTGGCGGCGCTGCACGAGTACAAGGGCCACGCCGACAGCTTCATCTGCTCC ATGGTGCCCGGCACCCCCACGGACCAGACGCAGTACACCCGCGGCGGCCTCCTCTTCAAG CTCAGCGACAGCAACATGCAGTACGTCACCTCCAGCTCCTTCCTGCTGCTCACCTACGCC AAGTACCTCGCCTTCTCCAAGACCACCGTCTCCTGCGGCGGCGCCGCCGTCACGCCGGCC CGCCTCCGCGCCATCGCGCGCCAGCAGGTGGACTACCTGCTGGGGAGCAACCCGATGGGG ATGTCGTACATGGTCGGGTACGGCGCCAAGTACCCGCGGAGGATCCACCACCGCGCGTCG TCGCTGCCGTCGGTGGCGGCGCACCCCGCCAGGATCGGCTGCTCGCAGGGGTTCACCGCG CTCTACTCCGGCGTCGCCAACCCCAACGTCCTCGTCGGCGCCGTCGTCGGAGGGCCCAAC CTGCAGGACCAGTTCCCCGACCAGCGCAGCGACCACGAGCACTCCGAGCCGGCCACCTAC ATCAACGCGCCGCTCGTCGGAGCGCTCGCCTACCTCGCCCACTCCTACGGCCAGCTCTAG

Peptide Sequence

PEP ID	Os01t0312800-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:11756949:11759565:1 gene:Os01g0312800 transcript:Os01t0312800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glycoside hydrolase OsGH9B2 description:Similar to CEL4=CELLULASE 4 (Fragment). (Os01t0312800-01)
Sequence	MALLRCLFLLAVLLPHRNAAVVAAASPHHGPAPHDYRDALTKSILFFEGQRSGKLPPSQR VSWRGDSGLSDGSSIKVDLVGGYYDAGDNMKFGFPLAFSMTMLAWSVVEFGGLMKGELQH ARDAVRWGSDYLLKATAHPDTVYVQVGDANRDHACWERPEDMDTPRTVYKVDPSTPGTDV AAETAAALAAASLVFRKSDPAYASRLVARAKRVFEFADKHRGTYSTRLSPYVCPYYCSYS GYQDELLWGAAWLHRATKNPTYLSYIQMNGQVLGADEQDNTFGWDNKHAGARILIAKAFL VQKVAALHEYKGHADSFICSMVPGTPTDQTQYTRGGLLFKLSDSNMQYVTSSSFLLLTYA KYLAFSKTTVSCGGAAVTPARLRAIARQQVDYLLGSNPMGMSYMVGYGAKYPRRIHHRAS SLPSVAAHPARIGCSQGFTALYSGVANPNVLVGAVVGGPNLQDQFPDQRSDHEHSEPATY INAPLVGALAYLAHSYGQL

Transcript Sequence

Transcript ID	Os01t0312800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:11756949:11759565:1 gene:Os01g0312800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glycoside hydrolase OsGH9B2 description:Similar to CEL4=CELLULASE 4 (Fragment). (Os01t0312800-01)
Sequence	AATGGCAGAGGCGGCAGCGAGCTAGCCAGCGGAGAGCTCCTCCAAGTGCAGAGTAGGGGT CCCTTCTCCGCCGCTCTGCTCACCATTTCCTCTCTCGTAGCCATGGCTCTCCTCCGCTGC CTCTTCCTCCTCGCCGTCCTTCTTCCCCACCGCAATGCCGCCGTCGTCGCCGCCGCGTCG CCGCACCACGGCCCCGCGCCGCACGACTACAGGGACGCGCTCACCAAGTCCATCCTCTTC TTCGAGGGCCAGCGCTCCGGGAAGCTGCCGCCGTCGCAGCGCGTCTCCTGGCGGGGTGAC TCCGGCCTCTCCGACGGCTCCTCCATCAAGGTGGACTTGGTGGGAGGGTACTACGACGCC GGCGACAACATGAAGTTCGGGTTCCCGCTGGCGTTCAGCATGACGATGCTGGCGTGGAGC GTGGTGGAGTTCGGTGGACTCATGAAGGGTGAGCTCCAGCACGCCAGGGACGCCGTCCGC TGGGGCTCCGACTACCTCCTCAAGGCCACCGCCCACCCGGACACCGTCTACGTCCAGGTC GGTGATGCCAACAGGGACCACGCGTGCTGGGAGCGGCCGGAGGACATGGACACACCGAGG ACCGTGTACAAGGTCGACCCGAGCACCCCGGGCACCGACGTCGCGGCCGAGACCGCCGCG GCGCTCGCCGCCGCCTCGCTCGTCTTCCGCAAGTCCGACCCGGCCTACGCCAGCCGCCTC GTCGCCAGGGCCAAGAGGGTGTTTGAGTTCGCGGACAAGCACAGGGGCACGTACAGCACC CGTCTCTCGCCATACGTCTGCCCATACTACTGCTCCTACTCCGGGTACCAGGATGAGCTG CTGTGGGGGGCGGCATGGCTACACAGGGCGACCAAGAACCCGACGTACCTGAGCTACATC CAGATGAACGGGCAGGTGCTGGGCGCGGACGAGCAGGACAACACGTTCGGGTGGGACAAC AAGCACGCCGGGGCGAGGATCCTGATCGCCAAGGCGTTCCTGGTGCAGAAGGTGGCGGCG CTGCACGAGTACAAGGGCCACGCCGACAGCTTCATCTGCTCCATGGTGCCCGGCACCCCC ACGGACCAGACGCAGTACACCCGCGGCGGCCTCCTCTTCAAGCTCAGCGACAGCAACATG CAGTACGTCACCTCCAGCTCCTTCCTGCTGCTCACCTACGCCAAGTACCTCGCCTTCTCC AAGACCACCGTCTCCTGCGGCGGCGCCGCCGTCACGCCGGCCCGCCTCCGCGCCATCGCG CGCCAGCAGGTGGACTACCTGCTGGGGAGCAACCCGATGGGGATGTCGTACATGGTCGGG TACGGCGCCAAGTACCCGCGGAGGATCCACCACCGCGCGTCGTCGCTGCCGTCGGTGGCG GCGCACCCCGCCAGGATCGGCTGCTCGCAGGGGTTCACCGCGCTCTACTCCGGCGTCGCC AACCCCAACGTCCTCGTCGGCGCCGTCGTCGGAGGGCCCAACCTGCAGGACCAGTTCCCC GACCAGCGCAGCGACCACGAGCACTCCGAGCCGGCCACCTACATCAACGCGCCGCTCGTC GGAGCGCTCGCCTACCTCGCCCACTCCTACGGCCAGCTCTAGGCTCTACTACCTTCTTTG GGAGATTTGATCAAACAAATCGTCCCAGATAATAGCATCACTATTTCGACGTCGTCTTAA TCTAATTAGTCGGTGGATTTGGGGGCAGGTTAAATTTAGTGGGTAGTAATTGTGATTTGG GGACCCCAGTGCAAGCAAAACAAGAGCACTAGTGGGTCTAAGTATTCATTAGGGTACGTA ATTAACGTGCTCGCTGGTGTTAAACCCTGTGTTCGTAAAGCGGTCGACGGATGTTCGTCC GGAAAATGTACCCAGTTGCAACTCGCAACTGATTGCGAAATCAACAAGTGTTCTTATGTC T