Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0312500-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:11741908:11750685:1 gene:Os01g0312500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 3 description:Similar to Pectinesterase. (Os01t0312500-01)
Sequence	CACGTCATGACGGAGCTCTCCGCCGCCATGACCAACCAGTACACCTGCCTCGACGGCTTC GACTACAAGGACGGGGAGAGGGTGCGTCATTACATGGAGTCCAGCATCCACCACGTCTCC CGCATGGTCAGCAACTCGCTCGCCATGGCCAAGAAGCTGCCCGGCGCCGGCGGCGGTGGG ATGACCCCGTCATCGTCGTCGCCCGACACGGCGACGCAATCGGAGTCGTCAGAGACCACG CAGCGGCAGCCATTCATGGGGTACGGGCAGATGGCGAATGGGTTCCCGAAGTGGGTGAGG CCGGGAGACCGGCGGCTACTCCAAGCGCCGGCGTCGAGCATCACGCCCGACGCGGTGGTG GCGAAGGACGGGAGCGGCGGGTACACGACGGTGTCGGCGGCGGTGGCGGCGGCGCCGGCG AACTCGAACAAGAGGTACGTGATACACATCAAGGCCGGGGCGTACATGGAGAACGTGGAG GTGGGGAAGAGCAAGAAGAACCTGATGTTCATCGGCGACGGCATCGGCAAGACCGTCATC AAGGCCAGCCGCAACGTCGTCGACGGCTCCACCACCTTCCGCTCCGCCACAGTCGCTGTG GTGGGCAACAACTTCCTGGCCCGCGACCTGACGATCGAGAACTCGGCCGGCCCGTCGAAG CACCAGGCGGTGGCGCTGCGCGTGGGCGCCGACCTGTCGGCGTTCTACCGGTGCAGCTTC GTCGGCTACCAGGACACCCTCTACGTCCACTCCCTCCGCCAGTTCTTCCGCGAGTGCGAC ATCTACGGCACCATCGACTTCATCTTCGGCAACTCCGCCGTCGTCTTCCAGAGCTGCAAC CTCTACGCGCGCCGCCCGCTCCCCAACCAGAGCAACGTCTACACCGCGCAGGGGCGGGAG GACCCCAACCAGAACACCGGCATCTCCATCCAGAAGTGCAAGGTGGCCGCCGCCTCCGAC CTCCTCGCCGTCCAGTCCAGCTTCAAGACCTACCTCGGCCGCCCCTGGAAGCAGTACTCC CGCACGGTGTTCATGCAGTCGGAGCTCGACAGCGTCGTCAACCCCGCCGGGTGGCTCGAG TGGAGCGGCAACTTCGCGCTCGACACGCTCTACTACGGCGAGTACCAGAACACCGGCCCC GGGGCCTCCACGTCCAACCGGGTCAAGTGGAAGGGCTACCGCGTCATCACCAGCGCGTCG GAGGCGAGCACCTTCACCGTCGGCAACTTCATCGACGGCGACGTATGGCTCGCCGGCACG TCCGTCCCCTTCACCGTCGGGCTGTGA

Peptide Sequence

PEP ID	Os01t0312500-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:11741908:11750685:1 gene:Os01g0312500 transcript:Os01t0312500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 3 description:Similar to Pectinesterase. (Os01t0312500-01)
Sequence	HVMTELSAAMTNQYTCLDGFDYKDGERVRHYMESSIHHVSRMVSNSLAMAKKLPGAGGGG MTPSSSSPDTATQSESSETTQRQPFMGYGQMANGFPKWVRPGDRRLLQAPASSITPDAVV AKDGSGGYTTVSAAVAAAPANSNKRYVIHIKAGAYMENVEVGKSKKNLMFIGDGIGKTVI KASRNVVDGSTTFRSATVAVVGNNFLARDLTIENSAGPSKHQAVALRVGADLSAFYRCSF VGYQDTLYVHSLRQFFRECDIYGTIDFIFGNSAVVFQSCNLYARRPLPNQSNVYTAQGRE DPNQNTGISIQKCKVAAASDLLAVQSSFKTYLGRPWKQYSRTVFMQSELDSVVNPAGWLE WSGNFALDTLYYGEYQNTGPGASTSNRVKWKGYRVITSASEASTFTVGNFIDGDVWLAGT SVPFTVGL

Transcript Sequence

Transcript ID	Os01t0312500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:11741908:11750685:1 gene:Os01g0312500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 3 description:Similar to Pectinesterase. (Os01t0312500-01)
Sequence	CACGTCATGACGGAGCTCTCCGCCGCCATGACCAACCAGTACACCTGCCTCGACGGCTTC GACTACAAGGACGGGGAGAGGGTGCGTCATTACATGGAGTCCAGCATCCACCACGTCTCC CGCATGGTCAGCAACTCGCTCGCCATGGCCAAGAAGCTGCCCGGCGCCGGCGGCGGTGGG ATGACCCCGTCATCGTCGTCGCCCGACACGGCGACGCAATCGGAGTCGTCAGAGACCACG CAGCGGCAGCCATTCATGGGGTACGGGCAGATGGCGAATGGGTTCCCGAAGTGGGTGAGG CCGGGAGACCGGCGGCTACTCCAAGCGCCGGCGTCGAGCATCACGCCCGACGCGGTGGTG GCGAAGGACGGGAGCGGCGGGTACACGACGGTGTCGGCGGCGGTGGCGGCGGCGCCGGCG AACTCGAACAAGAGGTACGTGATACACATCAAGGCCGGGGCGTACATGGAGAACGTGGAG GTGGGGAAGAGCAAGAAGAACCTGATGTTCATCGGCGACGGCATCGGCAAGACCGTCATC AAGGCCAGCCGCAACGTCGTCGACGGCTCCACCACCTTCCGCTCCGCCACAGTCGCTGTG GTGGGCAACAACTTCCTGGCCCGCGACCTGACGATCGAGAACTCGGCCGGCCCGTCGAAG CACCAGGCGGTGGCGCTGCGCGTGGGCGCCGACCTGTCGGCGTTCTACCGGTGCAGCTTC GTCGGCTACCAGGACACCCTCTACGTCCACTCCCTCCGCCAGTTCTTCCGCGAGTGCGAC ATCTACGGCACCATCGACTTCATCTTCGGCAACTCCGCCGTCGTCTTCCAGAGCTGCAAC CTCTACGCGCGCCGCCCGCTCCCCAACCAGAGCAACGTCTACACCGCGCAGGGGCGGGAG GACCCCAACCAGAACACCGGCATCTCCATCCAGAAGTGCAAGGTGGCCGCCGCCTCCGAC CTCCTCGCCGTCCAGTCCAGCTTCAAGACCTACCTCGGCCGCCCCTGGAAGCAGTACTCC CGCACGGTGTTCATGCAGTCGGAGCTCGACAGCGTCGTCAACCCCGCCGGGTGGCTCGAG TGGAGCGGCAACTTCGCGCTCGACACGCTCTACTACGGCGAGTACCAGAACACCGGCCCC GGGGCCTCCACGTCCAACCGGGTCAAGTGGAAGGGCTACCGCGTCATCACCAGCGCGTCG GAGGCGAGCACCTTCACCGTCGGCAACTTCATCGACGGCGACGTATGGCTCGCCGGCACG TCCGTCCCCTTCACCGTCGGGCTGTGACACTGTGATAGAGCGCGCTGGGTTCAGGGCGTC ACGGCAATAAGCGTGCTGTGCTGACAAGTGAAGAAAGAGGGGGCACCAGTTCGAATCGAA TACCATGTTGCTGTTGATTCTTTTGTTTTTGGGCCGAAATGTGTAACATGTACCTATACG TGATTCAGAAATTACCATTCGATACGGGTCCGTATTTACGTTCTCCAT