Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0311800-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:11716329:11717780:-1 gene:Os01g0311800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 2 description:Similar to Pectin methylesterase 8 (Fragment). (Os01t0311800-01);Similar to Pectinesterase. (Os01t0311800-02)
Sequence	ATGGCGTCCTTTCACATCGCCACGGCGCTCTCGGCGACTCTGCTGCTCTCCTTGCTCGTC CTGGGCCGCTCCGACGCCACCCTGCCGCCGCCGGCCACGCCGGTGCCGCCGTCCACGGCG TGCAATGGGACGACGGACCCCACGTTCTGCCGGTCCGTGCTCCCGTCGAACGGCACCAGC AACCTCTACACCTACGGCCGGTTCTCCGTCGCCAAGTCGCTGGCGAACGCCAACAAGTTC CTTTCCCTTGTCAACCGCTACCTCTCCGGCGGTCGGCTCGCCGCCGGCGCGGTGGCGGCG CTGCAGGACTGCCAGCTGCTGTCCGGGCTCAACATCGACTTCCTGTCCGCCGCCGGCGCC ACGCTCAACAGGACGTCCAGCACGCTGCTCGACCCGCAGGCGGAGGACGTGCAGACGCTG CTGTCGGCGATCCTGACCAACCAGCAGACGTGCGCCGACGGCCTCCAGGCCGCCGCCTCG GCGTGGTCCGTGCGCAACGGCCTCGCCGTGCCGATGAGCAACAGCACCAAGCTGTACAGC GTCTCGCTCTCGCTCTTCACCAGGGCGTGGGTGCGCCCCAGCACCAAGAAGCCGAGGACG GCGACGCCGAAGCCGCCTCGCCACGGCGGCCGCGGCAGGGGCCTGTTCGACGCCACCGAC GACGAGATGGTGCGGAGGATGGCGCTCGACGGCGCCGCGGCGGCCGTGTCCACGTTCGGC GCCGTGACGGTCGACCAGAGCGGCGCCGGCAACTTCACGACCGTCTCGGACGCCGTGGCG GCGGCGCCGACGAACCTCGACGGCACCAAGGGCTACTTCGTGATACACGTCACCGCCGGC GTGTACGCGGAGAATGTGGTGGTGCCCAAGAACAAGAAGTACGTGATGATGGTCGGCGAC GGCATCGGGCAGACGGTGATCACCGGCAACCGGAGCGTCGTCGACGGCTGGACGACCTTC AACTCCGCCACGTTCGGTGAGTTAATTTGTCAACGCAATTTCTTCTCGTAG

Peptide Sequence

PEP ID	Os01t0311800-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:11716329:11717780:-1 gene:Os01g0311800 transcript:Os01t0311800-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 2 description:Similar to Pectin methylesterase 8 (Fragment). (Os01t0311800-01);Similar to Pectinesterase. (Os01t0311800-02)
Sequence	MASFHIATALSATLLLSLLVLGRSDATLPPPATPVPPSTACNGTTDPTFCRSVLPSNGTS NLYTYGRFSVAKSLANANKFLSLVNRYLSGGRLAAGAVAALQDCQLLSGLNIDFLSAAGA TLNRTSSTLLDPQAEDVQTLLSAILTNQQTCADGLQAAASAWSVRNGLAVPMSNSTKLYS VSLSLFTRAWVRPSTKKPRTATPKPPRHGGRGRGLFDATDDEMVRRMALDGAAAAVSTFG AVTVDQSGAGNFTTVSDAVAAAPTNLDGTKGYFVIHVTAGVYAENVVVPKNKKYVMMVGD GIGQTVITGNRSVVDGWTTFNSATFGELICQRNFFS

Transcript Sequence

Transcript ID	Os01t0311800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:11716329:11717780:-1 gene:Os01g0311800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 2 description:Similar to Pectin methylesterase 8 (Fragment). (Os01t0311800-01);Similar to Pectinesterase. (Os01t0311800-02)
Sequence	CATCTCAAGTCTCAAGCTTAATTAAGCTCGTAATCTCATATAACCTCTTTTTGGACGAAG CTTGCCACTCGATCGTGTTAACCACTCGAGCTTGAGCGAGCGAGCTAGCTTTGCTCTGAC GAGAAAAATGGCGTCCTTTCACATCGCCACGGCGCTCTCGGCGACTCTGCTGCTCTCCTT GCTCGTCCTGGGCCGCTCCGACGCCACCCTGCCGCCGCCGGCCACGCCGGTGCCGCCGTC CACGGCGTGCAATGGGACGACGGACCCCACGTTCTGCCGGTCCGTGCTCCCGTCGAACGG CACCAGCAACCTCTACACCTACGGCCGGTTCTCCGTCGCCAAGTCGCTGGCGAACGCCAA CAAGTTCCTTTCCCTTGTCAACCGCTACCTCTCCGGCGGTCGGCTCGCCGCCGGCGCGGT GGCGGCGCTGCAGGACTGCCAGCTGCTGTCCGGGCTCAACATCGACTTCCTGTCCGCCGC CGGCGCCACGCTCAACAGGACGTCCAGCACGCTGCTCGACCCGCAGGCGGAGGACGTGCA GACGCTGCTGTCGGCGATCCTGACCAACCAGCAGACGTGCGCCGACGGCCTCCAGGCCGC CGCCTCGGCGTGGTCCGTGCGCAACGGCCTCGCCGTGCCGATGAGCAACAGCACCAAGCT GTACAGCGTCTCGCTCTCGCTCTTCACCAGGGCGTGGGTGCGCCCCAGCACCAAGAAGCC GAGGACGGCGACGCCGAAGCCGCCTCGCCACGGCGGCCGCGGCAGGGGCCTGTTCGACGC CACCGACGACGAGATGGTGCGGAGGATGGCGCTCGACGGCGCCGCGGCGGCCGTGTCCAC GTTCGGCGCCGTGACGGTCGACCAGAGCGGCGCCGGCAACTTCACGACCGTCTCGGACGC CGTGGCGGCGGCGCCGACGAACCTCGACGGCACCAAGGGCTACTTCGTGATACACGTCAC CGCCGGCGTGTACGCGGAGAATGTGGTGGTGCCCAAGAACAAGAAGTACGTGATGATGGT CGGCGACGGCATCGGGCAGACGGTGATCACCGGCAACCGGAGCGTCGTCGACGGCTGGAC GACCTTCAACTCCGCCACGTTCGGTGAGTTAATTTGTCAACGCAATTTCTTCTCGTAGAA GTTTTAGGTAATTAAGTTGGTACATGTCGGTGTTCGGTACTAGGGTTTTAATTCCATACT GCAATTTGGCCAGCTGGTTCGATAATTAATGAAGTGGGAACTAGGAGCAAGTAGAGTAGT GTAGCGGTAGATTAATAAGCGGGTCGCAAGTCAAAAGTGTGTTGACACTTTACATCAGTG CAAACGTACCTCACCCTCACCGCCCGGCCGGAATACGATCATTGACGAGGCATCCCATGA GTTATTAAAATCCTTAGCTGTTAGGCTCATAATGCATAGTAGATGTTTCTGAATCCTATA AAAACTTATCTG