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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0311400-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:11690379:11690975:1 gene:Os01g0311400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0311400-00)
Sequence

ATGTCAGATCGGGGAACGAGCTCGAGCGTCTCCGGTGACACGGACGCGGACTCCGTGCCC
ACCGCCGACGCCGCCGCCCCGCTCTGGGCGCCGCACGGCCGCGCGCTCACGGGCTGCCTC
GTCGTCGTCAACGTCGCGCTCGTCCTCCTCGTCTACCTCTACTTCTGGAGGGTGTTCTCG
CGCAAGCGCGCCGCCGCTGCAGCCTCCGCGCGCAGCGACGACGACGACGACGACGACGAG
GCGTCGTCCTCCGCCTCGGCTCCGCCCCCGGCCGCGGCGGCCGTCTCTGTGAGGACCCGG
GACGACGTGCTGGCGTCGCTGCCCGTGTTCGTCGTGCGCTCGTCCGGCGGGGAGAAGGCG
GAGGCGGAGGCGGAGTGCGCGGTGTGCATCGCGGAGCTGAGGGACGGCGACGAGTGCCGC
GCGCTGCCGCGGTGCGGGCACCGGTTCCACGCGTCGTGCGTCGACGGGTGGCTGCGGCTG
CACACCACCTGCCCGCTCTGCCGTGCCAGCGTCGTCGCCCTCGCCGCCGCCCCGGAGCGC
AAAGGTGGCGTGGCGGACACGACGGCGGCCGCGGAGGATGTGGATGCGCGTGTCTAG

Peptide Sequence

PEP ID

Os01t0311400-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:11690379:11690975:1 gene:Os01g0311400 transcript:Os01t0311400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0311400-00)
Sequence

MSDRGTSSSVSGDTDADSVPTADAAAPLWAPHGRALTGCLVVVNVALVLLVYLYFWRVFS
RKRAAAAASARSDDDDDDDEASSSASAPPPAAAAVSVRTRDDVLASLPVFVVRSSGGEKA
EAEAECAVCIAELRDGDECRALPRCGHRFHASCVDGWLRLHTTCPLCRASVVALAAAPER
KGGVADTTAAAEDVDARV

Transcript Sequence

Transcript ID

Os01t0311400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:11690379:11690975:1 gene:Os01g0311400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0311400-00)
Sequence

ATGTCAGATCGGGGAACGAGCTCGAGCGTCTCCGGTGACACGGACGCGGACTCCGTGCCC
ACCGCCGACGCCGCCGCCCCGCTCTGGGCGCCGCACGGCCGCGCGCTCACGGGCTGCCTC
GTCGTCGTCAACGTCGCGCTCGTCCTCCTCGTCTACCTCTACTTCTGGAGGGTGTTCTCG
CGCAAGCGCGCCGCCGCTGCAGCCTCCGCGCGCAGCGACGACGACGACGACGACGACGAG
GCGTCGTCCTCCGCCTCGGCTCCGCCCCCGGCCGCGGCGGCCGTCTCTGTGAGGACCCGG
GACGACGTGCTGGCGTCGCTGCCCGTGTTCGTCGTGCGCTCGTCCGGCGGGGAGAAGGCG
GAGGCGGAGGCGGAGTGCGCGGTGTGCATCGCGGAGCTGAGGGACGGCGACGAGTGCCGC
GCGCTGCCGCGGTGCGGGCACCGGTTCCACGCGTCGTGCGTCGACGGGTGGCTGCGGCTG
CACACCACCTGCCCGCTCTGCCGTGCCAGCGTCGTCGCCCTCGCCGCCGCCCCGGAGCGC
AAAGGTGGCGTGGCGGACACGACGGCGGCCGCGGAGGATGTGGATGCGCGTGTCTAG