Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0306800-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:11412154:11421047:1 gene:Os01g0306800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0306800-01);Hypothetical conserved gene. (Os01t0306800-02)
Sequence

ATGGCCGCCCGCGCGCTGGGTCCACCTCCTCTTCACGCTCTCGCAGCCACGCGGCAGGCT
CCTCGCTGCCCCCCGGCTGCCGCCGCGCCGCCGACCCATGGCTACCGGCGTGGAGCCGCG
GTGCTCTCCGGCCGCCGGGGAAGGCATACTTTGAGTTCAATACAATTGATGCATGCTGTT
AGAGGTGGCAATCTTCAAGTGGAACCAAACATGCTTCATTCCCCCAAGCCATTGATGTCC
ACCAGACGTGGGTGTGTGGCTAGTCCTACTATTGCTAATGTGGATGACTGCACTGAAGGT
GAAGGTGCACTGGGGTACACAATGACCCAAATCTGTGATAAGTTTATTGAGTTCTTCATG
TACAAGAAACCACAAACAAAGGACTGGAGAAAAGTATTGGTGTTTAGAGAGGAGTGGGAA
AGATACAGACCATACTTTTACAAGCACTGTCAAGCACGTATAGATATGGAAAATGATTCT
TCAATGAAGCAAAAGTTGGTTGTACTTGCTAGAAAAGTTAAGAAGATTGACAATGAGATA
GAGAAGCACATGGAACTCTTCACACAGCTCCGCGAGAATCCCACAGATATTAATGCCATT
GTCGCAAGAAGACGAAAGGATTTCACTGGAGGGTTCTTCCAACATCTTAATTTTCTTGTT
AATGCATATAATGGTCTTGATGAGAGAGATGCAATTGCCAGGCTTGGGGCGAAGTGCCTG
TCTGCAATCCATGCATATGACTGCACACTGGAGCAGTTGGACCTTGATTCTGCTCAATCA
AAGTTTGATGACATTCTGAATTCTTCTTCCCTGGATGATGCATGTGACAAGATTAAAAGC
TTAGCCAAGACTAAAGAACTTGATTCGTCCTTAATTCTTCTAATAAACAGAGCGTGGGCT
GCTGCAAAAGACTCTACAACTATGAAGAATGAGGTTAAAGATATAATGTGTCATATCTAT
ACAACAACTAAGGAAAGTCTCAAGAGCATCTCGCCTCCAGAGATGAAGCTTCTGAAGTAC
CTATTGAATATTGAAGATCCTGAAGAGCGGTTTGGTGCTCTTGCAACAGCCTTTTCTCCA
GAAGTCGAGCATGAAGCCAAGGATGAAGATGCTCTGTACACAACTCCCAACGAACTCCAC
AAATGGACCAAAATGATGCTTGATTCGTACCATCTCAATAAGGAGGAGACGGATTTTATG
GATGCCAGAAAGATGAGTGACCCAGTGATCATACAGAGGTTAACTTTGCTTAAAGAGACA
ATCGAAGAAGAATACATGAAGAAGTATATACATCCAGAGGAGCAAGAATCTGAGGACGAC
GAAGATTCAGAAGAGTGA

Peptide Sequence

PEP ID

Os01t0306800-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:11412154:11421047:1 gene:Os01g0306800 transcript:Os01t0306800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0306800-01);Hypothetical conserved gene. (Os01t0306800-02)
Sequence

MAARALGPPPLHALAATRQAPRCPPAAAAPPTHGYRRGAAVLSGRRGRHTLSSIQLMHAV
RGGNLQVEPNMLHSPKPLMSTRRGCVASPTIANVDDCTEGEGALGYTMTQICDKFIEFFM
YKKPQTKDWRKVLVFREEWERYRPYFYKHCQARIDMENDSSMKQKLVVLARKVKKIDNEI
EKHMELFTQLRENPTDINAIVARRRKDFTGGFFQHLNFLVNAYNGLDERDAIARLGAKCL
SAIHAYDCTLEQLDLDSAQSKFDDILNSSSLDDACDKIKSLAKTKELDSSLILLINRAWA
AAKDSTTMKNEVKDIMCHIYTTTKESLKSISPPEMKLLKYLLNIEDPEERFGALATAFSP
EVEHEAKDEDALYTTPNELHKWTKMMLDSYHLNKEETDFMDARKMSDPVIIQRLTLLKET
IEEEYMKKYIHPEEQESEDDEDSEE

Transcript Sequence

Transcript ID

Os01t0306800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:11412154:11421047:1 gene:Os01g0306800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0306800-01);Hypothetical conserved gene. (Os01t0306800-02)
Sequence

GCAGAGCACCGTCCACTCTTCCTCCGACCAACGCGCTCGCCTCGCGTCATCGGCTCAAAT
GGTGGAGGCGGCCACGCGCGGAACCGAGAGCCCCTCCTCCTGCTAATGCGCCGCCATGGC
CGCCCGCGCGCTGGGTCCACCTCCTCTTCACGCTCTCGCAGCCACGCGGCAGGCTCCTCG
CTGCCCCCCGGCTGCCGCCGCGCCGCCGACCCATGGCTACCGGCGTGGAGCCGCGGTGCT
CTCCGGCCGCCGGGGAAGGCATACTTTGAGTTCAATACAATTGATGCATGCTGTTAGAGG
TGGCAATCTTCAAGTGGAACCAAACATGCTTCATTCCCCCAAGCCATTGATGTCCACCAG
ACGTGGGTGTGTGGCTAGTCCTACTATTGCTAATGTGGATGACTGCACTGAAGGTGAAGG
TGCACTGGGGTACACAATGACCCAAATCTGTGATAAGTTTATTGAGTTCTTCATGTACAA
GAAACCACAAACAAAGGACTGGAGAAAAGTATTGGTGTTTAGAGAGGAGTGGGAAAGATA
CAGACCATACTTTTACAAGCACTGTCAAGCACGTATAGATATGGAAAATGATTCTTCAAT
GAAGCAAAAGTTGGTTGTACTTGCTAGAAAAGTTAAGAAGATTGACAATGAGATAGAGAA
GCACATGGAACTCTTCACACAGCTCCGCGAGAATCCCACAGATATTAATGCCATTGTCGC
AAGAAGACGAAAGGATTTCACTGGAGGGTTCTTCCAACATCTTAATTTTCTTGTTAATGC
ATATAATGGTCTTGATGAGAGAGATGCAATTGCCAGGCTTGGGGCGAAGTGCCTGTCTGC
AATCCATGCATATGACTGCACACTGGAGCAGTTGGACCTTGATTCTGCTCAATCAAAGTT
TGATGACATTCTGAATTCTTCTTCCCTGGATGATGCATGTGACAAGATTAAAAGCTTAGC
CAAGACTAAAGAACTTGATTCGTCCTTAATTCTTCTAATAAACAGAGCGTGGGCTGCTGC
AAAAGACTCTACAACTATGAAGAATGAGGTTAAAGATATAATGTGTCATATCTATACAAC
AACTAAGGAAAGTCTCAAGAGCATCTCGCCTCCAGAGATGAAGCTTCTGAAGTACCTATT
GAATATTGAAGATCCTGAAGAGCGGTTTGGTGCTCTTGCAACAGCCTTTTCTCCAGAAGT
CGAGCATGAAGCCAAGGATGAAGATGCTCTGTACACAACTCCCAACGAACTCCACAAATG
GACCAAAATGATGCTTGATTCGTACCATCTCAATAAGGAGGAGACGGATTTTATGGATGC
CAGAAAGATGAGTGACCCAGTGATCATACAGAGGTTAACTTTGCTTAAAGAGACAATCGA
AGAAGAATACATGAAGAAGTATATACATCCAGAGGAGCAAGAATCTGAGGACGACGAAGA
TTCAGAAGAGTGAGCTTGCAAGTGTATTTTTATAGTTGTAGTCTTGATGCAGAGATGATA
TTTTTATAGTTGTAGTCTTGATGCAGAGACGGTATTTTTCTAGTTGTAGTTACTGCAGAT
TGGTAGTGCCCTGCTGCTTTTTGCAAAGATGGACTTCAATCTGCTTTGCTTCCCTCCTGT
TGGACGAAAGAAAATGCCAGTGGTGCAGTAATTGTAAAGTGTATCATGATCATCCCAAAG
CCTGCGTATCATAAAATTCCCTAAGATTGGTGGGGTTCCTTTTTCCCTGTTTTTCCAAAT
TGTTCTCTCCTCTTGATTTTATGATTGTGAGTCACAAAGATGTTGCC