Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0305900-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:11350507:11356863:1 gene:Os01g0305900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to R2R3 Myb transcription factor MYB-IF35. (Os01t0305900-01)
Sequence

ATGGGGAGGGCGCCGTGCTGCGAGAAGGTGGGGTTGAGGAGGGGGAGGTGGACGAAGGAG
GAGGACGAGAAGCTGGCGAGGTACATACGGGAGAACGGGGAAGGGGCGTGGAGGTCGATG
CCCAAGAATGCCGGCCTGCTGCGCTGCGGCAAGAGCTGCAGGCTTCGGTGGATCAACTAC
CTCCGGGCCGACCTCAAGAGGGGGAACATCTCGCCCCAGGAGGAGGACATCATCCTCAAC
CTCCACGCCACACTCGGCAACAGGTGGTCCCTGATCGCCGGCCACTTGCCCGGGCGGACG
GACAATGAGATCAAGAACTACTGGAACTCGCACCTGAGCCGGAAGGGATACGAGTTCCTC
CGCGGCGGCGGCGGCGGCGCCGTCGTCGACGTCGACCTCAGCAAGTTGCCCGGCGGCGGG
AAGCGGCGCGGCGGCCGGACGGGCCGCAGCAGCAGCGGGAAGGAGAAGACGAGGACGAAG
GAGAAGGACAAGGCCCCCGCTCCAGAAGCTGCGCACAATGACGACGGCGGCGGCGGCGGC
GGCGGCGGCATTGACAACGTCTCGGCAGCTAGCCACAGCCACAGGGAGGAGCAGGCACAG
GCGAGCGCCAGTGGTCTCACATCAGATGGGCTCGAGGAGGGCCCACTGGGCCTAAGCGAG
GAGATGGTGAGTGGGCCCGTGGGACCGGTGAGCCCAAAGCCTGAGGTGGGCCAGGATGGG
TCTTCTGCAGAGAGTGGCTGCTGTGGGCCTAGTGGATCCAGTGGCCCAACCGAGGCTGTG
GGCCAGGACATGGGCGACAAGTCCATGGACTGGGACCTGGTGGGCCTGGACGATGGCTTC
GCCAACGATGACATGTGGGGCTCACTCTCCTGGGACTACGGGGAGTTGGTGGGCCCGGAT
GGAGTTCATCAGGGCGAGGTGCTATCCGACTTGTTCTTCTTGGGCAACCTGTAG

Peptide Sequence

PEP ID

Os01t0305900-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:11350507:11356863:1 gene:Os01g0305900 transcript:Os01t0305900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to R2R3 Myb transcription factor MYB-IF35. (Os01t0305900-01)
Sequence

MGRAPCCEKVGLRRGRWTKEEDEKLARYIRENGEGAWRSMPKNAGLLRCGKSCRLRWINY
LRADLKRGNISPQEEDIILNLHATLGNRWSLIAGHLPGRTDNEIKNYWNSHLSRKGYEFL
RGGGGGAVVDVDLSKLPGGGKRRGGRTGRSSSGKEKTRTKEKDKAPAPEAAHNDDGGGGG
GGGIDNVSAASHSHREEQAQASASGLTSDGLEEGPLGLSEEMVSGPVGPVSPKPEVGQDG
SSAESGCCGPSGSSGPTEAVGQDMGDKSMDWDLVGLDDGFANDDMWGSLSWDYGELVGPD
GVHQGEVLSDLFFLGNL

Transcript Sequence

Transcript ID

Os01t0305900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:11350507:11356863:1 gene:Os01g0305900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to R2R3 Myb transcription factor MYB-IF35. (Os01t0305900-01)
Sequence

GCACGCTGCATATATCCGAGAGCCCAAGCGCGCGTCAGGGCAGGCAGGCTCCACCATTTC
TCCCAGCTCGACCCGCGCACACCGCCGCCCGGGGAGGAAAAGCATGGGGAGGGCGCCGTG
CTGCGAGAAGGTGGGGTTGAGGAGGGGGAGGTGGACGAAGGAGGAGGACGAGAAGCTGGC
GAGGTACATACGGGAGAACGGGGAAGGGGCGTGGAGGTCGATGCCCAAGAATGCCGGCCT
GCTGCGCTGCGGCAAGAGCTGCAGGCTTCGGTGGATCAACTACCTCCGGGCCGACCTCAA
GAGGGGGAACATCTCGCCCCAGGAGGAGGACATCATCCTCAACCTCCACGCCACACTCGG
CAACAGGTGGTCCCTGATCGCCGGCCACTTGCCCGGGCGGACGGACAATGAGATCAAGAA
CTACTGGAACTCGCACCTGAGCCGGAAGGGATACGAGTTCCTCCGCGGCGGCGGCGGCGG
CGCCGTCGTCGACGTCGACCTCAGCAAGTTGCCCGGCGGCGGGAAGCGGCGCGGCGGCCG
GACGGGCCGCAGCAGCAGCGGGAAGGAGAAGACGAGGACGAAGGAGAAGGACAAGGCCCC
CGCTCCAGAAGCTGCGCACAATGACGACGGCGGCGGCGGCGGCGGCGGCGGCATTGACAA
CGTCTCGGCAGCTAGCCACAGCCACAGGGAGGAGCAGGCACAGGCGAGCGCCAGTGGTCT
CACATCAGATGGGCTCGAGGAGGGCCCACTGGGCCTAAGCGAGGAGATGGTGAGTGGGCC
CGTGGGACCGGTGAGCCCAAAGCCTGAGGTGGGCCAGGATGGGTCTTCTGCAGAGAGTGG
CTGCTGTGGGCCTAGTGGATCCAGTGGCCCAACCGAGGCTGTGGGCCAGGACATGGGCGA
CAAGTCCATGGACTGGGACCTGGTGGGCCTGGACGATGGCTTCGCCAACGATGACATGTG
GGGCTCACTCTCCTGGGACTACGGGGAGTTGGTGGGCCCGGATGGAGTTCATCAGGGCGA
GGTGCTATCCGACTTGTTCTTCTTGGGCAACCTGTAGCCAAGATGTGTAGGTGAAGTGAC
AAACGTGTTTGGGTTTCACCATCTTTTGGGCATGTTTGATGGGGGCCGTATTGATTTTGG
GGTAGAGAGGTTGATGCGTGTCTAGTGAGAAGAACGATACTAGTTGAGTACTTGCGTTAG
TTCTTTTGGTTTACCGGTCATGAAGATTTGTGTGCGTATGCATCAACATGAGATTAATGC
ATAGACCGCACGCTATGAATGTATAATTCTAGCATCC