Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0304300-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:11272159:11277795:1 gene:Os01g0304300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os01t0304300-01)
Sequence	ATGAGCGGCGTCGCGTCGCTGGGGCTCAGGTCGTCCGGGAGCTATGGATCCTTGCAGCAG TCCAACGGCCAGTCGCCGGCGCCGGCGCCGTCTCCGCCGCTCGCCGCGAGGAAGGCCGGG AAGATGTCCTTCGGAGGGGCGGGCGCTGGAGGCCGAGGCCTCCTCTTCGCCCGGATCTGC AAGCTCACCAGCCGCCGCCGGCGGATGCTCCTCCTCCTCCTCGTCGCCGCTGCCGTGCTC TTCTGCTTCCTCTTCTCATCACTCGTCAGTAAAGATGAAGATGCACCACCTGGTATTGAA ACCATGCTTGGAATTTCTGATCAAGTCCGGAGCTTTGTGAATCCTGTTTGGACATCTTCG GGTAGACCAATAACCCAGGGAGATTCTTTGAATGGGAATGGTTTGAATACAGCATCACAG ACAGAAAAACAGTCTGACTCTGACAGTAGTCATAAAAAACTTCAGGGTCTCTCATGGAGC TTCCCGCCATCTATTGTACTGGAGCACCACCCTTGTGAAAATTTCTCATTTTTTCCTCCA CCTATTGACAGGAAACGCACTGGACCACGGCCATGTCCTGTTTGTTATGTGCCTGTTGAG CAGGCCCTGGCATTGATGCCAGGTGCACCATCAGCATCACCAGTCCTTCGAAGCTTAAAT TATTTGTCTGGTGATAATTTGATTTCAAAAGAGTCAAACCACGGTTCTTTGTTTGGAGGT TATCCATCATTGGAAGAGCGAGACAAGTCTTATGACATAAAAGACTCAATGACGGTTCAT TGTGGATTTGCGAGAGGGAAGATACCCGGTGTCAATACTGGGTTCGATATAGATAGAGCT GATCTTTCTGAGATGTGGCAGTGCCAGGGGATAGTTGTTGCTTCTGCTATTTTTGGAAAT TATGATATAATGCAACAACCAAAAAACATCAGTGTTTTTTCAAAGGATACAGTTTGCTTC TTCATGTTTCTGGATGAAGAAACAGAAGCAGCAATAAAGAACACTACAACAATTGATAAT TCTAAAAGAATTGGGCTATGGCGGGTGGTTGTTGTCCGCAATCTTCCATATTCAGATGCA AGGCGCAATGGAAAGGTTCCAAAATTACTACTTCATCGTCTATTTCCTAATGTGCGGTAT TCAATTTGGATTGATGGGAAACTTAAACTAGTGAGGGATCCTTATCAGCTATTAGAGAGA TTCTTGTGGAGAAAGAATGTTAGCTTCGCTATTTCCAGGCATTACAGACGCTTTGATGTC TTTGAGGAAGCAGAGGCCAACAAGGTTGGTGGAAAGTATGACAATGCTTCAATCGATTAC CAAATAGAATTCTACAAGAGAGAGGGTTTAACCCATTATTCTTCAGCTAAGCTTCCTATC ACGAGTGACGTCCCTGAGGGCTGTGTAATTATACGGGAGCACATCCCTATCACCAACCTC TTCACGTGCCTTTGGTTTAATGAAGTTGATCGCTTCACCTCCAGAGATCAGCTGAGCTTT AGCACAGTGAGAGATAAAATAAGGAAACGAGTTAACTGGACTGCAGATATGTTCCTGGAT TGCGAAAGGCGTGACTTCGTTGTCCAGGCATATCACAGAGAACTATGGGAACAAATACTA CGAAGTCCGCCTCCACCCCAGCCTCGTTTGGTGCGCCAGCAACCCAGAAAGATGCTTCCG GATAATACAGCAAAGGAACCTGGAAAAGCCTCCGGGTCCAAGAGGGTATCAGCGAAGCGG ACACGGGATAAGAAATCAGGCTCGAAACGAGCTCATAGAAGTAAGGTCACTGGTGGGAAG GAATTCATCCAACTGTAA

Peptide Sequence

PEP ID	Os01t0304300-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:11272159:11277795:1 gene:Os01g0304300 transcript:Os01t0304300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os01t0304300-01)
Sequence	MSGVASLGLRSSGSYGSLQQSNGQSPAPAPSPPLAARKAGKMSFGGAGAGGRGLLFARIC KLTSRRRRMLLLLLVAAAVLFCFLFSSLVSKDEDAPPGIETMLGISDQVRSFVNPVWTSS GRPITQGDSLNGNGLNTASQTEKQSDSDSSHKKLQGLSWSFPPSIVLEHHPCENFSFFPP PIDRKRTGPRPCPVCYVPVEQALALMPGAPSASPVLRSLNYLSGDNLISKESNHGSLFGG YPSLEERDKSYDIKDSMTVHCGFARGKIPGVNTGFDIDRADLSEMWQCQGIVVASAIFGN YDIMQQPKNISVFSKDTVCFFMFLDEETEAAIKNTTTIDNSKRIGLWRVVVVRNLPYSDA RRNGKVPKLLLHRLFPNVRYSIWIDGKLKLVRDPYQLLERFLWRKNVSFAISRHYRRFDV FEEAEANKVGGKYDNASIDYQIEFYKREGLTHYSSAKLPITSDVPEGCVIIREHIPITNL FTCLWFNEVDRFTSRDQLSFSTVRDKIRKRVNWTADMFLDCERRDFVVQAYHRELWEQIL RSPPPPQPRLVRQQPRKMLPDNTAKEPGKASGSKRVSAKRTRDKKSGSKRAHRSKVTGGK EFIQL

Transcript Sequence

Transcript ID	Os01t0304300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:11272159:11277795:1 gene:Os01g0304300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os01t0304300-01)
Sequence	GGTAGTACTCCACACCGCAAACCAGCCAACCTCCTCCCCCCCTCCCCGTCGCACTCCACG CCGCGCTCTCCTCCCCCTTTCCATTTCCGGAGCTCATCAATCCCACCCACGGTTTCTGCA ACCACCACCCCCCCCCCCCGGAAAATTTCAAAAATTTATCTCACACCAACGATCTCTCTC TCTCTCTCTCTCCCTCCCCGTCTCGTCCCCTCCAATCCCCAATCCCGCCGCGCCGCCGCC GCCGCCACCGCCACCGATCTCCATCACCGCGAGCGGCTGTGCCGGCGTCCTGCCGCATCC TCTCCGGTGAACGACCGTACGCGCATCCTCTCTCGCTCTGTGTGTGTACGTGGCTCTCGT CCGCTCGAATCGCACACCTCCTCGATCCACCCGCATTCGCCAAATTCGTGCCCCAGTTTT TGCTCCGAATCGGTAGATCTCGGTCTCGGGTCGGTGCTGCCTTTGCCCAATCGCGCGGTC CGAGATTTTGGGCCGTTTTTGGTTTGGGGGGGATCTCACCGGTGCTATTTCCTTCCGCGA ATTCGCGCTGTTCCATTTCAAAAACCACAGGGGGCGACGAGATTTTTTCCCCCCGTACGG ATTGCAGCTTCCACTGTTGGGGGTACTGGTGCTAGTCGCGGCATTGGATCGACCGGCCAT TGGGGAGGGGGTTGGTGGTGGTGGGTTGGTGGTGAGGCCTGTGATCCGCGCTGCCCGCCA CAGCCAGAGACTTGGGGGGTGGGGGCGATGAGAGCTGGCGCCGTGGCCTCGAAGGCGGCG GCGGCATGAGCGGCGTCGCGTCGCTGGGGCTCAGGTCGTCCGGGAGCTATGGATCCTTGC AGCAGTCCAACGGCCAGTCGCCGGCGCCGGCGCCGTCTCCGCCGCTCGCCGCGAGGAAGG CCGGGAAGATGTCCTTCGGAGGGGCGGGCGCTGGAGGCCGAGGCCTCCTCTTCGCCCGGA TCTGCAAGCTCACCAGCCGCCGCCGGCGGATGCTCCTCCTCCTCCTCGTCGCCGCTGCCG TGCTCTTCTGCTTCCTCTTCTCATCACTCGTCAGTAAAGATGAAGATGCACCACCTGGTA TTGAAACCATGCTTGGAATTTCTGATCAAGTCCGGAGCTTTGTGAATCCTGTTTGGACAT CTTCGGGTAGACCAATAACCCAGGGAGATTCTTTGAATGGGAATGGTTTGAATACAGCAT CACAGACAGAAAAACAGTCTGACTCTGACAGTAGTCATAAAAAACTTCAGGGTCTCTCAT GGAGCTTCCCGCCATCTATTGTACTGGAGCACCACCCTTGTGAAAATTTCTCATTTTTTC CTCCACCTATTGACAGGAAACGCACTGGACCACGGCCATGTCCTGTTTGTTATGTGCCTG TTGAGCAGGCCCTGGCATTGATGCCAGGTGCACCATCAGCATCACCAGTCCTTCGAAGCT TAAATTATTTGTCTGGTGATAATTTGATTTCAAAAGAGTCAAACCACGGTTCTTTGTTTG GAGGTTATCCATCATTGGAAGAGCGAGACAAGTCTTATGACATAAAAGACTCAATGACGG TTCATTGTGGATTTGCGAGAGGGAAGATACCCGGTGTCAATACTGGGTTCGATATAGATA GAGCTGATCTTTCTGAGATGTGGCAGTGCCAGGGGATAGTTGTTGCTTCTGCTATTTTTG GAAATTATGATATAATGCAACAACCAAAAAACATCAGTGTTTTTTCAAAGGATACAGTTT GCTTCTTCATGTTTCTGGATGAAGAAACAGAAGCAGCAATAAAGAACACTACAACAATTG ATAATTCTAAAAGAATTGGGCTATGGCGGGTGGTTGTTGTCCGCAATCTTCCATATTCAG ATGCAAGGCGCAATGGAAAGGTTCCAAAATTACTACTTCATCGTCTATTTCCTAATGTGC GGTATTCAATTTGGATTGATGGGAAACTTAAACTAGTGAGGGATCCTTATCAGCTATTAG AGAGATTCTTGTGGAGAAAGAATGTTAGCTTCGCTATTTCCAGGCATTACAGACGCTTTG ATGTCTTTGAGGAAGCAGAGGCCAACAAGGTTGGTGGAAAGTATGACAATGCTTCAATCG ATTACCAAATAGAATTCTACAAGAGAGAGGGTTTAACCCATTATTCTTCAGCTAAGCTTC CTATCACGAGTGACGTCCCTGAGGGCTGTGTAATTATACGGGAGCACATCCCTATCACCA ACCTCTTCACGTGCCTTTGGTTTAATGAAGTTGATCGCTTCACCTCCAGAGATCAGCTGA GCTTTAGCACAGTGAGAGATAAAATAAGGAAACGAGTTAACTGGACTGCAGATATGTTCC TGGATTGCGAAAGGCGTGACTTCGTTGTCCAGGCATATCACAGAGAACTATGGGAACAAA TACTACGAAGTCCGCCTCCACCCCAGCCTCGTTTGGTGCGCCAGCAACCCAGAAAGATGC TTCCGGATAATACAGCAAAGGAACCTGGAAAAGCCTCCGGGTCCAAGAGGGTATCAGCGA AGCGGACACGGGATAAGAAATCAGGCTCGAAACGAGCTCATAGAAGTAAGGTCACTGGTG GGAAGGAATTCATCCAACTGTAAATCTCGTGGCAAATTTTGCTCCATACGATTGCGGTCA AATTCCGGCGTTGGGTTCATTATTTAACCTCAATTCATTCTCCCCCTCTCCAAAGGCTCG AAAATTTTGTCAGGAATTGTTGATAGAGGATCATTTTTTTGTGTTGTAAATAAACATTTT AGAATAAAGACGGATTCGACT