Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0303800-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:11245276:11246714:1 gene:Os01g0303800 gene_biotype:protein_coding transcript_biotype:protein_coding description:UspA domain containing protein. (Os01t0303800-01);UspA domain containing protein. (Os01t0303800-02)
Sequence

ATGGCGTCGTCTGTTCCCGAGGATGGTGCTAGCGCTGCTGCTGCGGCCGCTACTGCTGAC
CCTGCTGCTGCTGCGGCTGAGGCTCCCGGGCGACGCATCGTGGTGGCCGTGGACGAGAGC
GAGGAGAGCACGCACGCGCTCACCTGGTGCCTCGCCAACGTCGTCTCCTCCTCCGGCGGC
GACACGCTCGTGCTGCTCCACGCCCGCCGCCCCCGCCCCGTCTACGCCGCCATGGACAGC
TCAGGGTACATGATGACCTCGGACGTGATGGCGAGCATGGACAAGTACGCCGCCGCCGTC
TCCGCCGCGGCGGTGGGCAAGGCCAAGCACATCTGCGCCGCTTTCCCTCACGTGACGGTG
GAGACGATGGTGGAGAGCGGGGACCCGCGCGACGTCATCTGCGACGCCACCGAGAAGATG
GCCGCCGATCTGCTGGTCATGGGCACCCATGGATACGGCCTCATCCAGAGGGCGTTCCTG
GGAAGCGTGAGCAATCACTGTGCGCAGAACTGCAAATGCCCAGTGCTGATTGTCAAGAGG
CCAAAATAA

Peptide Sequence

PEP ID

Os01t0303800-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:11245276:11246714:1 gene:Os01g0303800 transcript:Os01t0303800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:UspA domain containing protein. (Os01t0303800-01);UspA domain containing protein. (Os01t0303800-02)
Sequence

MASSVPEDGASAAAAAATADPAAAAAEAPGRRIVVAVDESEESTHALTWCLANVVSSSGG
DTLVLLHARRPRPVYAAMDSSGYMMTSDVMASMDKYAAAVSAAAVGKAKHICAAFPHVTV
ETMVESGDPRDVICDATEKMAADLLVMGTHGYGLIQRAFLGSVSNHCAQNCKCPVLIVKR
PK

Transcript Sequence

Transcript ID

Os01t0303800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:11245276:11246714:1 gene:Os01g0303800 gene_biotype:protein_coding transcript_biotype:protein_coding description:UspA domain containing protein. (Os01t0303800-01);UspA domain containing protein. (Os01t0303800-02)
Sequence

GCCACCAGATCGGCAAGCGTGACGGCTCATCGTCATCTTCCCTCCATTAAATCGGCAGAT
CGACTCGGTGTCCGCATCTCTCCACTTCTCCAACCAATTGCCCGATTCATCGATCTCTCA
TCGTTCGTTCGCTCTAGCTAGGTTGAAGACTCGGGAGTCTAGCTAGCTGCTGTCGAGAGT
GATGGCGTCGTCTGTTCCCGAGGATGGTGCTAGCGCTGCTGCTGCGGCCGCTACTGCTGA
CCCTGCTGCTGCTGCGGCTGAGGCTCCCGGGCGACGCATCGTGGTGGCCGTGGACGAGAG
CGAGGAGAGCACGCACGCGCTCACCTGGTGCCTCGCCAACGTCGTCTCCTCCTCCGGCGG
CGACACGCTCGTGCTGCTCCACGCCCGCCGCCCCCGCCCCGTCTACGCCGCCATGGACAG
CTCAGGGTACATGATGACCTCGGACGTGATGGCGAGCATGGACAAGTACGCCGCCGCCGT
CTCCGCCGCGGCGGTGGGCAAGGCCAAGCACATCTGCGCCGCTTTCCCTCACGTGACGGT
GGAGACGATGGTGGAGAGCGGGGACCCGCGCGACGTCATCTGCGACGCCACCGAGAAGAT
GGCCGCCGATCTGCTGGTCATGGGCACCCATGGATACGGCCTCATCCAGAGGGCGTTCCT
GGGAAGCGTGAGCAATCACTGTGCGCAGAACTGCAAATGCCCAGTGCTGATTGTCAAGAG
GCCAAAATAATAGTTGCTAAGTAATATACTTAGTACTGGTAATAAAGCTCAACTAATGCA
GAGCTTGCTAGTTTGATGTTTGTAAATATTGGCATGTCATGCTTGGTTTGTTGATCGAGA
ACAAAAGCTATATGTTGTTTGGTGGCATGGCAGCGTTCGATGTTCAGCGACCGATGCGGA
TCTGCGGATCTGTTGGCACCTTGTAATGGTTGAAATTTGCAGGCTATTTGACTTTTTCT