Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0301700-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:11089065:11093987:-1 gene:Os01g0301700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os01t0301700-01);Hypothetical conserved gene. (Os01t0301700-02)
Sequence	ATGCTGCGCGCGGCGGCCACGGCGGCGCTCCGGCGCCTCCCACAGTCACAGGCCCCGAGG AGACAAGCGCGCGGTCTCCAGTACGCGAGCCCGGAGCGGCGACCGCTGGATGGTGCGAGG TGGGCGCTCTACGCGAGGCTGTCGGCGCACCTGCCGTCGGGTGGAATGGTGGAGGAGCTC GGCCGGTGGCTCCGCGAGAGGCGCCCGCTCTCGGAGGAGCAGGTCCTCTTCTGCGTCCGC AGGTTCCGCAAGTTCAAGCAGAACAAGCACGCCCTCCAGTTGATGGACTGGATGGAAGCT CGTGGAGTGAACTTGGAGCTCAAGCATCATGCTTTGCGGCTTGACCTTGTTAGCAAACTG AATGGTATACATGCTGCAGAAGAGTACTTCGGGAGCCTTCCAGATATTTTCAGGTCAAAG CAAACTTATTCCACTCTGCTTAACTGCTATGCTGAGCACCGGATGGCAGAGAAAGGCCTA GAACTCTATGAAAATATGAAAGCGATGAACATTGTTTCAGATATATTGGTGTACAACAAT TTGATGTGCTTATACCTGAAGACAGATCAACCAGAGAAAATCCCCACTACAGTTGTAAAA ATGCAAGAAAGTGGTATACAACCAAACAAGTTTTCATACTTTGTGCTAACAGAAAGCTAC ATTATGATGAATGACATAGAGTCCGCTGAGAAGGTCCTGAAAGAATTGCAGGAGGTAAAT TCAGTTCCTTGGTCCTTGTATGCTACACTTGCTAACGGTTATAATAAGCTGCAGCAGTTT GACAAGGCAGAATTCACCCTTAAGAAAGCTGAGGAAGTTCTGGACAAGCATGACGTTTTC TCTTGGCATTGTCTTCTCTCCCACTATGCCAATTCCGGCAACTTGTCCGAGGTCAAGAGA ATCTGGGAGTCTTTAAAGTCTGCATTCAAGAAATGCACAAATAGAAGCTATCTAGTGATG CTTAAAGCTCTGAAAAAGTTGGATGATTTTGACACCCTGCAGCAAATCTTTCAGGAATGG GAATCAAGCCATGAGCACTATGACATGAAAATACCAAATATTATCATCCAAGCTTACCTT GATAAGGGCATGGTAGACAAAGCTGAGGCTATGCGTCAGACAACCATGGCTCAGGATCAT TCCAACTACAGAACATTTTGCATATTCGCAGAATTCTATTTGGAGAAATCTAAAATGAAT GAGGCACTGCAGGTCTGGAAAGATGCAAAGAAAATGGTGAAGGGGCAGGATTGGGTGCCA GAAAAGCTTGTGAACAGATATCTGAAGCACTTTGAGGATTCAAAGGATGTGGATGGGATG GAGACGTTCTGTGAATGCCTGAAGAATCTCGGTCGCCTTGATGCTGAAGCCTATGAAGCC TTGATCCGGACCTATATATCTGTAGGTAGAACAAATCCATCCATCCCTCAGCGCATGGAA GTTGACAGGGTTGATATTCGGCCTGAAATGTTTGAATCGCTCAAAGCTATCTCCACTGAA GGAGTTGAGAGTTGA

Peptide Sequence

PEP ID	Os01t0301700-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:11089065:11093987:-1 gene:Os01g0301700 transcript:Os01t0301700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os01t0301700-01);Hypothetical conserved gene. (Os01t0301700-02)
Sequence	MLRAAATAALRRLPQSQAPRRQARGLQYASPERRPLDGARWALYARLSAHLPSGGMVEEL GRWLRERRPLSEEQVLFCVRRFRKFKQNKHALQLMDWMEARGVNLELKHHALRLDLVSKL NGIHAAEEYFGSLPDIFRSKQTYSTLLNCYAEHRMAEKGLELYENMKAMNIVSDILVYNN LMCLYLKTDQPEKIPTTVVKMQESGIQPNKFSYFVLTESYIMMNDIESAEKVLKELQEVN SVPWSLYATLANGYNKLQQFDKAEFTLKKAEEVLDKHDVFSWHCLLSHYANSGNLSEVKR IWESLKSAFKKCTNRSYLVMLKALKKLDDFDTLQQIFQEWESSHEHYDMKIPNIIIQAYL DKGMVDKAEAMRQTTMAQDHSNYRTFCIFAEFYLEKSKMNEALQVWKDAKKMVKGQDWVP EKLVNRYLKHFEDSKDVDGMETFCECLKNLGRLDAEAYEALIRTYISVGRTNPSIPQRME VDRVDIRPEMFESLKAISTEGVES

Transcript Sequence

Transcript ID	Os01t0301700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:11089065:11093987:-1 gene:Os01g0301700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os01t0301700-01);Hypothetical conserved gene. (Os01t0301700-02)
Sequence	ACAGATCCTCCAAAACCAAAAGAACTGCCTAGCGCCTAGCGATGCTGCGCGCGGCGGCCA CGGCGGCGCTCCGGCGCCTCCCACAGTCACAGGCCCCGAGGAGACAAGCGCGCGGTCTCC AGTACGCGAGCCCGGAGCGGCGACCGCTGGATGGTGCGAGGTGGGCGCTCTACGCGAGGC TGTCGGCGCACCTGCCGTCGGGTGGAATGGTGGAGGAGCTCGGCCGGTGGCTCCGCGAGA GGCGCCCGCTCTCGGAGGAGCAGGTCCTCTTCTGCGTCCGCAGGTTCCGCAAGTTCAAGC AGAACAAGCACGCCCTCCAGTTGATGGACTGGATGGAAGCTCGTGGAGTGAACTTGGAGC TCAAGCATCATGCTTTGCGGCTTGACCTTGTTAGCAAACTGAATGGTATACATGCTGCAG AAGAGTACTTCGGGAGCCTTCCAGATATTTTCAGGTCAAAGCAAACTTATTCCACTCTGC TTAACTGCTATGCTGAGCACCGGATGGCAGAGAAAGGCCTAGAACTCTATGAAAATATGA AAGCGATGAACATTGTTTCAGATATATTGGTGTACAACAATTTGATGTGCTTATACCTGA AGACAGATCAACCAGAGAAAATCCCCACTACAGTTGTAAAAATGCAAGAAAGTGGTATAC AACCAAACAAGTTTTCATACTTTGTGCTAACAGAAAGCTACATTATGATGAATGACATAG AGTCCGCTGAGAAGGTCCTGAAAGAATTGCAGGAGGTAAATTCAGTTCCTTGGTCCTTGT ATGCTACACTTGCTAACGGTTATAATAAGCTGCAGCAGTTTGACAAGGCAGAATTCACCC TTAAGAAAGCTGAGGAAGTTCTGGACAAGCATGACGTTTTCTCTTGGCATTGTCTTCTCT CCCACTATGCCAATTCCGGCAACTTGTCCGAGGTCAAGAGAATCTGGGAGTCTTTAAAGT CTGCATTCAAGAAATGCACAAATAGAAGCTATCTAGTGATGCTTAAAGCTCTGAAAAAGT TGGATGATTTTGACACCCTGCAGCAAATCTTTCAGGAATGGGAATCAAGCCATGAGCACT ATGACATGAAAATACCAAATATTATCATCCAAGCTTACCTTGATAAGGGCATGGTAGACA AAGCTGAGGCTATGCGTCAGACAACCATGGCTCAGGATCATTCCAACTACAGAACATTTT GCATATTCGCAGAATTCTATTTGGAGAAATCTAAAATGAATGAGGCACTGCAGGTCTGGA AAGATGCAAAGAAAATGGTGAAGGGGCAGGATTGGGTGCCAGAAAAGCTTGTGAACAGAT ATCTGAAGCACTTTGAGGATTCAAAGGATGTGGATGGGATGGAGACGTTCTGTGAATGCC TGAAGAATCTCGGTCGCCTTGATGCTGAAGCCTATGAAGCCTTGATCCGGACCTATATAT CTGTAGGTAGAACAAATCCATCCATCCCTCAGCGCATGGAAGTTGACAGGGTTGATATTC GGCCTGAAATGTTTGAATCGCTCAAAGCTATCTCCACTGAAGGAGTTGAGAGTTGAGACT AGGGGCATGTCTGGATTTTTGCCATCTACTACATTTTGGTAAGGCAACAAAATAGGCAAA TACCAAACCTACTCTAACCATTACAATTATATGGTCACATTTCGTAATTCGGGGAGCAGT CATACCCTTGATTTTATTATTTTTTTAAGATCCTTCGCTATGGTATCATCTCATAAGTCA TAGCGAGTGTCACGGACAATTTGTTTGGTGTTGACGCAGGGTGGTTCTCAGGAAAACCCT TTCAGTTGGAGGTCCTTGAAATGGCTGGAGATGAAATTGATGTCAAGCAGCCCACCCAGC AGCACTTTAAGCACTAACAAGTTATAATCATGGCTGAAAATGAACTGAAGGATGATGGTG TTAGGTTGCAAAATCGTTGGAAGACGGGACACTGGGATATGAAGGAGCTTGATGCTAGCA TGAATATGCTGCAAAGGGTGGGAGCTCGGTGCTTTACCCACGCAATCACTAACAAGCCAG GTGGAATTACATCCATTCAGAACTTGGTGGATGTGATGGATTCAGTTGCATGCAGGGCCT GACAGTTGAGGTGGACGATTAGTCATGTTTAGATTAACTGGTAGCTCCTACCTTACTCTC GAATTAGCTTCAAAATGTTTCCCTTGCCAGATTGAATTTTCTTCGATTTACTCCGTGCAA TATATATCAACGTGTTTTGTACATGCACACGTTTAGTTCTATTTTGCACAGCTTAAGATC CATTTTTTTT