Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0301500-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:11078206:11083482:-1 gene:Os01g0301500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0301500-01)
Sequence	ATGGCACCGCCCACGCCCGGCCTCTCGGCCGCCGCTCGCCTCGTCATCCGCCGCTTCCTC ACCACCGGCGCGGAGGCCGCGGAGGCGGTGGCTCCCCACGCCGCGAGGGCGAAGGGGAAG AAGGACAAGCGGCCGCTGGGTCGGCGGCTGCTGGAGCTCGGGGACGCGGCGGGGGAAGGG AGCGTGTCGCGGGTGCTGGACGAGTGGGTGCGCGAAGGGCGGGAGGAGGCGATCGCCGCG GCGGATCTCGCCAAGTGCGCCAGGGATCTCCACAAGGTCAAGCGCGACGCCCACGCCCTC GAGTTGATGGATTGGATGGTTAATACAAAGGGTATGAGCATGACATATGCTCGATATGCA TTGCATTTGGAACTCCTTTACAGTGTGTATGGCATTGAGGCTGCAGAGGAATACTTTTCT GGCATCCCTTCTTTTACTCGAGACCAGAACCATCGAACTTATGGTGCACTTTTGAACTGT TATTGCTCTGCTAAAATGGAAGAGAAAGCTACAAATATCTATCGCAGGATGGACGAACTT GGCATCCCATCCAGTACTAAGCTCATGAATAACCTGATGGGCCTTTACCTGGAGCTAGGC CAACATAGCAAGGTGGCTAACCTGTTTGATGAGATGAAAGAGAGGAATGTTCAACCGGAT GAGCTCACATGCTGCATTCTGATGCGTAGTCATGCAGCACACAACAAGATAGATACTGTC AAAGAGACTTTTTACAACATGTCACTATTAGATGTGCCTAAACAATGGTCTATATTTAGA ACACTCGGTTCCATCTATATGAATGCTGGTATGGTTGAAGAGGCAGAATTGGCTTTTATG AGAGCTCAGGAATTTCTCGGTTTTGATCATGGCAGGCACCCTTTTTATTTCCTTATGAGG CAATTTGCATCAATAGGCAATTTGAGAGGGGTCAACAGAGTGTGGAAAGACATAAAAATG ACTTTTTCTTATAACAGGACTAACTTCAGCTACCTCCTCATGCTTCAATGTCTCTATAAA CTCGGTGACACCGATCGGATGAAGGAGATTTATAAGGAGTGGGAATATCGTTATGAAAAC TATGACCCGAGGCTGACAAATATGTTGACCCGAGCTCATCTAAGGAATGGCATGACCAAT GAAGCTGAATTGTTGTGGGAGAAGGTCAAGGAAAGAGGTGGTGATTTCGATTTCGAAACA TGTGAGCTGTTTCGGGAGCATTACTTGGGGAAAGGGGACACGACCTCCGCTTTGAAATGG GCTGAAAAGATGACCAAACTTCCCAAGAAACAAGGGAAGCAAGATCAGGAGACCTGCAAG TTCTTGAAGTGGTTCGAAGAAGACAAGGTTGTGGAAGGTGCCAAAAGTACCTGCAACTGC AGCAACTGCTTGAGGAATGCGGACAGCAAGACATGTGAACCCCTCCTGGCTCCTGCAGAC CTACTCCCCGACTGA

Peptide Sequence

PEP ID	Os01t0301500-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:11078206:11083482:-1 gene:Os01g0301500 transcript:Os01t0301500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0301500-01)
Sequence	MAPPTPGLSAAARLVIRRFLTTGAEAAEAVAPHAARAKGKKDKRPLGRRLLELGDAAGEG SVSRVLDEWVREGREEAIAAADLAKCARDLHKVKRDAHALELMDWMVNTKGMSMTYARYA LHLELLYSVYGIEAAEEYFSGIPSFTRDQNHRTYGALLNCYCSAKMEEKATNIYRRMDEL GIPSSTKLMNNLMGLYLELGQHSKVANLFDEMKERNVQPDELTCCILMRSHAAHNKIDTV KETFYNMSLLDVPKQWSIFRTLGSIYMNAGMVEEAELAFMRAQEFLGFDHGRHPFYFLMR QFASIGNLRGVNRVWKDIKMTFSYNRTNFSYLLMLQCLYKLGDTDRMKEIYKEWEYRYEN YDPRLTNMLTRAHLRNGMTNEAELLWEKVKERGGDFDFETCELFREHYLGKGDTTSALKW AEKMTKLPKKQGKQDQETCKFLKWFEEDKVVEGAKSTCNCSNCLRNADSKTCEPLLAPAD LLPD

Transcript Sequence

Transcript ID	Os01t0301500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:11078206:11083482:-1 gene:Os01g0301500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0301500-01)
Sequence	AAACAGAAACCCTCTAAACCCATGGCACCGCCCACGCCCGGCCTCTCGGCCGCCGCTCGC CTCGTCATCCGCCGCTTCCTCACCACCGGCGCGGAGGCCGCGGAGGCGGTGGCTCCCCAC GCCGCGAGGGCGAAGGGGAAGAAGGACAAGCGGCCGCTGGGTCGGCGGCTGCTGGAGCTC GGGGACGCGGCGGGGGAAGGGAGCGTGTCGCGGGTGCTGGACGAGTGGGTGCGCGAAGGG CGGGAGGAGGCGATCGCCGCGGCGGATCTCGCCAAGTGCGCCAGGGATCTCCACAAGGTC AAGCGCGACGCCCACGCCCTCGAGTTGATGGATTGGATGGTTAATACAAAGGGTATGAGC ATGACATATGCTCGATATGCATTGCATTTGGAACTCCTTTACAGTGTGTATGGCATTGAG GCTGCAGAGGAATACTTTTCTGGCATCCCTTCTTTTACTCGAGACCAGAACCATCGAACT TATGGTGCACTTTTGAACTGTTATTGCTCTGCTAAAATGGAAGAGAAAGCTACAAATATC TATCGCAGGATGGACGAACTTGGCATCCCATCCAGTACTAAGCTCATGAATAACCTGATG GGCCTTTACCTGGAGCTAGGCCAACATAGCAAGGTGGCTAACCTGTTTGATGAGATGAAA GAGAGGAATGTTCAACCGGATGAGCTCACATGCTGCATTCTGATGCGTAGTCATGCAGCA CACAACAAGATAGATACTGTCAAAGAGACTTTTTACAACATGTCACTATTAGATGTGCCT AAACAATGGTCTATATTTAGAACACTCGGTTCCATCTATATGAATGCTGGTATGGTTGAA GAGGCAGAATTGGCTTTTATGAGAGCTCAGGAATTTCTCGGTTTTGATCATGGCAGGCAC CCTTTTTATTTCCTTATGAGGCAATTTGCATCAATAGGCAATTTGAGAGGGGTCAACAGA GTGTGGAAAGACATAAAAATGACTTTTTCTTATAACAGGACTAACTTCAGCTACCTCCTC ATGCTTCAATGTCTCTATAAACTCGGTGACACCGATCGGATGAAGGAGATTTATAAGGAG TGGGAATATCGTTATGAAAACTATGACCCGAGGCTGACAAATATGTTGACCCGAGCTCAT CTAAGGAATGGCATGACCAATGAAGCTGAATTGTTGTGGGAGAAGGTCAAGGAAAGAGGT GGTGATTTCGATTTCGAAACATGTGAGCTGTTTCGGGAGCATTACTTGGGGAAAGGGGAC ACGACCTCCGCTTTGAAATGGGCTGAAAAGATGACCAAACTTCCCAAGAAACAAGGGAAG CAAGATCAGGAGACCTGCAAGTTCTTGAAGTGGTTCGAAGAAGACAAGGTTGTGGAAGGT GCCAAAAGTACCTGCAACTGCAGCAACTGCTTGAGGAATGCGGACAGCAAGACATGTGAA CCCCTCCTGGCTCCTGCAGACCTACTCCCCGACTGACAAGACAAGCCGTTCGCTGCTTCA ACGGATCAAAGAAGATTCAATTGAAGTGTTTGGTAGTCCATAGAAGTTTTTTTTTCACAT ATCTGAAAATTGCAAAATTAACCGATCCACGCATCTGATAACGATACTTTGTTTTGGAAA GTACCCAAATAATGTAACTTACTTCCTCCGTTTTATAATGTAAGTCATTTTAGCATTGCC CACATTC