Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0301000-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:11065094:11068774:-1 gene:Os01g0301000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0301000-01)
Sequence	ATGGCGCCGCCCGTCCCCACTGCCGCCGCTCGCCTCGTCCTCCGCCGCCTCCTCTCCACG GCGGTCGCCGAGGCGGAGGCGGCGGCCGTGGCTCCCGCCGCCGAGAAGGCCGCGGCGAAG GGCGCCAAGACGGCGGCGGCGGCGGGGGAGGAGAAGGACGCGCGGTCGCTGTACCGGCGG CTCTCGGCGCTCGGGGGCGCGGGGGAAGGGAGCGTGTCGCGGGTGATGAACAAGTGGGTG CGCGAGGGGCGGGAGGCGCGCGCGGCGGATCTCGCCAAGTACGTCAAGGAGCTTCGCAAG TACAAGCGCCACGCCCACGCCCTCGAGTTGATGGAATGGATGGTTAACACTAAGGGTATG AACATGTCATACACTAACCATGCCATACGTTTGGATCTCATTTATAAAGTGCGTGGCATT GAAGCAGCAGAACAATACTTTGCTGGCCTCCCTGATCCAGGCAAGAACCATAAAACTTAT GGTGCACTTTTGAACTGTTATTGCTCTGCTAAAATGGAAGACAAAGCAACAGACATCTAT CGCAAGATGGACGAACTAGGAATCTCATCCAGTACTCTTCCTATCAACAACCTGATGTCT CTTTACGTGAAGATAGGCCAGCATAGGAAGGTTACAAGCCTGTTTGAGGAGATGAAAGTG AAGAATGTTAAACCGGATAACCTCACATGCTGCCTGCTGATGAGTAGCTATGCAGCATTG AACAAGATAGATACTGTTGGAGAGGTTCTAAAAGAAATGGAAGAAAAAAAAGTGGCTCTA GGGTGGTCTGCATATAGCACACTCGCTTCCCTCTATGTGAATGCTAATATGGTTGAAGAA GCGGAATCTGCTTTGAAGAAACTCGAGAGTCTCATCGATGTTCAAGCTGGCAGGCAGCCT TTTGATTTCCTTATGAGCCTATATGCATCAGTAGGCAATCTGAGTGAGGTCAACAGAGTG TGGAACCTGATAAAGGCTAATTTTCAGAAGGTGACTAACACCAGCTACCTCGGCATGCTT CAAGCTCTTTATAAACTCAATGACGATGATCGCATGAAGCAGATTTATGAGGATTGGGAA TCTAATTATGAAAATTATGATGCGAGGCTGACAAATATGATGACCCGAGCACATCTAAGA AATGGCTTGACCAAGGAAGCTGAATTACTATGGGAGAAGGTTAAGGAAAAAGGTGCAGAA TTTGATTCCAAAACATGTGAGTTGTTTCTAGAGCATTACATGGGGAAAGGGGACATGACC TCCGCTTTGAACTGGGTTGAAAATATGACCAAACTTCCCAGGAAGAAATCGAAGCTAGAT CAGGAGAAGATCAGCTGTTTCTTGAAGTATTTCGAAGAGCACAAGGATGTGGAAGGTGCC GAAAGGTTTCTCAACTGCTTGAGAACGTCAGGATGCATTGATGGCAAGGCATATGAGTCC CTCCTGCGGACCTACTTGGCGGCTGGCAAGACAAGCCGTTCGATCCGCCAAATGATCAAG GAAGATAAGATTGAGATATGCTATGGCATCGGGAAATTACTCAAGAGGATTGCCGACAAG GGACGCTGA

Peptide Sequence

PEP ID	Os01t0301000-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:11065094:11068774:-1 gene:Os01g0301000 transcript:Os01t0301000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0301000-01)
Sequence	MAPPVPTAAARLVLRRLLSTAVAEAEAAAVAPAAEKAAAKGAKTAAAAGEEKDARSLYRR LSALGGAGEGSVSRVMNKWVREGREARAADLAKYVKELRKYKRHAHALELMEWMVNTKGM NMSYTNHAIRLDLIYKVRGIEAAEQYFAGLPDPGKNHKTYGALLNCYCSAKMEDKATDIY RKMDELGISSSTLPINNLMSLYVKIGQHRKVTSLFEEMKVKNVKPDNLTCCLLMSSYAAL NKIDTVGEVLKEMEEKKVALGWSAYSTLASLYVNANMVEEAESALKKLESLIDVQAGRQP FDFLMSLYASVGNLSEVNRVWNLIKANFQKVTNTSYLGMLQALYKLNDDDRMKQIYEDWE SNYENYDARLTNMMTRAHLRNGLTKEAELLWEKVKEKGAEFDSKTCELFLEHYMGKGDMT SALNWVENMTKLPRKKSKLDQEKISCFLKYFEEHKDVEGAERFLNCLRTSGCIDGKAYES LLRTYLAAGKTSRSIRQMIKEDKIEICYGIGKLLKRIADKGR

Transcript Sequence

Transcript ID	Os01t0301000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:11065094:11068774:-1 gene:Os01g0301000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0301000-01)
Sequence	TCCCCCATCTTCTTCTTCTCTCCCGCACTCCAAAGTCGAAACCCTCCCAAAACCCTAAAC CCCCCATGGCGCCGCCCGTCCCCACTGCCGCCGCTCGCCTCGTCCTCCGCCGCCTCCTCT CCACGGCGGTCGCCGAGGCGGAGGCGGCGGCCGTGGCTCCCGCCGCCGAGAAGGCCGCGG CGAAGGGCGCCAAGACGGCGGCGGCGGCGGGGGAGGAGAAGGACGCGCGGTCGCTGTACC GGCGGCTCTCGGCGCTCGGGGGCGCGGGGGAAGGGAGCGTGTCGCGGGTGATGAACAAGT GGGTGCGCGAGGGGCGGGAGGCGCGCGCGGCGGATCTCGCCAAGTACGTCAAGGAGCTTC GCAAGTACAAGCGCCACGCCCACGCCCTCGAGTTGATGGAATGGATGGTTAACACTAAGG GTATGAACATGTCATACACTAACCATGCCATACGTTTGGATCTCATTTATAAAGTGCGTG GCATTGAAGCAGCAGAACAATACTTTGCTGGCCTCCCTGATCCAGGCAAGAACCATAAAA CTTATGGTGCACTTTTGAACTGTTATTGCTCTGCTAAAATGGAAGACAAAGCAACAGACA TCTATCGCAAGATGGACGAACTAGGAATCTCATCCAGTACTCTTCCTATCAACAACCTGA TGTCTCTTTACGTGAAGATAGGCCAGCATAGGAAGGTTACAAGCCTGTTTGAGGAGATGA AAGTGAAGAATGTTAAACCGGATAACCTCACATGCTGCCTGCTGATGAGTAGCTATGCAG CATTGAACAAGATAGATACTGTTGGAGAGGTTCTAAAAGAAATGGAAGAAAAAAAAGTGG CTCTAGGGTGGTCTGCATATAGCACACTCGCTTCCCTCTATGTGAATGCTAATATGGTTG AAGAAGCGGAATCTGCTTTGAAGAAACTCGAGAGTCTCATCGATGTTCAAGCTGGCAGGC AGCCTTTTGATTTCCTTATGAGCCTATATGCATCAGTAGGCAATCTGAGTGAGGTCAACA GAGTGTGGAACCTGATAAAGGCTAATTTTCAGAAGGTGACTAACACCAGCTACCTCGGCA TGCTTCAAGCTCTTTATAAACTCAATGACGATGATCGCATGAAGCAGATTTATGAGGATT GGGAATCTAATTATGAAAATTATGATGCGAGGCTGACAAATATGATGACCCGAGCACATC TAAGAAATGGCTTGACCAAGGAAGCTGAATTACTATGGGAGAAGGTTAAGGAAAAAGGTG CAGAATTTGATTCCAAAACATGTGAGTTGTTTCTAGAGCATTACATGGGGAAAGGGGACA TGACCTCCGCTTTGAACTGGGTTGAAAATATGACCAAACTTCCCAGGAAGAAATCGAAGC TAGATCAGGAGAAGATCAGCTGTTTCTTGAAGTATTTCGAAGAGCACAAGGATGTGGAAG GTGCCGAAAGGTTTCTCAACTGCTTGAGAACGTCAGGATGCATTGATGGCAAGGCATATG AGTCCCTCCTGCGGACCTACTTGGCGGCTGGCAAGACAAGCCGTTCGATCCGCCAAATGA TCAAGGAAGATAAGATTGAGATATGCTATGGCATCGGGAAATTACTCAAGAGGATTGCCG ACAAGGGACGCTGAAATGTTTATCCTCGGTAATTTTACTTTGTCGGTGACACGTGATTCT TCGGCGAGCGGCACAAAGCAGATTCGTTTGAGTGAACTGTTCTCCCTTCTTCCTACTGCT CCATGTAGAGGATGATATACCTCATGGCTAGGATGCTGTTCCAGCCTTTTCTTGCTTTTT TTTTTCAAGAAGCAGAGGCATGCTAGGGTAAAGGGTTTTTTCTTCAAGTGCAACGTGTAG TCTTGTCTGAGGAGGCTTTTCTCCAACACTTCTTTTTTGCTTACTTTCTGAACGAAATGG CTTCTCCAGACATACAGTACTGAAGCAAGAATCCTACTACAGAATCGTTGCTGTTTCC