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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0299400-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:10977198:10979778:1 gene:Os01g0299400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sterile alpha motif homology domain containing protein. (Os01t0299400-01)
Sequence

ATGGCTCTCGCGTGCGCATCGCGCCGCCTCCTCGCCGGCGCCGGAACTCCGGCGAGATCC
TTCCACTCCCAGCCCTACCAAGCCAAGGTCGGCGTGGTGGAGTTCCTCAACGGGGTCGGG
AAGGGGGTGGAAACGCACGCCGCGAAGGTGGAGGAGGCGGTGGGAGGCGACCTCCAGAGG
CTCCTCGAGACCCGCACGCTGCGGCTCAAGAAGCTCGGCATCCCCTGCAAGCATAGGAAG
TTAATTTTGAGTTTTGCTCACAAGTATCGTCTTGGTCTTTGGAAGCCCCAAGCAGAAGCG
AAGAAAGCGCAATGA

Peptide Sequence

PEP ID

Os01t0299400-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:10977198:10979778:1 gene:Os01g0299400 transcript:Os01t0299400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sterile alpha motif homology domain containing protein. (Os01t0299400-01)
Sequence

MALACASRRLLAGAGTPARSFHSQPYQAKVGVVEFLNGVGKGVETHAAKVEEAVGGDLQR
LLETRTLRLKKLGIPCKHRKLILSFAHKYRLGLWKPQAEAKKAQ

Transcript Sequence

Transcript ID

Os01t0299400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:10977198:10979778:1 gene:Os01g0299400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sterile alpha motif homology domain containing protein. (Os01t0299400-01)
Sequence

CTCCGCGTCTCTCTCCAGCTTCTCTCTCCCCCATGGCTCTCGCGTGCGCATCGCGCCGCC
TCCTCGCCGGCGCCGGAACTCCGGCGAGATCCTTCCACTCCCAGCCCTACCAAGCCAAGG
TCGGCGTGGTGGAGTTCCTCAACGGGGTCGGGAAGGGGGTGGAAACGCACGCCGCGAAGG
TGGAGGAGGCGGTGGGAGGCGACCTCCAGAGGCTCCTCGAGACCCGCACGCTGCGGCTCA
AGAAGCTCGGCATCCCCTGCAAGCATAGGAAGTTAATTTTGAGTTTTGCTCACAAGTATC
GTCTTGGTCTTTGGAAGCCCCAAGCAGAAGCGAAGAAAGCGCAATGAAGTTGAGTTGTCT
TGAAGTGGGTCACTATGAAAACTATCAGCTGTCATTATACTTAACTGGGAAAATGCAATG
AAGTTATTTTCTGATTTCTCCTGAAGTGCTCTACTTGCAAAATGATTTGCTATCGCTGGA
CTTAAGAACTTGTCAGACATTGAGCAGTTGCAGTGCAATTTCTATGC