Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0297200-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:10891810:10893684:1 gene:Os01g0297200 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, AAA-type, core domain containing protein. (Os01t0297200-01)
Sequence	ATGGCTCTCTCGGCCGAGACGGGCAAAGTTGTCCAGTGGCGGCGCTGGGCGTTCGCCAAC CTGGGCTCGGTGCTGTCCAACTTCGGCTCGCTGTGGCTCCTCCTGGCGCCGCTGCTCGCC GCCTACGCGCCGCGGCGGCTGTTCAAGACCTACTTCAACCTCTTCCTCCGCCGGCACGCC CGGCGCCTCCTCGCCGTCGTCGACCCCTACGTCACCGTCGACGTCTCCGAGCCGGGCGGC GCCAGCGCGCACTACTCCCGGTACGGCCGCGTCACCGACAGCGGCGACAGCACCTACGAG GAGGTGAAGGCGTACCTGAGCGACGGGTGCGCGGGGGAGGCGCGCGAGCTCCGCGCCGAG GGCGCGTCCGAGGGCGACGGCGTCGTGATCAGCATGCGCGACGGGCAGGACGTCGCCGAC GAGTTCCGGGGCGCCGCGCTGTGGTGGACGTCAGTGGTGCGGGAGGACGCGCAGGGGCAG CAGAGGGCGCACACCCGGCGGTGCCAGCGCCTCACGTTCCACCACCGCGACCGCCGCCTC GTCGTCGACGAGTACCTGCCGCACGTCCGCCGGAAGGGCCGCGAGATCCTCTTCAGCAAC CGCCGCCGACGCCTCTACACCAACAACAAATCCGGCGACTCCTTCCGGTACGATTACAAA GCATGGAGCTACATCGACTTCGACCACCCGACGACGTTCGACACGTTGGCCATGGACACG GCCAGGAAGAGGGAGATCATCGACGACCTCGACGCGTTCCGGAGCGACAGGGACTTCTAC CGGCGCGCCGGCAAGCCGTGGAAGCGGGGCTACCTGCTGCACGGCCCGCCGGGCACCGGC AAGTCCACCATGATCGCCGCCATGGCCAACTACCTCGACTACGACATCTACGACGTCGAG CTCACCGTGGTGAAGGACAACAACGACCTCCGCAGGCTGCTGATCGAGACGACCAGCAAG TCCATCATCGTCATCGAGGACATCGACTGCTCCCTCGACCTCACCGGCGACCGCGCCGCC ACGCAGCGGCGGGGGCGCCAGAACGACAGGGACGACGGCAGCAGGCGCCATGACCGTGAC GGCAGCATGGTGACCCTGTCCGGCCTGCTCAACTTCATCGACGGGCTCTGGTCGGCGTGC GGCGGCGAGCGGATCGTCGTGTTCACGACGAACCACGTCGACAAGCTCGACGCGGCGCTG ATCCGGCGGGGCAGGATGGACATGCGCATCGAGATGTCGTACTGCGGAATCGAGGCGTTC AAGACCCTCGCCAAGAACTACCTCGACGTCGACGACCACCGGCTGTTCGGCCCCGTCGGC GAGATCCTCGGCAGGGAGAGCATCACGCCGGCCGACGTCGCCGAGTGCCTCATGACGGCC AAGCGCGCCGGCTCCGATGACGAGTCCTCCCGCCTCGAGATCGTGATCGACGAGCTGAAG CAGACGGCAGAGGCGAATGCGAAGGCGAAGGCTGAGGCAGAGGCGAAGGCGAAGGCCGAG GCAGAGGAAGAAGCGAAGGCGGCAGAAATGGATCGTGACAACACTCGGGAAGAACAAAAT GGACGAAAGTCTCCCAAAATTTGA

Peptide Sequence

PEP ID	Os01t0297200-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:10891810:10893684:1 gene:Os01g0297200 transcript:Os01t0297200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, AAA-type, core domain containing protein. (Os01t0297200-01)
Sequence	MALSAETGKVVQWRRWAFANLGSVLSNFGSLWLLLAPLLAAYAPRRLFKTYFNLFLRRHA RRLLAVVDPYVTVDVSEPGGASAHYSRYGRVTDSGDSTYEEVKAYLSDGCAGEARELRAE GASEGDGVVISMRDGQDVADEFRGAALWWTSVVREDAQGQQRAHTRRCQRLTFHHRDRRL VVDEYLPHVRRKGREILFSNRRRRLYTNNKSGDSFRYDYKAWSYIDFDHPTTFDTLAMDT ARKREIIDDLDAFRSDRDFYRRAGKPWKRGYLLHGPPGTGKSTMIAAMANYLDYDIYDVE LTVVKDNNDLRRLLIETTSKSIIVIEDIDCSLDLTGDRAATQRRGRQNDRDDGSRRHDRD GSMVTLSGLLNFIDGLWSACGGERIVVFTTNHVDKLDAALIRRGRMDMRIEMSYCGIEAF KTLAKNYLDVDDHRLFGPVGEILGRESITPADVAECLMTAKRAGSDDESSRLEIVIDELK QTAEANAKAKAEAEAKAKAEAEEEAKAAEMDRDNTREEQNGRKSPKI

Transcript Sequence

Transcript ID	Os01t0297200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:10891810:10893684:1 gene:Os01g0297200 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, AAA-type, core domain containing protein. (Os01t0297200-01)
Sequence	GCACGCGCGGACAGAGAGCCAGAGACCCGTGTGCTGCGAACTCACCGCTTGGTGCCGTAC GTCGTCGCCGCCGTCCATGGCTCTCTCGGCCGAGACGGGCAAAGTTGTCCAGTGGCGGCG CTGGGCGTTCGCCAACCTGGGCTCGGTGCTGTCCAACTTCGGCTCGCTGTGGCTCCTCCT GGCGCCGCTGCTCGCCGCCTACGCGCCGCGGCGGCTGTTCAAGACCTACTTCAACCTCTT CCTCCGCCGGCACGCCCGGCGCCTCCTCGCCGTCGTCGACCCCTACGTCACCGTCGACGT CTCCGAGCCGGGCGGCGCCAGCGCGCACTACTCCCGGTACGGCCGCGTCACCGACAGCGG CGACAGCACCTACGAGGAGGTGAAGGCGTACCTGAGCGACGGGTGCGCGGGGGAGGCGCG CGAGCTCCGCGCCGAGGGCGCGTCCGAGGGCGACGGCGTCGTGATCAGCATGCGCGACGG GCAGGACGTCGCCGACGAGTTCCGGGGCGCCGCGCTGTGGTGGACGTCAGTGGTGCGGGA GGACGCGCAGGGGCAGCAGAGGGCGCACACCCGGCGGTGCCAGCGCCTCACGTTCCACCA CCGCGACCGCCGCCTCGTCGTCGACGAGTACCTGCCGCACGTCCGCCGGAAGGGCCGCGA GATCCTCTTCAGCAACCGCCGCCGACGCCTCTACACCAACAACAAATCCGGCGACTCCTT CCGGTACGATTACAAAGCATGGAGCTACATCGACTTCGACCACCCGACGACGTTCGACAC GTTGGCCATGGACACGGCCAGGAAGAGGGAGATCATCGACGACCTCGACGCGTTCCGGAG CGACAGGGACTTCTACCGGCGCGCCGGCAAGCCGTGGAAGCGGGGCTACCTGCTGCACGG CCCGCCGGGCACCGGCAAGTCCACCATGATCGCCGCCATGGCCAACTACCTCGACTACGA CATCTACGACGTCGAGCTCACCGTGGTGAAGGACAACAACGACCTCCGCAGGCTGCTGAT CGAGACGACCAGCAAGTCCATCATCGTCATCGAGGACATCGACTGCTCCCTCGACCTCAC CGGCGACCGCGCCGCCACGCAGCGGCGGGGGCGCCAGAACGACAGGGACGACGGCAGCAG GCGCCATGACCGTGACGGCAGCATGGTGACCCTGTCCGGCCTGCTCAACTTCATCGACGG GCTCTGGTCGGCGTGCGGCGGCGAGCGGATCGTCGTGTTCACGACGAACCACGTCGACAA GCTCGACGCGGCGCTGATCCGGCGGGGCAGGATGGACATGCGCATCGAGATGTCGTACTG CGGAATCGAGGCGTTCAAGACCCTCGCCAAGAACTACCTCGACGTCGACGACCACCGGCT GTTCGGCCCCGTCGGCGAGATCCTCGGCAGGGAGAGCATCACGCCGGCCGACGTCGCCGA GTGCCTCATGACGGCCAAGCGCGCCGGCTCCGATGACGAGTCCTCCCGCCTCGAGATCGT GATCGACGAGCTGAAGCAGACGGCAGAGGCGAATGCGAAGGCGAAGGCTGAGGCAGAGGC GAAGGCGAAGGCCGAGGCAGAGGAAGAAGCGAAGGCGGCAGAAATGGATCGTGACAACAC TCGGGAAGAACAAAATGGACGAAAGTCTCCCAAAATTTGAAGATACTGGAGATTTGCAAA TCGTCTTTACGGATTTGCTAGGTTCTGCGATGGACACGCAAACGAGTATTTACTGTTCAG TCTCATATTTGAACACAACGGGACAAAAATTGCTGTGGAACAATTGCAAAGGAGTTTCCT C