Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0296700-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:10872358:10874262:1 gene:Os01g0296700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 3, N-terminal domain containing protein. (Os01t0296700-01)
Sequence	ATCAACGGCGTCCCGGCCTGCGCCGACGCGCGCCTCCTCACGGAGACCGTCCGCCGCGAC TGGCAGCTCCACGGCTACATCGTCTCCGACTGCGACTCCGTCCGCGTCATGGTCAGGGAC GCCAAGTGGCTCGGCTACACCGGCGTCGAGGCCACCGCCGCCGCCATGAAGGCCGGCCTG GACCTCGACTGCGGCATGTTCTGGGAGGGCGTCCACGACTTCTTCACCACCTACGGCGTC GACGCCGTCCGGCAGGGGAAGCTCAAGGAGTCCGCCGTGGACAACGCGCTGACCAACCTC TACCTCACACTCATGAGGCTCGGCTTCTTCGACGGCATCCCGGAGCTCGAGTCCCTCGGC GCCGCCGACGTCTGCACCGAGGAGCACAAGGAGCTCGCCGCCGACGCCGCCAGGCAGGGG ATGGTGCTCCTCAAGAACGACGCCGCGCTGCTCCCGTTGTCGCCGGAGAAGGTCAATTCG GTGGCACTGTTCGGGCAGCTGCAACACATCAATGCCACCGACGTCATGCTTGGAGACTAC AGAGGTAAGCCTTGCAGGGTGGTGACGCCGTACGACGGCGTACGGAAGGTGGTCAGCTCG ACGTCGGTGCACGCATGCGACAAGGGATCGTGCGACACGGCGGCCGCGGCGGCGAAGACG GTGGACGCGACCATCGTCGTCGCCGGCCTGAACATGAGCGTGGAGAGGGAGAGCAACGAC AGGGAAGACCTCCTCCTGCCGTGGAGCCAGGCCAGCTGGATCAACGCCGTCGCCGAGGCC TCGCCGTCGCCGATCGTCCTGGTGATCATGTCCGCCGGCGGCGTCGACGTCTCCTTCGCC CAGGACAACCCCAAGATCGGCGCCGTCGTCTGGGCCGGCTACCCCGGCGAGGAAGGCGGC ACGGCCATCGCCGACGTGCTCTTCGGAAAATACAATCCAGGAGGAAGATTGCCGCTGACG TGGTACAAGAACGAGTACGTGAGCAAGATCCCGATGACGTCCATGGCGCTGCGGCCGGAC GCCGAGCACGGCTACCCCGGCCGGACCTACAAGTTCTACGGCGGCGCCGACGTGCTCTAC CCGTTCGGCCACGGCCTCAGCTACACCAACTTCACCTACGCGTCGGCCACCGCCGCCGCC CCGGTCACGGTCAAGGTCGGCGCGTGGGAGTACTGCAAGCAGCTCACCTACAAGGCCGGG GTGTCCTCGCCGCCGGCGTGCCCGGCCGTGAACGTGGCCAGCCACGCGTGCCAGGAGGAG GTCAGCTTCGCCGTCACGGTGGCCAACACGGGCGGCAGGGACGGCACCCACGTCGTGCCG ATGTACACGGCGCCGCCGGCGGAGGTGGACGGCGCGCCGCGGAAGCAGCTGGTGGCGTTC CGGCGGGTGCGGGTGGCCGCGGGCGCCGCCGTCGAGGTGGCCTTCGCGCTCAACGTGTGC AAGGCGTTCGCGATCGTCGAGGAGACGGCGTACACCGTCGTGCCGTCGGGAGTCAGCAGG GTCCTCGTCGGAGACGACGCGCTGTCGCTGTCCTTCCCTGTTCAGATCGACCTGCAGGCG GCAGCATAG

Peptide Sequence

PEP ID	Os01t0296700-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:10872358:10874262:1 gene:Os01g0296700 transcript:Os01t0296700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 3, N-terminal domain containing protein. (Os01t0296700-01)
Sequence	INGVPACADARLLTETVRRDWQLHGYIVSDCDSVRVMVRDAKWLGYTGVEATAAAMKAGL DLDCGMFWEGVHDFFTTYGVDAVRQGKLKESAVDNALTNLYLTLMRLGFFDGIPELESLG AADVCTEEHKELAADAARQGMVLLKNDAALLPLSPEKVNSVALFGQLQHINATDVMLGDY RGKPCRVVTPYDGVRKVVSSTSVHACDKGSCDTAAAAAKTVDATIVVAGLNMSVERESND REDLLLPWSQASWINAVAEASPSPIVLVIMSAGGVDVSFAQDNPKIGAVVWAGYPGEEGG TAIADVLFGKYNPGGRLPLTWYKNEYVSKIPMTSMALRPDAEHGYPGRTYKFYGGADVLY PFGHGLSYTNFTYASATAAAPVTVKVGAWEYCKQLTYKAGVSSPPACPAVNVASHACQEE VSFAVTVANTGGRDGTHVVPMYTAPPAEVDGAPRKQLVAFRRVRVAAGAAVEVAFALNVC KAFAIVEETAYTVVPSGVSRVLVGDDALSLSFPVQIDLQAAA

Transcript Sequence

Transcript ID	Os01t0296700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:10872358:10874262:1 gene:Os01g0296700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 3, N-terminal domain containing protein. (Os01t0296700-01)
Sequence	ATCAACGGCGTCCCGGCCTGCGCCGACGCGCGCCTCCTCACGGAGACCGTCCGCCGCGAC TGGCAGCTCCACGGCTACATCGTCTCCGACTGCGACTCCGTCCGCGTCATGGTCAGGGAC GCCAAGTGGCTCGGCTACACCGGCGTCGAGGCCACCGCCGCCGCCATGAAGGCCGGCCTG GACCTCGACTGCGGCATGTTCTGGGAGGGCGTCCACGACTTCTTCACCACCTACGGCGTC GACGCCGTCCGGCAGGGGAAGCTCAAGGAGTCCGCCGTGGACAACGCGCTGACCAACCTC TACCTCACACTCATGAGGCTCGGCTTCTTCGACGGCATCCCGGAGCTCGAGTCCCTCGGC GCCGCCGACGTCTGCACCGAGGAGCACAAGGAGCTCGCCGCCGACGCCGCCAGGCAGGGG ATGGTGCTCCTCAAGAACGACGCCGCGCTGCTCCCGTTGTCGCCGGAGAAGGTCAATTCG GTGGCACTGTTCGGGCAGCTGCAACACATCAATGCCACCGACGTCATGCTTGGAGACTAC AGAGGTAAGCCTTGCAGGGTGGTGACGCCGTACGACGGCGTACGGAAGGTGGTCAGCTCG ACGTCGGTGCACGCATGCGACAAGGGATCGTGCGACACGGCGGCCGCGGCGGCGAAGACG GTGGACGCGACCATCGTCGTCGCCGGCCTGAACATGAGCGTGGAGAGGGAGAGCAACGAC AGGGAAGACCTCCTCCTGCCGTGGAGCCAGGCCAGCTGGATCAACGCCGTCGCCGAGGCC TCGCCGTCGCCGATCGTCCTGGTGATCATGTCCGCCGGCGGCGTCGACGTCTCCTTCGCC CAGGACAACCCCAAGATCGGCGCCGTCGTCTGGGCCGGCTACCCCGGCGAGGAAGGCGGC ACGGCCATCGCCGACGTGCTCTTCGGAAAATACAATCCAGGAGGAAGATTGCCGCTGACG TGGTACAAGAACGAGTACGTGAGCAAGATCCCGATGACGTCCATGGCGCTGCGGCCGGAC GCCGAGCACGGCTACCCCGGCCGGACCTACAAGTTCTACGGCGGCGCCGACGTGCTCTAC CCGTTCGGCCACGGCCTCAGCTACACCAACTTCACCTACGCGTCGGCCACCGCCGCCGCC CCGGTCACGGTCAAGGTCGGCGCGTGGGAGTACTGCAAGCAGCTCACCTACAAGGCCGGG GTGTCCTCGCCGCCGGCGTGCCCGGCCGTGAACGTGGCCAGCCACGCGTGCCAGGAGGAG GTCAGCTTCGCCGTCACGGTGGCCAACACGGGCGGCAGGGACGGCACCCACGTCGTGCCG ATGTACACGGCGCCGCCGGCGGAGGTGGACGGCGCGCCGCGGAAGCAGCTGGTGGCGTTC CGGCGGGTGCGGGTGGCCGCGGGCGCCGCCGTCGAGGTGGCCTTCGCGCTCAACGTGTGC AAGGCGTTCGCGATCGTCGAGGAGACGGCGTACACCGTCGTGCCGTCGGGAGTCAGCAGG GTCCTCGTCGGAGACGACGCGCTGTCGCTGTCCTTCCCTGTTCAGATCGACCTGCAGGCG GCAGCATAGCAGCATAGGTTCTCTGCAATTCTTGGAGTTCGTTGGATTCTTTTGCTGGGG TGGTAAAAGGTAAAAAAAAAATCGAAGCAAGTGTAATTAGTTTACACCACGCTATAGATG AAACTTTTACAAAGCACATTGCATCATTGGGAATTAATTGGAACAGGAATTTTCATTTTT AGTTTTGCTCAATGTATTACTGTGATGGCATGTTATTCAGCAATGTTACACTTTTTTTTT CAATAATGGAAATCAATCATTAGCAGTGTT