Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0293100-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:10664792:10666903:-1 gene:Os01g0293100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TDR INTERACTING PROTEIN2, basic helix-loop-helix protein 142 description:bHLH transcription factor, Control of anther cell differentiation, Pollen development (Os01t0293100-01)
Sequence	ATGTATCACCCGCAGTGCGAGCTCCTGATGCCGCTTGAGAGCCTGGAGATGGACGTCGGC CAGTCGCACCTCGCCGCCGCCGTCGCAGCAGCCATGCCGGGGGAGCTCAACTTCCACCTC CTCCACTCGCTCGACGCCGCCGCGGCGGCTGCCTCCTCCACCGCCGCCTCGGCCTCCTCC CAGCCCACCGTCGACTACTTCTTCGGCGGCGCCGACCAGCAGCCGCCGCCGCCGGCGGCG ATGCAGTACGACCAGCTGGCGGCGCCGCACCACCACCAGACGGTGGCCATGCTGCGCGAC TACTACGGCGGCCACTACCCGCCGGCGGCGGCGGCGGCGGCGGCCACCGAGGCGTACTTC CGCGGCGGGCCAAGGACGGCCGGGTCGTCGTCGCTCGTGTTCGGCCCGGCCGACGACGAG TCGGCCTTCATGGTCGGACCCTTCGAGAGCTCCCCGACGCCGCGGTCCGGCGGCGGCAGG AAGCGTAGCCGCGCCACCGCCGGCTTCCACGGCGGCGGGCCGGCCAACGGCGTCGAGAAG AAGGAGAAGCAGCGCCGCCTGCGGCTCACCGAGAAGTACAACGCCCTCATGCTCCTCATC CCCAACCGCACCAAGGAGGATAGAGCGACGGTGATCTCAGACGCGATCGAGTACATCCAG GAGCTAGGGAGGACGGTGGAGGAGCTGACGCTGCTGGTGGAGAAGAAGCGGCGGCGGAGG GAGATGCAGGGGGACGTGGTGGACGCGGCGACGTCGTCGGTGGTGGCGGGGATGGATCAG GCGGCGGAGAGCTCGGAGGGCGAGGTGATGGCGGCGGCGGCGATGGGCGCGGTGGCACCG CCGCCGCGGCAGGCGCCGATCCGGAGCACGTACATCCAGCGGCGGAGCAAGGAGACGTTC GTGGACGTGCGGATCGTGGAGGACGACGTGAACATCAAGCTCACCAAGCGCCGCCGCGAC GGCTGTCTCGCCGCCGCGTCGCGCGCGCTGGACGACCTCCGCCTCGACCTCGTCCACCTC TCCGGCGGCAAGATCGGCGACTGCCACATCTACATGTTCAACACCAAGATTCATTCGGGA TCTCCAGTGTTTGCAAGTGCAGTGGCCAGCAGGCTGATTGAAGTGGTGGATGAGTACTAA

Peptide Sequence

PEP ID	Os01t0293100-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:10664792:10666903:-1 gene:Os01g0293100 transcript:Os01t0293100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TDR INTERACTING PROTEIN2, basic helix-loop-helix protein 142 description:bHLH transcription factor, Control of anther cell differentiation, Pollen development (Os01t0293100-01)
Sequence	MYHPQCELLMPLESLEMDVGQSHLAAAVAAAMPGELNFHLLHSLDAAAAAASSTAASASS QPTVDYFFGGADQQPPPPAAMQYDQLAAPHHHQTVAMLRDYYGGHYPPAAAAAAATEAYF RGGPRTAGSSSLVFGPADDESAFMVGPFESSPTPRSGGGRKRSRATAGFHGGGPANGVEK KEKQRRLRLTEKYNALMLLIPNRTKEDRATVISDAIEYIQELGRTVEELTLLVEKKRRRR EMQGDVVDAATSSVVAGMDQAAESSEGEVMAAAAMGAVAPPPRQAPIRSTYIQRRSKETF VDVRIVEDDVNIKLTKRRRDGCLAAASRALDDLRLDLVHLSGGKIGDCHIYMFNTKIHSG SPVFASAVASRLIEVVDEY

Transcript Sequence

Transcript ID	Os01t0293100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:10664792:10666903:-1 gene:Os01g0293100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TDR INTERACTING PROTEIN2, basic helix-loop-helix protein 142 description:bHLH transcription factor, Control of anther cell differentiation, Pollen development (Os01t0293100-01)
Sequence	AAGAAACCAACTGCTTTCTCCTACCCAATATCACCCTTGCCCCTTTTATATACTCTTCCT CTCATCACCTTCTCGATCGGCCTCTCTCCTCTCCTCTCATCAGCTCACACCCCCAACCAA CAAACCTAGTTAATTTAGCTCTAGTTGGTTCATCCCTGCTGCACTGCGAGCTCAAGTAAT CGATCTGAGCTCTGAAGAAAAAGGTGGTAGAGTGCGAGGAAGATGTATCACCCGCAGTGC GAGCTCCTGATGCCGCTTGAGAGCCTGGAGATGGACGTCGGCCAGTCGCACCTCGCCGCC GCCGTCGCAGCAGCCATGCCGGGGGAGCTCAACTTCCACCTCCTCCACTCGCTCGACGCC GCCGCGGCGGCTGCCTCCTCCACCGCCGCCTCGGCCTCCTCCCAGCCCACCGTCGACTAC TTCTTCGGCGGCGCCGACCAGCAGCCGCCGCCGCCGGCGGCGATGCAGTACGACCAGCTG GCGGCGCCGCACCACCACCAGACGGTGGCCATGCTGCGCGACTACTACGGCGGCCACTAC CCGCCGGCGGCGGCGGCGGCGGCGGCCACCGAGGCGTACTTCCGCGGCGGGCCAAGGACG GCCGGGTCGTCGTCGCTCGTGTTCGGCCCGGCCGACGACGAGTCGGCCTTCATGGTCGGA CCCTTCGAGAGCTCCCCGACGCCGCGGTCCGGCGGCGGCAGGAAGCGTAGCCGCGCCACC GCCGGCTTCCACGGCGGCGGGCCGGCCAACGGCGTCGAGAAGAAGGAGAAGCAGCGCCGC CTGCGGCTCACCGAGAAGTACAACGCCCTCATGCTCCTCATCCCCAACCGCACCAAGGAG GATAGAGCGACGGTGATCTCAGACGCGATCGAGTACATCCAGGAGCTAGGGAGGACGGTG GAGGAGCTGACGCTGCTGGTGGAGAAGAAGCGGCGGCGGAGGGAGATGCAGGGGGACGTG GTGGACGCGGCGACGTCGTCGGTGGTGGCGGGGATGGATCAGGCGGCGGAGAGCTCGGAG GGCGAGGTGATGGCGGCGGCGGCGATGGGCGCGGTGGCACCGCCGCCGCGGCAGGCGCCG ATCCGGAGCACGTACATCCAGCGGCGGAGCAAGGAGACGTTCGTGGACGTGCGGATCGTG GAGGACGACGTGAACATCAAGCTCACCAAGCGCCGCCGCGACGGCTGTCTCGCCGCCGCG TCGCGCGCGCTGGACGACCTCCGCCTCGACCTCGTCCACCTCTCCGGCGGCAAGATCGGC GACTGCCACATCTACATGTTCAACACCAAGATTCATTCGGGATCTCCAGTGTTTGCAAGT GCAGTGGCCAGCAGGCTGATTGAAGTGGTGGATGAGTACTAACTAGCTCGAGCTAGCTAA TTAGCCGACCGACCGATCGATATGATGAAAGTTTCTATGTTGCTAGCTAGCTAGGGTTCT TGGATGCATGAGTACTGAGTAGCTCTTTAATTAATTTCCTTTTAATTTTAGACTGTTTAA TTTGGATTGGTAAAGACTCGTGTTAGCTTTTGGGAGATCTTTGGTATGTCATGGTTTGCA TGTATTATTTTGGTCTACTTGGATAAATAATTGATGCTCTTTGAGACGTTAATTAAT