Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0292900-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:10650742:10656755:1 gene:Os01g0292900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE SQUAMOSA PROMOTER-BINDING-LIKE 1 description:Similar to Squamosa-promoter binding-like protein 2. (Os01t0292900-01);Similar to Squamosa-promoter binding-like protein 2. (Os01t0292900-02)
Sequence	ATGTCGAGTGGGCTCAAGAAGAAGGGCCTGGAGTGGGATTTGAACGATTGGAGATGGGAT TCAAACCTGTTCTTGGCCACACCATCCAACGCTTCTCCATCCAAGTGCAGCAGGAGGGAA TTGGGCCGAGCCGAGGGGGAGATCGATTTTGGTGTGGTTGATAAGAGGAGAAGAGTCTCA CCAGAGGACGATGACGGCGAGGAGTGCATCAATGCAGCAACCACGAATGGGGACGATGGC CAGATTTCTGGTCAGAGAGGAAGGAGCAGTGAGGACGAGATGCCTAGGCAAGGCACCTGT TCTAGTAGCGGTCCGTGTTGCCAAGTCGACGGCTGCACGGTCAATCTCAGCAGTGCCAGG GATTACAACAAGAGGCATAAGGTCTGTGAGGTGCATACCAAGTCGGGAGTGGTTCGTATA AAAAACGTAGAACACCGGTTCTGTCAACAGTGCAGCAGGTTTCACTTTCTTCAAGAATTT GATGAAGGAAAGAAGAGCTGTCGCTCACGGCTAGCACAACATAACAGAAGGAGGAGGAAA GTACAAGTGCAGGCTGGTGTAGATGTGAATTCCTTGCATGAAAATCATTCTTTGAGCAAC ACATTACTCCTGTTGTTGAAACAACTTTCTGGCCTAGATTCTAGTGGTCCATCTGAGCAA ATCAATGGTCCTAACTATTTGACCAATCTTGTGAAGAATCTTGCTGCTCTTGCTGGTACA CAAAGAAATCAAGATATGCTAAAGAATGCAAATTCTGCTGCAATAGCATCACATACTGGT AATTATGTTGCAAAAGGCAATAGTCTACATGACTCAAGACCACATATTCCTGTAGGCACT GAATCCACTGCAGAAGAACCTACAGTGGAAAGGCGTGTGCAAAATTTTGATTTAAATGAT GCTTATGTGGAAGGAGATGAGAATCGAACAGATAAAATTGTGTTTAAACTCTTCGGGAAA GAGCCAAATGATTTTCCTTCTGATTTACGTGCTCAGATCCTCAGCTGGTTGTCGAATTGC CCAAGTGATATAGAGAGCTATATCAGGCCTGGCTGTATCATCCTAACTATTTACATGCGC CTCCCTAATTGGATGTGGGATAAGCTTGCTGCCGACCCAGCTCACTGGATACAGAAGCTA ATTAGCTTGTCCACTGATACCTTGTGGAGAACAGGATGGATGTATGCAAGGGTGCAGGAC TACCTGACATTGAGTTGCAACGGTAATCTTATGTTAGCGTCTCCCTGGCAGCCTGCAATA GGCAACAAGCATCAGATATTGTTTATAACCCCTATTGCAGTTGCTTGTTCTTCAACAGCA AACTTCTCAGTGAAAGGTCTCAACATAGCTCAACCAACCACAAAATTACTTTGCATTTTT GGTGGGAAGTATCTAATCCAAGAAGCAACAGAAAAGCTACTTGATGATACTAAAATGCAG CGAGGCCCTCAGTGTCTGACCTTCTCTTGCTCCTTTCCTAGTACTAGTGGAAGAGGATTC ATAGAGGTTGAAGATCTTGATCAAAGCAGCCTTTCATTTCCCTTTGTTGTTGCTGAAGAA GATGTATGTTCTGAAATTCGAACACTGGAACATTTACTGAATCTGGTTTCATTTGATGAC ACCTTGGTAGAGAAAAACGATTTGTTGGCTTCTCGAGATCGAGCCTTAAATTTTTTACAC GAATTTGGTTGGTTTCTTCAAAGGAGCCACATACGAGCTACATCTGAGACTCCAAAAGAT TGTACTGAGGGCTTTCCTGCTGCAAGATTTAGATGGTTGCTGTCCTTTGCAGTTGATCGG GAATTTTGTGCTGTTATAAAGAAGCTTCTGGACACCTTGTTTCAGGGTGGTGTTGATCTG GATGTCCAATCAACAGTTGAATTTGTCCTGAAACAAGATTTAGTATTTGTGGCTGTCAAC AAACGGTCGAAGCCTTTAATTGACTTTCTGTTGACATACACAACATCTTCTGCTCCAATG GACGGAACTGAAAGTGCTGCTCCAGCTCAGTTCTTGTTTACACCTGACATAGCTGGTCCA TCAGATATTACACCTCTTCATATTGCAGCCACATACAGTGATACTGCTGGTGTTTTAGAT GCTTTAACTGATGATCCTCAGCAGCTGGGAATCAAAGCATGGAAGAATGCTCGCGATGCT ACTGGATTGACTCCGGAGGATTACGCTCGGAAGAGAGGCCACGAATCCTACATCGAGATG GTCCAGAACAAGATTGACAGCAGGTTACCCAAAGCTCATGTGTCTGTCACCATATCCAGC ACCACATCCACCACCGACTTCACCGAAAAGCACGCGAGCCAATCGAAGACTACAGATCAA ACCGCATTTGATGTGGAGAAGGGCCAACAGATCAGCACAAAGCCACCACTGAGCTGCAGG CAGTGTCTCCCAGAACTCGCTTACCGGCATCATTTGAACAGGTTTCTGTCAACCAGGCCA GCAGTACTCTCCTTGGTCGCCATTGCTGCTGTCTGTGTCTGTGTAGGGTTGATCATGCAG GGGCCACCCCACATTGGAGGTATGAGAGGTCCTTTCCGCTGGAATTCTTTGCGTTCAGGC CCCAAGTGA

Peptide Sequence

PEP ID	Os01t0292900-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:10650742:10656755:1 gene:Os01g0292900 transcript:Os01t0292900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE SQUAMOSA PROMOTER-BINDING-LIKE 1 description:Similar to Squamosa-promoter binding-like protein 2. (Os01t0292900-01);Similar to Squamosa-promoter binding-like protein 2. (Os01t0292900-02)
Sequence	MSSGLKKKGLEWDLNDWRWDSNLFLATPSNASPSKCSRRELGRAEGEIDFGVVDKRRRVS PEDDDGEECINAATTNGDDGQISGQRGRSSEDEMPRQGTCSSSGPCCQVDGCTVNLSSAR DYNKRHKVCEVHTKSGVVRIKNVEHRFCQQCSRFHFLQEFDEGKKSCRSRLAQHNRRRRK VQVQAGVDVNSLHENHSLSNTLLLLLKQLSGLDSSGPSEQINGPNYLTNLVKNLAALAGT QRNQDMLKNANSAAIASHTGNYVAKGNSLHDSRPHIPVGTESTAEEPTVERRVQNFDLND AYVEGDENRTDKIVFKLFGKEPNDFPSDLRAQILSWLSNCPSDIESYIRPGCIILTIYMR LPNWMWDKLAADPAHWIQKLISLSTDTLWRTGWMYARVQDYLTLSCNGNLMLASPWQPAI GNKHQILFITPIAVACSSTANFSVKGLNIAQPTTKLLCIFGGKYLIQEATEKLLDDTKMQ RGPQCLTFSCSFPSTSGRGFIEVEDLDQSSLSFPFVVAEEDVCSEIRTLEHLLNLVSFDD TLVEKNDLLASRDRALNFLHEFGWFLQRSHIRATSETPKDCTEGFPAARFRWLLSFAVDR EFCAVIKKLLDTLFQGGVDLDVQSTVEFVLKQDLVFVAVNKRSKPLIDFLLTYTTSSAPM DGTESAAPAQFLFTPDIAGPSDITPLHIAATYSDTAGVLDALTDDPQQLGIKAWKNARDA TGLTPEDYARKRGHESYIEMVQNKIDSRLPKAHVSVTISSTTSTTDFTEKHASQSKTTDQ TAFDVEKGQQISTKPPLSCRQCLPELAYRHHLNRFLSTRPAVLSLVAIAAVCVCVGLIMQ GPPHIGGMRGPFRWNSLRSGPK

Transcript Sequence

Transcript ID	Os01t0292900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:10650742:10656755:1 gene:Os01g0292900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE SQUAMOSA PROMOTER-BINDING-LIKE 1 description:Similar to Squamosa-promoter binding-like protein 2. (Os01t0292900-01);Similar to Squamosa-promoter binding-like protein 2. (Os01t0292900-02)
Sequence	ATGCAACGGATTCTTTGGTTCTTGATTTCCTTTTTCTTTTTTCTGACCATTTCAGGATTT GTCCCAAGTTATCTTTTTTTTCCCTTTTTTCCCTTCTTCTGGTCATTTCAGGATTGGTTC CAAGCTGTTGATTTTCTTCTCTCTTTTTTTTTTGTCATTTCAGGGATTGATTGCAAGATC AAGATAGGCTGCACAGTGGCGTGTGTGATTAATCATGTGTGCCTGATGCACTTGTAGCTG GGGATGCAGGTGAATCTGAGGCCGTTACTGTACCAAGAACAGGAGGTTCAATAGAGGGGA AGAGATTCTTGACGAAGCACACAAAGGGAGGATCCTAAATTGATGTAGCAGGAATGTCGA GTGGGCTCAAGAAGAAGGGCCTGGAGTGGGATTTGAACGATTGGAGATGGGATTCAAACC TGTTCTTGGCCACACCATCCAACGCTTCTCCATCCAAGTGCAGCAGGAGGGAATTGGGCC GAGCCGAGGGGGAGATCGATTTTGGTGTGGTTGATAAGAGGAGAAGAGTCTCACCAGAGG ACGATGACGGCGAGGAGTGCATCAATGCAGCAACCACGAATGGGGACGATGGCCAGATTT CTGGTCAGAGAGGAAGGAGCAGTGAGGACGAGATGCCTAGGCAAGGCACCTGTTCTAGTA GCGGTCCGTGTTGCCAAGTCGACGGCTGCACGGTCAATCTCAGCAGTGCCAGGGATTACA ACAAGAGGCATAAGGTCTGTGAGGTGCATACCAAGTCGGGAGTGGTTCGTATAAAAAACG TAGAACACCGGTTCTGTCAACAGTGCAGCAGGTTTCACTTTCTTCAAGAATTTGATGAAG GAAAGAAGAGCTGTCGCTCACGGCTAGCACAACATAACAGAAGGAGGAGGAAAGTACAAG TGCAGGCTGGTGTAGATGTGAATTCCTTGCATGAAAATCATTCTTTGAGCAACACATTAC TCCTGTTGTTGAAACAACTTTCTGGCCTAGATTCTAGTGGTCCATCTGAGCAAATCAATG GTCCTAACTATTTGACCAATCTTGTGAAGAATCTTGCTGCTCTTGCTGGTACACAAAGAA ATCAAGATATGCTAAAGAATGCAAATTCTGCTGCAATAGCATCACATACTGGTAATTATG TTGCAAAAGGCAATAGTCTACATGACTCAAGACCACATATTCCTGTAGGCACTGAATCCA CTGCAGAAGAACCTACAGTGGAAAGGCGTGTGCAAAATTTTGATTTAAATGATGCTTATG TGGAAGGAGATGAGAATCGAACAGATAAAATTGTGTTTAAACTCTTCGGGAAAGAGCCAA ATGATTTTCCTTCTGATTTACGTGCTCAGATCCTCAGCTGGTTGTCGAATTGCCCAAGTG ATATAGAGAGCTATATCAGGCCTGGCTGTATCATCCTAACTATTTACATGCGCCTCCCTA ATTGGATGTGGGATAAGCTTGCTGCCGACCCAGCTCACTGGATACAGAAGCTAATTAGCT TGTCCACTGATACCTTGTGGAGAACAGGATGGATGTATGCAAGGGTGCAGGACTACCTGA CATTGAGTTGCAACGGTAATCTTATGTTAGCGTCTCCCTGGCAGCCTGCAATAGGCAACA AGCATCAGATATTGTTTATAACCCCTATTGCAGTTGCTTGTTCTTCAACAGCAAACTTCT CAGTGAAAGGTCTCAACATAGCTCAACCAACCACAAAATTACTTTGCATTTTTGGTGGGA AGTATCTAATCCAAGAAGCAACAGAAAAGCTACTTGATGATACTAAAATGCAGCGAGGCC CTCAGTGTCTGACCTTCTCTTGCTCCTTTCCTAGTACTAGTGGAAGAGGATTCATAGAGG TTGAAGATCTTGATCAAAGCAGCCTTTCATTTCCCTTTGTTGTTGCTGAAGAAGATGTAT GTTCTGAAATTCGAACACTGGAACATTTACTGAATCTGGTTTCATTTGATGACACCTTGG TAGAGAAAAACGATTTGTTGGCTTCTCGAGATCGAGCCTTAAATTTTTTACACGAATTTG GTTGGTTTCTTCAAAGGAGCCACATACGAGCTACATCTGAGACTCCAAAAGATTGTACTG AGGGCTTTCCTGCTGCAAGATTTAGATGGTTGCTGTCCTTTGCAGTTGATCGGGAATTTT GTGCTGTTATAAAGAAGCTTCTGGACACCTTGTTTCAGGGTGGTGTTGATCTGGATGTCC AATCAACAGTTGAATTTGTCCTGAAACAAGATTTAGTATTTGTGGCTGTCAACAAACGGT CGAAGCCTTTAATTGACTTTCTGTTGACATACACAACATCTTCTGCTCCAATGGACGGAA CTGAAAGTGCTGCTCCAGCTCAGTTCTTGTTTACACCTGACATAGCTGGTCCATCAGATA TTACACCTCTTCATATTGCAGCCACATACAGTGATACTGCTGGTGTTTTAGATGCTTTAA CTGATGATCCTCAGCAGCTGGGAATCAAAGCATGGAAGAATGCTCGCGATGCTACTGGAT TGACTCCGGAGGATTACGCTCGGAAGAGAGGCCACGAATCCTACATCGAGATGGTCCAGA ACAAGATTGACAGCAGGTTACCCAAAGCTCATGTGTCTGTCACCATATCCAGCACCACAT CCACCACCGACTTCACCGAAAAGCACGCGAGCCAATCGAAGACTACAGATCAAACCGCAT TTGATGTGGAGAAGGGCCAACAGATCAGCACAAAGCCACCACTGAGCTGCAGGCAGTGTC TCCCAGAACTCGCTTACCGGCATCATTTGAACAGGTTTCTGTCAACCAGGCCAGCAGTAC TCTCCTTGGTCGCCATTGCTGCTGTCTGTGTCTGTGTAGGGTTGATCATGCAGGGGCCAC CCCACATTGGAGGTATGAGAGGTCCTTTCCGCTGGAATTCTTTGCGTTCAGGCCCCAAGT GATATGGTAGATTGACTGCCAAGCATCTGCAAATACAGTTCAGCTGTATCATGCAGCATG GAGATGTTTTGCTTCGAGTCTGTATATTCTTGTAACATAGATTTATCTTTTCACGGAATA ACTATATTTGTTTACTACTTTACTGTACAACATTTAGAATTCGAAACTTGCATATCTAGA AATTCCATTGGACAGGCATCCTGACCTTGATAGAATGCAGTACTATCTGAATGGTTTTAC CGTGAGCAGAGCAGCTGACAGAGTGACAGTGCTTCCATGCTCTTTAATAATACTCCATCC GTCTC