Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0290100-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:10496869:10500943:-1 gene:Os01g0290100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal phosphate-dependent transferase, major region, subdomain 1 domain containing protein. (Os01t0290100-01)
Sequence	ATGGCGTCGATCCCGCCGGATGACGACGCGGCGGCGGCGGCGGCGGCGGGGGCGGCCGAG AACGGGTACGGGAACGGGAAGGGGAACGGCAACGGGCCGGCGCCGCGCCCGCCGCCGGCG AAGCGGCCGAGGTCGGTGATCTCGGCGGCGCAGATCCGGGCGGAGTTCGAGCACCACGAG GCCGGGGTGGCGCGCGTCAACAACGGCAGCTTCGGGTGCTGCCCGTCCTCCCTCCTCGAC GCGCAGGCGCGGTGGCAGCGCCTCTTCATCGCCCAGCCCGACGACTTCTACTTCCACGCC CTCCAGCCGGGGCTCCGCCGCTCGCGGGCTGCCGTCGCGGGCCTCGTCAACGCCGGGGAC GTCGCCGAGGTCTCCCTCGTCGACAACGCCACCACCGCCGCCGCCATCGTGCTGCAGCAC GCCGCGTGGAGCTTCGCCGAGGGGAGGTTCTCCCGCGGGGACGCCGTGCTCATGCTCCAC TACGCGTACGGCGCCGTCAAGAAGTCCATCCACGCCTACGTCGCCCGCGCCGGGGCCACC GTCGTCGAGGTGCCGCTCCCGTTCCCCGTCGCGTCCGCGGACGCCATCATCGCCGAGTTC CGCGCCGCGCTCGATGTGGCCAAGGCCGGGGGGCGCAAGGTCCGCCTCGCGGTCATCGAC CACATCACCTCCATGCCTAGCGTTGTCATCCCGGTGAAGGAGCTCGTTGCCATCTGCCGA GAAGAGGGTGTCGATAAGGTGTTTATAGATGCCGCGCACTCCATTGGGCAGGTCCCTGTT GATGTGCGCGATATTGGGGCCGATTTTTACACCAGCAATCTCCACAAGTGGTTCTTCTGC CCGCCTGCCGTGGCTTTCTTGCACACCCGAAAGGATGATCCGATAGCCTCCCAGCTCCAC CATCCTGTGGTGTCGCACGAGTACGGCAATGGGCTTCCCATGGAGAGTGGATGGATTGGG ACAAGGGATTACAGTGCACAGCTTGTAGTGCCTGAATCTATTGATTTTGTTAACCGATTT GAAGGTGGCATCGAGGGAATAAGGAGCCGTAACCATGAAAAAGTGATCGAGATGGGTAAG ATGCTTGCTGAGGCATGGGGGACTTTTCTTGGCACACCACCAGAGCTGTGCGGTAGCATG GTTATGGTTGGTCTTCCCGGTTGCCTTGGTGTTGAAAGTGATGATGATGTGATGAGAATG AGAACAATGTTGAGGAAGGATTTTATGGTGGAGGTGCCAATATACTACAATTCGAGAAGA GTAGAAGCTCAAGAAATGGCAAAGGATAAGAATGGTGATGCAGTCACAGGGTATGTTAGG ATCTCACACCAAGTTTACAATGTAACGGAGGATTATGAGAAGCTGAGGGATGCTGTCAAT AAGCTTGTTGCTGATGGATTCACCAGCAGCAAGTTGCGGCCTTCGCAGAAGCAGGAAACG ATGGCCTGA

Peptide Sequence

PEP ID	Os01t0290100-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:10496869:10500943:-1 gene:Os01g0290100 transcript:Os01t0290100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal phosphate-dependent transferase, major region, subdomain 1 domain containing protein. (Os01t0290100-01)
Sequence	MASIPPDDDAAAAAAAGAAENGYGNGKGNGNGPAPRPPPAKRPRSVISAAQIRAEFEHHE AGVARVNNGSFGCCPSSLLDAQARWQRLFIAQPDDFYFHALQPGLRRSRAAVAGLVNAGD VAEVSLVDNATTAAAIVLQHAAWSFAEGRFSRGDAVLMLHYAYGAVKKSIHAYVARAGAT VVEVPLPFPVASADAIIAEFRAALDVAKAGGRKVRLAVIDHITSMPSVVIPVKELVAICR EEGVDKVFIDAAHSIGQVPVDVRDIGADFYTSNLHKWFFCPPAVAFLHTRKDDPIASQLH HPVVSHEYGNGLPMESGWIGTRDYSAQLVVPESIDFVNRFEGGIEGIRSRNHEKVIEMGK MLAEAWGTFLGTPPELCGSMVMVGLPGCLGVESDDDVMRMRTMLRKDFMVEVPIYYNSRR VEAQEMAKDKNGDAVTGYVRISHQVYNVTEDYEKLRDAVNKLVADGFTSSKLRPSQKQET MA

Transcript Sequence

Transcript ID	Os01t0290100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:10496869:10500943:-1 gene:Os01g0290100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal phosphate-dependent transferase, major region, subdomain 1 domain containing protein. (Os01t0290100-01)
Sequence	AGCCCCAGTCACTGCCCAGGCGGGCCCACCCCCGTCCACGTAAGCAGCAGCGCCGGAACC ACACGTTAAAACAACAAGCGCGCCCGCGCGCGGCGGAGGTGAGAGCGACCGGCCCGACCG AGACCGGTCCGGTCCTCGCCTCGGCCGGCGCGGTTCGAACTCGAACTCGACACGGCTCGC GACGCGAGAAGCCCCCATTCCCAATCCGCAAATTCACTTCTCTCCTCTCCCCAAATCTCC ACCTCCACCACCTCTCCAATCCAATCCAACCAAACCAACCAACCAACCCTAACGCGGCGG CGCGGCGAGCGATGGCGTCGATCCCGCCGGATGACGACGCGGCGGCGGCGGCGGCGGCGG GGGCGGCCGAGAACGGGTACGGGAACGGGAAGGGGAACGGCAACGGGCCGGCGCCGCGCC CGCCGCCGGCGAAGCGGCCGAGGTCGGTGATCTCGGCGGCGCAGATCCGGGCGGAGTTCG AGCACCACGAGGCCGGGGTGGCGCGCGTCAACAACGGCAGCTTCGGGTGCTGCCCGTCCT CCCTCCTCGACGCGCAGGCGCGGTGGCAGCGCCTCTTCATCGCCCAGCCCGACGACTTCT ACTTCCACGCCCTCCAGCCGGGGCTCCGCCGCTCGCGGGCTGCCGTCGCGGGCCTCGTCA ACGCCGGGGACGTCGCCGAGGTCTCCCTCGTCGACAACGCCACCACCGCCGCCGCCATCG TGCTGCAGCACGCCGCGTGGAGCTTCGCCGAGGGGAGGTTCTCCCGCGGGGACGCCGTGC TCATGCTCCACTACGCGTACGGCGCCGTCAAGAAGTCCATCCACGCCTACGTCGCCCGCG CCGGGGCCACCGTCGTCGAGGTGCCGCTCCCGTTCCCCGTCGCGTCCGCGGACGCCATCA TCGCCGAGTTCCGCGCCGCGCTCGATGTGGCCAAGGCCGGGGGGCGCAAGGTCCGCCTCG CGGTCATCGACCACATCACCTCCATGCCTAGCGTTGTCATCCCGGTGAAGGAGCTCGTTG CCATCTGCCGAGAAGAGGGTGTCGATAAGGTGTTTATAGATGCCGCGCACTCCATTGGGC AGGTCCCTGTTGATGTGCGCGATATTGGGGCCGATTTTTACACCAGCAATCTCCACAAGT GGTTCTTCTGCCCGCCTGCCGTGGCTTTCTTGCACACCCGAAAGGATGATCCGATAGCCT CCCAGCTCCACCATCCTGTGGTGTCGCACGAGTACGGCAATGGGCTTCCCATGGAGAGTG GATGGATTGGGACAAGGGATTACAGTGCACAGCTTGTAGTGCCTGAATCTATTGATTTTG TTAACCGATTTGAAGGTGGCATCGAGGGAATAAGGAGCCGTAACCATGAAAAAGTGATCG AGATGGGTAAGATGCTTGCTGAGGCATGGGGGACTTTTCTTGGCACACCACCAGAGCTGT GCGGTAGCATGGTTATGGTTGGTCTTCCCGGTTGCCTTGGTGTTGAAAGTGATGATGATG TGATGAGAATGAGAACAATGTTGAGGAAGGATTTTATGGTGGAGGTGCCAATATACTACA ATTCGAGAAGAGTAGAAGCTCAAGAAATGGCAAAGGATAAGAATGGTGATGCAGTCACAG GGTATGTTAGGATCTCACACCAAGTTTACAATGTAACGGAGGATTATGAGAAGCTGAGGG ATGCTGTCAATAAGCTTGTTGCTGATGGATTCACCAGCAGCAAGTTGCGGCCTTCGCAGA AGCAGGAAACGATGGCCTGATGAACATTGCAGCCAACCAGCACTCTGTTGGAAGTTATGT TGTGGCCGACTACTTAGATGTGGATCGCCGTGACAGCCAGCGCTGCGGTGTGATCTAGAT TTAGCCCGCCAATGGCGTTGCCAGTTCATGTAGTGTACTTTCAGAAACTGACAGAAGTGT TGTATTTGCAATCCGTCCGTCACAATAATGCACTGGCATGTCTTCCCCCTTACCCTCATT TTCAAGCTGTAATGTAAGAACAACAATAATCTGAATCCAAGGAGAATTGCCGCCGCTGTA GATTGAATTG