Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0290000-04
CDS Infomation	cds chromosome:IRGSP-1.0:1:10492062:10493925:-1 gene:Os01g0290000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cyprosin precursor (EC 3.4.23.-) (Fragment). (Os01t0290000-01);Similar to Cyprosin precursor (EC 3.4.23.-) (Fragment). (Os01t0290000-02);Similar to Cyprosin precursor (EC 3.4.23.-) (Fragment). (Os01t0290000-03);Similar to retrotransposon protein SINE subclass. (Os01t0290000-04)
Sequence	TACAAGGGGAGCCATACATATGTTCCTGTTACCCGCAAAGGCTACTGGCAGTTTGAGATG GGGGATCTTCTTATTGATGACTACTCAACTGGGTTCTGTTCTGGTGGTTGCGCCGCTATT GCGGATTCAGGGACTTCATTGCTCGGTGGCCCAACAACTATTGTTGCTCAAATTAATCAC GCAATTGGAGCTGAGGGAATTGTTAGTATGGAATGCAAACAAGTTGTGCGGGACTACGGG GACATGATCCTCGAGATGCTCATAGCACAGGCAAGCCCCATGAAACTGTGCTCTCAGATT GGTCTCTGTGCATTTGATGGTACTCGTTCTGTCAGAAACAATATAGAGTCTGTTGTTGAT AAAGAAAAGGTGGGCTCAGATCTTTCCTGCACTGCTTGCGAGATGGCTGTTGTCTGGATA CAGAATCAGCTCCGACATAACCAAACAAGGGAGCTCATTTTGCAATATGCTGACCAGCTC TGCGAGCGTCTCCCAAGCCCCAATGGCGAATCGGCAGTCGACTGCGATGAGATCTCAAAC ATGCCGAACCTTTCATTCACCATAGCAAACAAGACCTTCACCTTGACACCAGAGCAGTAC GTAGTGAAGCTGGAGCAGCAAGGTCAAACTGTTTGCATCAGCGGGTTCATGGCGTTCGAC GTGCCACCTCCACGCGGCCCACTCTGGATTCTTGGAGACGTGTTCATGGCTGCATACCAC ACTGTCTTCGACTTTGGCAAAAACAGGATTGGGTTCGCCGAGTCTGCTTGA

Peptide Sequence

PEP ID	Os01t0290000-04
PEP Infomation	pep chromosome:IRGSP-1.0:1:10492062:10493925:-1 gene:Os01g0290000 transcript:Os01t0290000-04 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cyprosin precursor (EC 3.4.23.-) (Fragment). (Os01t0290000-01);Similar to Cyprosin precursor (EC 3.4.23.-) (Fragment). (Os01t0290000-02);Similar to Cyprosin precursor (EC 3.4.23.-) (Fragment). (Os01t0290000-03);Similar to retrotransposon protein SINE subclass. (Os01t0290000-04)
Sequence	YKGSHTYVPVTRKGYWQFEMGDLLIDDYSTGFCSGGCAAIADSGTSLLGGPTTIVAQINH AIGAEGIVSMECKQVVRDYGDMILEMLIAQASPMKLCSQIGLCAFDGTRSVRNNIESVVD KEKVGSDLSCTACEMAVVWIQNQLRHNQTRELILQYADQLCERLPSPNGESAVDCDEISN MPNLSFTIANKTFTLTPEQYVVKLEQQGQTVCISGFMAFDVPPPRGPLWILGDVFMAAYH TVFDFGKNRIGFAESA

Transcript Sequence

Transcript ID	Os01t0290000-04
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:10492062:10493925:-1 gene:Os01g0290000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cyprosin precursor (EC 3.4.23.-) (Fragment). (Os01t0290000-01);Similar to Cyprosin precursor (EC 3.4.23.-) (Fragment). (Os01t0290000-02);Similar to Cyprosin precursor (EC 3.4.23.-) (Fragment). (Os01t0290000-03);Similar to retrotransposon protein SINE subclass. (Os01t0290000-04)
Sequence	TACAAGGGGAGCCATACATATGTTCCTGTTACCCGCAAAGGCTACTGGCAGTTTGAGATG GGGGATCTTCTTATTGATGACTACTCAACTGGGTTCTGTTCTGGTGGTTGCGCCGCTATT GCGGATTCAGGGACTTCATTGCTCGGTGGCCCAACAACTATTGTTGCTCAAATTAATCAC GCAATTGGAGCTGAGGGAATTGTTAGTATGGAATGCAAACAAGTTGTGCGGGACTACGGG GACATGATCCTCGAGATGCTCATAGCACAGGCAAGCCCCATGAAACTGTGCTCTCAGATT GGTCTCTGTGCATTTGATGGTACTCGTTCTGTCAGAAACAATATAGAGTCTGTTGTTGAT AAAGAAAAGGTGGGCTCAGATCTTTCCTGCACTGCTTGCGAGATGGCTGTTGTCTGGATA CAGAATCAGCTCCGACATAACCAAACAAGGGAGCTCATTTTGCAATATGCTGACCAGCTC TGCGAGCGTCTCCCAAGCCCCAATGGCGAATCGGCAGTCGACTGCGATGAGATCTCAAAC ATGCCGAACCTTTCATTCACCATAGCAAACAAGACCTTCACCTTGACACCAGAGCAGTAC GTAGTGAAGCTGGAGCAGCAAGGTCAAACTGTTTGCATCAGCGGGTTCATGGCGTTCGAC GTGCCACCTCCACGCGGCCCACTCTGGATTCTTGGAGACGTGTTCATGGCTGCATACCAC ACTGTCTTCGACTTTGGCAAAAACAGGATTGGGTTCGCCGAGTCTGCTTGAATTGCTTGG CTAGGGCCTTCAGGATCATACAACATATCAAGTATTGTAATGTTTGTTAGGCAGCTTGTT TACTCGGTATTGTAACCTGGGAATGTCTAAAGGTATAGTGCATTAGTAGTAGCATGCAAA ACCTTGTAGAGGAATAAACGTTTTCACGATGGAGCTGTATCAGCTATGGATATGCAGATA TGGATCTTGGATGGTGCAATGCAGATGTAATGAGCAAATGAGCACGATGAGAATTAGGGC TTTTTAATCTGATCTCATCATATAGGTAATGGTTTGTCTGGCATATAATGATGGGCCTAA AACTTCTGGCGAGGTTAATAATGGCTGTACTGACTGTTTATGCACCTTAACATTCAGAGT TCAAAATCTCTCATT