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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0286900-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:10312342:10314826:1 gene:Os01g0286900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA4 description:Similar to Auxin-responsive protein IAA31 (Indoleacetic acid-induced protein 31). (Os01t0286900-01)
Sequence

GGCTTAGCCTCTCGACGTCGTCGTCGTCCTCCCTCCGGCGGCGCTCGCCGACGGCGAACG
CTGTTCGTGAAGGTGTACATGGAGGGCGTCCCGATCGGCCGGAAGCTCGACCTGCTCTTG
CTGGATGGGTATGACAGCCTCCTCATCAAGCTCTGCCACATGTTCAAGACGCCCATCACC
TATGCTGATGTTATGGAGTGCCATCAACAAGTTCCTGGCCAGAAGGCTGCCCATGTCCTC
ACCTATGAAGACCAGGACGGGGACTGGATGATGGTTGGGGACGTCCCATGGGAACTCTTC
CTGAGCAGCGTAAAGAAGCTCAGGATTGCAAGGATGGATAAATGCTAA

Peptide Sequence

PEP ID

Os01t0286900-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:10312342:10314826:1 gene:Os01g0286900 transcript:Os01t0286900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA4 description:Similar to Auxin-responsive protein IAA31 (Indoleacetic acid-induced protein 31). (Os01t0286900-01)
Sequence

GLASRRRRRPPSGGARRRRTLFVKVYMEGVPIGRKLDLLLLDGYDSLLIKLCHMFKTPIT
YADVMECHQQVPGQKAAHVLTYEDQDGDWMMVGDVPWELFLSSVKKLRIARMDKC

Transcript Sequence

Transcript ID

Os01t0286900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:10312342:10314826:1 gene:Os01g0286900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA4 description:Similar to Auxin-responsive protein IAA31 (Indoleacetic acid-induced protein 31). (Os01t0286900-01)
Sequence

GCTTGTTTTTTTCTCAACTCGATCCATCTCTCTCTCTCTCTCGATCTCTCCATTAATTTC
TACGTAAGCATTCGTAGCTATGGAGGAGTGCAAGGGCGGTGGCATGTCGCCGTCCTCCTC
CATGGATAGCAGCACCCACCCGGCGCTGTCCACGACGTCGTCGGCGGCGACGGCGAGGCG
GGACCTCAGCACCGATCTCCGGCTAGGGCTTAGCCTCTCGACGTCGTCGTCGTCCTCCCT
CCGGCGGCGCTCGCCGACGGCGAACGCTGTTCGTGAAGGTGTACATGGAGGGCGTCCCGA
TCGGCCGGAAGCTCGACCTGCTCTTGCTGGATGGGTATGACAGCCTCCTCATCAAGCTCT
GCCACATGTTCAAGACGCCCATCACCTATGCTGATGTTATGGAGTGCCATCAACAAGTTC
CTGGCCAGAAGGCTGCCCATGTCCTCACCTATGAAGACCAGGACGGGGACTGGATGATGG
TTGGGGACGTCCCATGGGAACTCTTCCTGAGCAGCGTAAAGAAGCTCAGGATTGCAAGGA
TGGATAAATGCTAAAACAGTTGCATTTGAATTTCTCTTTGTTTCTTCTTTTTTTTTTCCC
ATTGGAGGGAGGGCCCTTATTATATGTAGGTTAGTTGAAAAAGATTTTTGCTGAAGCTGA
GATTATACTTACTAGCAGTGTACATTATAGTAAAGAAGTGTAGCATTATCAGCTACCTAC
CGTATAGCAGAACTGATTATTATTTTTCCTCTACTTCTTTAACTGGTTTGTAAATATCAT
GTATTCGTTAAAGAGAGTAGAGAAGTTGATAACACAAAGGTTCCATTTTACCTCAGTGGA
ATCAAATTTTGTGGCCTTT