Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0286600-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:10291889:10295449:1 gene:Os01g0286600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Proporphyrinogen oxidase, protoporphyrinogen oxidase 1 description:Similar to Plastidal protoporphyrinogen oxidase. (Os01t0286600-01)
Sequence	ATGGCCGCCGCCGCCGCAGCCATGGCCACCGCCACCTCCGCCACGGCAGCGCCGCCGCTC CGCATTCGCGACGCCGCGAGGAGGACCCGCCGACGCGGCCACGTTCGCTGCGCCGTCGCC AGCGGCGCGGCCGAGGCGCCCGCGGCGCCCGGGGCGCGGGTGTCGGCGGACTGCGTCGTG GTGGGCGGCGGCATCAGCGGGCTCTGCACCGCGCAGGCGCTGGCCACAAAGCACGGCGTC GGCGACGTGCTCGTCACGGAGGCCCGCGCCCGCCCCGGCGGCAACATCACCACCGCCGAG CGCGCCGGCGAGGGCTACCTCTGGGAGGAGGGGCCCAACAGCTTCCAGCCTTCCGACCCC GTCCTCACCATGGCCGTGGACAGCGGGCTCAAGGACGATCTCGTGTTCGGGGACCCCAAC GCGCCGCGGTTCGTGCTGTGGGAGGGGAAGCTAAGGCCGGTGCCGTCCAAGCCCGGCGAC CTGCCGTTCTTCGACCTCATGAGCATCCCCGGCAAGCTCAGGGCCGGCCTTGGCGCGCTC GGCGTTCGAGCGCCACCTCCAGGGCGTGAGGAGTCGGTGGAGGACTTCGTGCGGCGCAAC CTCGGCGCGGAGGTCTTTGAGCGCCTCATTGAGCCTTTCTGCTCAGGTGTGTATGCTGGT GATCCTTCAAAGCTCAGTATGAAGGCTGCATTTGGGAAGGTGTGGAGGCTGGAGGATACT GGAGGTAGCATTATTGGTGGAACCATCAAAACAATCCAGGAGAGGGGGAAAAACCCCAAA CCGCCGAGGGATCCCCGCCTTCCAACGCCAAAGGGGCAGACAGTTGCATCTTTCAGGAAG GGTCTGACTATGCTCCCGGATGCTATTACATCTAGGTTGGGTAGCAAAGTCAAACTTTCA TGGAAGTTGACAAGCATTACAAAGTCAGACAACAAAGGATATGCATTAGTGTATGAAACA CCAGAAGGGGTGGTCTCGGTGCAAGCTAAAACTGTTGTCATGACCATCCCATCATATGTT GCTAGTGATATCTTGCGGCCACTTTCAAGTGATGCAGCAGATGCTCTGTCAATATTCTAT TATCCACCAGTTGCTGCTGTAACTGTTTCATATCCAAAAGAAGCAATTAGAAAAGAATGC TTAATTGACGGAGAGCTCCAGGGTTTCGGCCAGCTGCATCCGCGTAGTCAGGGAGTTGAG ACTTTAGGAACAATATATAGCTCATCACTCTTTCCAAATCGTGCTCCAGCTGGAAGGGTG TTACTTCTGAACTACATAGGAGGTTCTACAAATACAGGGATTGTTTCCAAGACTGAAAGT GAGCTGGTAGAAGCAGTTGACCGTGACCTCAGGAAGATGCTGATAAATCCTAAAGCAGTG GACCCTTTGGTCCTTGGCGTCCGGGTATGGCCACAAGCCATACCACAGTTCCTCATTGGC CATCTTGATCATCTTGAGGCTGCAAAATCTGCCCTGGGCAAAGGTGGTTATGATGGATTG TTCCTCGGAGGGAACTATGTTGCAGGAGTTGCCCTGGGCCGATGCGTTGAAGGTGCATAT GAGAGTGCCTCACAAATATCTGACTACTTGACCAAGTACGCCTACAAGTGA

Peptide Sequence

PEP ID	Os01t0286600-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:10291889:10295449:1 gene:Os01g0286600 transcript:Os01t0286600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Proporphyrinogen oxidase, protoporphyrinogen oxidase 1 description:Similar to Plastidal protoporphyrinogen oxidase. (Os01t0286600-01)
Sequence	MAAAAAAMATATSATAAPPLRIRDAARRTRRRGHVRCAVASGAAEAPAAPGARVSADCVV VGGGISGLCTAQALATKHGVGDVLVTEARARPGGNITTAERAGEGYLWEEGPNSFQPSDP VLTMAVDSGLKDDLVFGDPNAPRFVLWEGKLRPVPSKPGDLPFFDLMSIPGKLRAGLGAL GVRAPPPGREESVEDFVRRNLGAEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWRLEDT GGSIIGGTIKTIQERGKNPKPPRDPRLPTPKGQTVASFRKGLTMLPDAITSRLGSKVKLS WKLTSITKSDNKGYALVYETPEGVVSVQAKTVVMTIPSYVASDILRPLSSDAADALSIFY YPPVAAVTVSYPKEAIRKECLIDGELQGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRV LLLNYIGGSTNTGIVSKTESELVEAVDRDLRKMLINPKAVDPLVLGVRVWPQAIPQFLIG HLDHLEAAKSALGKGGYDGLFLGGNYVAGVALGRCVEGAYESASQISDYLTKYAYK

Transcript Sequence

Transcript ID	Os01t0286600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:10291889:10295449:1 gene:Os01g0286600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Proporphyrinogen oxidase, protoporphyrinogen oxidase 1 description:Similar to Plastidal protoporphyrinogen oxidase. (Os01t0286600-01)
Sequence	GCATCGTATCCACTCCTCTCCAGTCTCCCCGCCGCTCCGCATCCCGCAGCCGCTCGTCAG CGACGGACATGGCCGCCGCCGCCGCAGCCATGGCCACCGCCACCTCCGCCACGGCAGCGC CGCCGCTCCGCATTCGCGACGCCGCGAGGAGGACCCGCCGACGCGGCCACGTTCGCTGCG CCGTCGCCAGCGGCGCGGCCGAGGCGCCCGCGGCGCCCGGGGCGCGGGTGTCGGCGGACT GCGTCGTGGTGGGCGGCGGCATCAGCGGGCTCTGCACCGCGCAGGCGCTGGCCACAAAGC ACGGCGTCGGCGACGTGCTCGTCACGGAGGCCCGCGCCCGCCCCGGCGGCAACATCACCA CCGCCGAGCGCGCCGGCGAGGGCTACCTCTGGGAGGAGGGGCCCAACAGCTTCCAGCCTT CCGACCCCGTCCTCACCATGGCCGTGGACAGCGGGCTCAAGGACGATCTCGTGTTCGGGG ACCCCAACGCGCCGCGGTTCGTGCTGTGGGAGGGGAAGCTAAGGCCGGTGCCGTCCAAGC CCGGCGACCTGCCGTTCTTCGACCTCATGAGCATCCCCGGCAAGCTCAGGGCCGGCCTTG GCGCGCTCGGCGTTCGAGCGCCACCTCCAGGGCGTGAGGAGTCGGTGGAGGACTTCGTGC GGCGCAACCTCGGCGCGGAGGTCTTTGAGCGCCTCATTGAGCCTTTCTGCTCAGGTGTGT ATGCTGGTGATCCTTCAAAGCTCAGTATGAAGGCTGCATTTGGGAAGGTGTGGAGGCTGG AGGATACTGGAGGTAGCATTATTGGTGGAACCATCAAAACAATCCAGGAGAGGGGGAAAA ACCCCAAACCGCCGAGGGATCCCCGCCTTCCAACGCCAAAGGGGCAGACAGTTGCATCTT TCAGGAAGGGTCTGACTATGCTCCCGGATGCTATTACATCTAGGTTGGGTAGCAAAGTCA AACTTTCATGGAAGTTGACAAGCATTACAAAGTCAGACAACAAAGGATATGCATTAGTGT ATGAAACACCAGAAGGGGTGGTCTCGGTGCAAGCTAAAACTGTTGTCATGACCATCCCAT CATATGTTGCTAGTGATATCTTGCGGCCACTTTCAAGTGATGCAGCAGATGCTCTGTCAA TATTCTATTATCCACCAGTTGCTGCTGTAACTGTTTCATATCCAAAAGAAGCAATTAGAA AAGAATGCTTAATTGACGGAGAGCTCCAGGGTTTCGGCCAGCTGCATCCGCGTAGTCAGG GAGTTGAGACTTTAGGAACAATATATAGCTCATCACTCTTTCCAAATCGTGCTCCAGCTG GAAGGGTGTTACTTCTGAACTACATAGGAGGTTCTACAAATACAGGGATTGTTTCCAAGA CTGAAAGTGAGCTGGTAGAAGCAGTTGACCGTGACCTCAGGAAGATGCTGATAAATCCTA AAGCAGTGGACCCTTTGGTCCTTGGCGTCCGGGTATGGCCACAAGCCATACCACAGTTCC TCATTGGCCATCTTGATCATCTTGAGGCTGCAAAATCTGCCCTGGGCAAAGGTGGTTATG ATGGATTGTTCCTCGGAGGGAACTATGTTGCAGGAGTTGCCCTGGGCCGATGCGTTGAAG GTGCATATGAGAGTGCCTCACAAATATCTGACTACTTGACCAAGTACGCCTACAAGTGAT CAAAGTTGGCCTGCTCCTTTTGGCACATAGATGTGAGGCTTCTAGCAGCAAAAATTTCAT GGGCATCTTTTTATCCTGATTCTAATTAGTTAGAATTTAGAATTGTAGAGGAATGTTCCA TTTGCAGTTCATAATAGTTGTTCAGATTTCAGCCATTCAATTTGTGCAGCCATTTACTAT ATGTAGTATGATCTTGTAAGTACTACTAAGAACAAATCAATTATATTTTCCTGCAAGTGA CATCTC