Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0283500-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:10137726:10140159:-1 gene:Os01g0283500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Rhomboid 3, RHOMBOID 3 description:Similar to predicted protein. (Os01t0283500-01);Peptidase S54, rhomboid domain containing protein. (Os01t0283500-02)
Sequence	ATGGGGGCCGGAATGAGCAGCGGCCGGCGGCCGAGCTTCTACGGCGGCGGCGGCGGCGGC GGGGTCGGCCGGCCGAGAGGGATGCTGCCCCTGCTGGCGCTGCAGGTGCTGCTCGAGTAC GGCCGCGCGGGCGCCAGCCGGCCCCCCGTGACGGCGGCGCTGCTCGCCGCCAACGCGCTG CTGTACCTCCGCCCAGGCTCCCTCGACGCGCTCCTCCCTTCGCTCAACCGCGTCGCCTTC AACCCTCACCTCATCATTCACTACTGTGACCTGACACGCTTCTTCCTGTCGGCTTTCTAC CACTTGAGCGAAACTCACTTCTTCTTCAACATGTCATCTCTCTTATGGAAGGGCATCCAG CTTGAAACATCCATGGGTAGTGTTGAGTTTGCCTCTATGGTTGCTGCATTGCTTGGCATG TCACAAGGCATCACACTACTTTTGTCCAAAGGTTTACTCCTGTTCGGCAATGATGAGGCT TATTATGATCAATATGCTGTTGGATTCTCTGGAGTACTATTTGGTATGAAGGTCGTGCTG AATGCCTGGTCAGACGATTATGTCTTTCTTCATGGGGTGGTTATTCCAGCAAAATATGCT GCCTGGGCTGAATTACTCCTCATTCAGGCTTTTATTCCTGGGACATCTCTTATTGGCCAT CTCGGTGGAATACTTGCTGGATTGGCCTACCTTTGGCTTAAGCGATCATTCTCTGGGCCA GACCCGCTTTCTCTTCTGATTTCAGGAATTGGAAAAGCTGTGAGATGGCCAGTAGGGTTT GTTCAGAAGCTTTTCAGGTCTGGCCGTCCTCAGGGTTACACCCCAAGTCGAGGCAGAGTT GGCCGTGGTTCAGCAAGAGAGAATGGTCGAGGTATATGGAGATGCTCAGCCTGCACTTAT GACAACTCGCCGTCGACAGATATCTGTGAAATGTGCAGCAGTGCACGTGAGGACCATGCT TTTTCTCATAGACAGCACCTCCAAGCTGGGGGGAATGGGGAGCCATCGGTTGAGGAGATT CGCCGTAGGAGGCTCGAGAGATTTTCCAGATGA

Peptide Sequence

PEP ID	Os01t0283500-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:10137726:10140159:-1 gene:Os01g0283500 transcript:Os01t0283500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Rhomboid 3, RHOMBOID 3 description:Similar to predicted protein. (Os01t0283500-01);Peptidase S54, rhomboid domain containing protein. (Os01t0283500-02)
Sequence	MGAGMSSGRRPSFYGGGGGGGVGRPRGMLPLLALQVLLEYGRAGASRPPVTAALLAANAL LYLRPGSLDALLPSLNRVAFNPHLIIHYCDLTRFFLSAFYHLSETHFFFNMSSLLWKGIQ LETSMGSVEFASMVAALLGMSQGITLLLSKGLLLFGNDEAYYDQYAVGFSGVLFGMKVVL NAWSDDYVFLHGVVIPAKYAAWAELLLIQAFIPGTSLIGHLGGILAGLAYLWLKRSFSGP DPLSLLISGIGKAVRWPVGFVQKLFRSGRPQGYTPSRGRVGRGSARENGRGIWRCSACTY DNSPSTDICEMCSSAREDHAFSHRQHLQAGGNGEPSVEEIRRRRLERFSR

Transcript Sequence

Transcript ID	Os01t0283500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:10137726:10140159:-1 gene:Os01g0283500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Rhomboid 3, RHOMBOID 3 description:Similar to predicted protein. (Os01t0283500-01);Peptidase S54, rhomboid domain containing protein. (Os01t0283500-02)
Sequence	ACAAGGGAATTGCGTGGCGTGTCGACTTCCAAGTCTTCCGCCTTCGTTGGCCCCACCAGT CAGTGACCCAGTCAATCTCCGGCGATGGGGGCCGGAATGAGCAGCGGCCGGCGGCCGAGC TTCTACGGCGGCGGCGGCGGCGGCGGGGTCGGCCGGCCGAGAGGGATGCTGCCCCTGCTG GCGCTGCAGGTGCTGCTCGAGTACGGCCGCGCGGGCGCCAGCCGGCCCCCCGTGACGGCG GCGCTGCTCGCCGCCAACGCGCTGCTGTACCTCCGCCCAGGCTCCCTCGACGCGCTCCTC CCTTCGCTCAACCGCGTCGCCTTCAACCCTCACCTCATCATTCACTACTGTGACCTGACA CGCTTCTTCCTGTCGGCTTTCTACCACTTGAGCGAAACTCACTTCTTCTTCAACATGTCA TCTCTCTTATGGAAGGGCATCCAGCTTGAAACATCCATGGGTAGTGTTGAGTTTGCCTCT ATGGTTGCTGCATTGCTTGGCATGTCACAAGGCATCACACTACTTTTGTCCAAAGGTTTA CTCCTGTTCGGCAATGATGAGGCTTATTATGATCAATATGCTGTTGGATTCTCTGGAGTA CTATTTGGTATGAAGGTCGTGCTGAATGCCTGGTCAGACGATTATGTCTTTCTTCATGGG GTGGTTATTCCAGCAAAATATGCTGCCTGGGCTGAATTACTCCTCATTCAGGCTTTTATT CCTGGGACATCTCTTATTGGCCATCTCGGTGGAATACTTGCTGGATTGGCCTACCTTTGG CTTAAGCGATCATTCTCTGGGCCAGACCCGCTTTCTCTTCTGATTTCAGGAATTGGAAAA GCTGTGAGATGGCCAGTAGGGTTTGTTCAGAAGCTTTTCAGGTCTGGCCGTCCTCAGGGT TACACCCCAAGTCGAGGCAGAGTTGGCCGTGGTTCAGCAAGAGAGAATGGTCGAGGTATA TGGAGATGCTCAGCCTGCACTTATGACAACTCGCCGTCGACAGATATCTGTGAAATGTGC AGCAGTGCACGTGAGGACCATGCTTTTTCTCATAGACAGCACCTCCAAGCTGGGGGGAAT GGGGAGCCATCGGTTGAGGAGATTCGCCGTAGGAGGCTCGAGAGATTTTCCAGATGACGT GAACCATTGCTCTAGCAAATCAAGTTTTTTGTGGTACAGGAAGGAAGCTAATTCTCATGA AAACTGAAAAATGCCCTTTCATGCCTTCCTGTGCTATTGCTACATAGCTTCAGAACATTC TTGTGTCCAATGAATACTGAAGTTTTAACTTGCCTATTCAAGTTTATTGCTACTAAGTAT TTAGCTCCATTCTTTAGGATCCCCTCATAATATATCTTTAGGTTGTCTCATCAGCTATGC CTTCAAAGTATGTAATTATGTCCTTTTTTCTGGATAAATGGAGTATTACAGTAGTTGACT TCGGC