Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0281400-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:10021423:10027120:-1 gene:Os01g0281400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer, beta subunit domain containing protein. (Os01t0281400-00)
Sequence	ATGGAGAAGCCGAGCACGCTGCTGGTCCACTTCGACAAGGGCTCCGCCGCCATGGCCGGT GAGATCAAGGCGGATCTCGAGGGCAGCGACGTGGCCGCCAAGGTGGACGCCATGAAGCGC GCCGTCATGCTCCTCCTCAACGGCGAGACCCTCCCCACCCTCTTCATCACCGTCGTCCGC TACGTCCTCCCCTCCGAGGACCACACCATCCAGAAGCTGCTCCTCCTCTACCTCGAGATC ATCGACAAGCGCGACGCCGCCGGCAGGGGCCTCCCGGAGATGATCCTCATCTGCCAGAAC CTCCGCAACAACCTCCACCACCCCAACGAGTACATCCGCGGCGTCACCCTCCGCTTCCTC TGCCGCCTCTCCGAGCCCGAGGTGCTCGAGCCGCTCGTGCCCTCCATCCTCGAGAACCTC GACCACCGCCACCACTTCATCAGGCGCCACGCGCTCTCCGCGATCTCCTCCATCTACCGC CTCCCGCACGGCGACCAGCTCGTCCCCGACGCGCCCGAGCTCGTGGAGCGCGCGCTCGCC TCGGAGCAGGACGCCTCCGCGCGCCGGAACGCGTTCCTCATGCTCTGCACCTGCGCGCAG GAGCGCGCCGTCGCGTACCTGCTCTCCAACGCCGACCGCGTCGCCGAGTGGCCCGACCTC CTGCAGATGGCCGCCGTCGATCTCATCCGCAAGGTCTGCCGCTCCCCGAACCGCGCCGAC AAGGGAAGGTATATCAAGATCATCATCGCCCTTTTGTCATCCCCCAGCACCGCTGTTGTC TATGAGTGCGCTGGTGCGCTCGTGTCGCTCTCCTCGGCGCCCACTGCCGTGCGCGCTGCC GCAAACACGTACTGCGAGCTGCTGTCGTCACAGAGCGACAACAATGTGAAGCTCATTGTC CTGGACCGCCTGAATGAGCTGCGCACCTCGCACCGTGATGTGATGGTGGATGTAGTGATG GACGTGCTGCGTGCACTCGCCAGTCCCAACTTGGATGTTAAGAGGAAGGTGCTGGATTTG GTGCTCGATCTGCTCACCGCTCGTAATGTGGAGGAGGTTGTTCTGTACCTCAAGAAGGAG GTGGTCAAGACGCAGGCAGGGGAACTTGAGAAGAGTGGTGAATACCGCCAGATGCTGGTG CAGGCGATCCATGCCTGTGCTGTGGAGTATCCAGAGGTGGCTGGGTCAGTGGTGCACCTA CTCATGGATTTCCTTGGTGACACTAATGTTGCTGCTGCAGTTGATGTTGTGTTGTTCGTG CGTGAGATCATTGAGACTAATCCCAAGCTGCGTGTGTCCATGATCCAGAGATTGATTGAT ACATTCTATCAGATCCGGGCATCCCGTGTGTGCTCGTGTGCTTTGTGGATCCTTGGGGAG TACTCTCTCTCCTTATCAGAGGTTGAGAATGCTATCTCCACCATTAAGCAATGCCTTGGC GATGTACCGTTCTATACAGTATCTGAGGAAGGGGAGGCAACTGACTCAGCCAAGCCAGCA CAACCAGTGGTGAACTCTGTTACCGTGTCTTCTAGGCGGCCTGTTGTTCTTGCAGACGGC ACTTATGCCACACAGAGTGCTGCCACTGAGGCCATTTCTACTCCATCAGTTGCTCCTGGG TCATTATCATCGACCCTGAATCTCAGATCACTCATTCTGTCAGGCGATTTCTTCTTGGCT GCCGTTATTTCCTGTACCTTGACCAAACTTGTATTGAGGCTGGAGGAGGTTCAGCCCTCA ATGGTTGAAGTGAACAAGGCTTGTACTGGGGCTTTGCTGGTCATGACATCCATTCTGCAG CTGGGACAATCATCTTACCTTCCACACCCAATTGATAATGATTCATATGACAGGATAGTG CTTTGTGTGAGGTTGCTTTGCAATACTGGTGATGATGTCAGGAAGGTCTGGTTACAGTCA TGTAGGCAGAGCTTTGCAAAGATGCTTGCTGAGAAGCAGTTCCGGGAGACAGAGGAGATG AAGGCAAAGGCACAGATCTCTCACGCTCAACCAGATGATCTTATAGATTTCTACCACCTG AAGAGCAGAAGGGGCATGAGTCAGCTTGAGTTGGAAGATGAAGTTCAAGATGACTTGAAG GCTGCAACTGGTGGGTTTACTAAGGATGCATATGATGCAAACAGACTTAACCGCATTCTT CAGTTGACTGGATTCAGTGATCCTGTGTATGCTGAAGCATATGTGACAGTTCATCATTAT GATATTGTACTTGATGTGACTATCATTAACCGTACAAAGGAGACACTTCAGAACTTGTGC TTGGAATTGGCTACAATGGGAGACCTCAAACTTGTTGACCGCCCTCAGAACTACACCTTG GCTCCTGAGTCAAGCAAACAAATCCGTGCTAATATCAAGGTTTCATCAACAGAGACTGGA GTAATATTTGGGAACATTGTTTATGAAACTTCAAATGTGATGGAGCGATCAGTGGTTGTG CTAAATGATATTCACATTGACATCATGGATTATATCTCACCAGCAACTTGCGCTGATGTT ACTTTCCGTAACATGTGGGCAGAATTTGAGTGGGAAAACAAGGTGGCAGTGAATACTGTC ATTCAGAATGAGAAGGAGTTTTTGGATCATATCATCAAGTCAACAAACATGAAGTGTCTA ACACCACCGTCTGCGCTTGACGGAGAATGCGGTTTTCTCGCCGCTAACCTTTATGCAAAG AGTGTTTTCGGTGAAGATGCTTTGGTAAATATCAGCATCGAGAAGCAGTTTGATGGCAAG CTCAGTGGTTACATCAGAATAAGGAGCAAGACCCAGGGAATCGCACTCAGCTTAGGAGAC AAGATTACCCTCAAGCAGAAGGGAGGCAGTTAA

Peptide Sequence

PEP ID	Os01t0281400-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:10021423:10027120:-1 gene:Os01g0281400 transcript:Os01t0281400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer, beta subunit domain containing protein. (Os01t0281400-00)
Sequence	MEKPSTLLVHFDKGSAAMAGEIKADLEGSDVAAKVDAMKRAVMLLLNGETLPTLFITVVR YVLPSEDHTIQKLLLLYLEIIDKRDAAGRGLPEMILICQNLRNNLHHPNEYIRGVTLRFL CRLSEPEVLEPLVPSILENLDHRHHFIRRHALSAISSIYRLPHGDQLVPDAPELVERALA SEQDASARRNAFLMLCTCAQERAVAYLLSNADRVAEWPDLLQMAAVDLIRKVCRSPNRAD KGRYIKIIIALLSSPSTAVVYECAGALVSLSSAPTAVRAAANTYCELLSSQSDNNVKLIV LDRLNELRTSHRDVMVDVVMDVLRALASPNLDVKRKVLDLVLDLLTARNVEEVVLYLKKE VVKTQAGELEKSGEYRQMLVQAIHACAVEYPEVAGSVVHLLMDFLGDTNVAAAVDVVLFV REIIETNPKLRVSMIQRLIDTFYQIRASRVCSCALWILGEYSLSLSEVENAISTIKQCLG DVPFYTVSEEGEATDSAKPAQPVVNSVTVSSRRPVVLADGTYATQSAATEAISTPSVAPG SLSSTLNLRSLILSGDFFLAAVISCTLTKLVLRLEEVQPSMVEVNKACTGALLVMTSILQ LGQSSYLPHPIDNDSYDRIVLCVRLLCNTGDDVRKVWLQSCRQSFAKMLAEKQFRETEEM KAKAQISHAQPDDLIDFYHLKSRRGMSQLELEDEVQDDLKAATGGFTKDAYDANRLNRIL QLTGFSDPVYAEAYVTVHHYDIVLDVTIINRTKETLQNLCLELATMGDLKLVDRPQNYTL APESSKQIRANIKVSSTETGVIFGNIVYETSNVMERSVVVLNDIHIDIMDYISPATCADV TFRNMWAEFEWENKVAVNTVIQNEKEFLDHIIKSTNMKCLTPPSALDGECGFLAANLYAK SVFGEDALVNISIEKQFDGKLSGYIRIRSKTQGIALSLGDKITLKQKGGS

Transcript Sequence

Transcript ID	Os01t0281400-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:10021423:10027120:-1 gene:Os01g0281400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer, beta subunit domain containing protein. (Os01t0281400-00)
Sequence	TCTTCCATCCGTCCCACCACTCCTTCCACCCACCCCTCAGATCCCGATCCAACCCCCCCT CCTCCTCCGCTGTCCAGATCCAGCCGCCGCCGCCGCCGTCGCCGGCGGGCGGCGTGGCCA GATCCGGCGCCATGGAGAAGCCGAGCACGCTGCTGGTCCACTTCGACAAGGGCTCCGCCG CCATGGCCGGTGAGATCAAGGCGGATCTCGAGGGCAGCGACGTGGCCGCCAAGGTGGACG CCATGAAGCGCGCCGTCATGCTCCTCCTCAACGGCGAGACCCTCCCCACCCTCTTCATCA CCGTCGTCCGCTACGTCCTCCCCTCCGAGGACCACACCATCCAGAAGCTGCTCCTCCTCT ACCTCGAGATCATCGACAAGCGCGACGCCGCCGGCAGGGGCCTCCCGGAGATGATCCTCA TCTGCCAGAACCTCCGCAACAACCTCCACCACCCCAACGAGTACATCCGCGGCGTCACCC TCCGCTTCCTCTGCCGCCTCTCCGAGCCCGAGGTGCTCGAGCCGCTCGTGCCCTCCATCC TCGAGAACCTCGACCACCGCCACCACTTCATCAGGCGCCACGCGCTCTCCGCGATCTCCT CCATCTACCGCCTCCCGCACGGCGACCAGCTCGTCCCCGACGCGCCCGAGCTCGTGGAGC GCGCGCTCGCCTCGGAGCAGGACGCCTCCGCGCGCCGGAACGCGTTCCTCATGCTCTGCA CCTGCGCGCAGGAGCGCGCCGTCGCGTACCTGCTCTCCAACGCCGACCGCGTCGCCGAGT GGCCCGACCTCCTGCAGATGGCCGCCGTCGATCTCATCCGCAAGGTCTGCCGCTCCCCGA ACCGCGCCGACAAGGGAAGGTATATCAAGATCATCATCGCCCTTTTGTCATCCCCCAGCA CCGCTGTTGTCTATGAGTGCGCTGGTGCGCTCGTGTCGCTCTCCTCGGCGCCCACTGCCG TGCGCGCTGCCGCAAACACGTACTGCGAGCTGCTGTCGTCACAGAGCGACAACAATGTGA AGCTCATTGTCCTGGACCGCCTGAATGAGCTGCGCACCTCGCACCGTGATGTGATGGTGG ATGTAGTGATGGACGTGCTGCGTGCACTCGCCAGTCCCAACTTGGATGTTAAGAGGAAGG TGCTGGATTTGGTGCTCGATCTGCTCACCGCTCGTAATGTGGAGGAGGTTGTTCTGTACC TCAAGAAGGAGGTGGTCAAGACGCAGGCAGGGGAACTTGAGAAGAGTGGTGAATACCGCC AGATGCTGGTGCAGGCGATCCATGCCTGTGCTGTGGAGTATCCAGAGGTGGCTGGGTCAG TGGTGCACCTACTCATGGATTTCCTTGGTGACACTAATGTTGCTGCTGCAGTTGATGTTG TGTTGTTCGTGCGTGAGATCATTGAGACTAATCCCAAGCTGCGTGTGTCCATGATCCAGA GATTGATTGATACATTCTATCAGATCCGGGCATCCCGTGTGTGCTCGTGTGCTTTGTGGA TCCTTGGGGAGTACTCTCTCTCCTTATCAGAGGTTGAGAATGCTATCTCCACCATTAAGC AATGCCTTGGCGATGTACCGTTCTATACAGTATCTGAGGAAGGGGAGGCAACTGACTCAG CCAAGCCAGCACAACCAGTGGTGAACTCTGTTACCGTGTCTTCTAGGCGGCCTGTTGTTC TTGCAGACGGCACTTATGCCACACAGAGTGCTGCCACTGAGGCCATTTCTACTCCATCAG TTGCTCCTGGGTCATTATCATCGACCCTGAATCTCAGATCACTCATTCTGTCAGGCGATT TCTTCTTGGCTGCCGTTATTTCCTGTACCTTGACCAAACTTGTATTGAGGCTGGAGGAGG TTCAGCCCTCAATGGTTGAAGTGAACAAGGCTTGTACTGGGGCTTTGCTGGTCATGACAT CCATTCTGCAGCTGGGACAATCATCTTACCTTCCACACCCAATTGATAATGATTCATATG ACAGGATAGTGCTTTGTGTGAGGTTGCTTTGCAATACTGGTGATGATGTCAGGAAGGTCT GGTTACAGTCATGTAGGCAGAGCTTTGCAAAGATGCTTGCTGAGAAGCAGTTCCGGGAGA CAGAGGAGATGAAGGCAAAGGCACAGATCTCTCACGCTCAACCAGATGATCTTATAGATT TCTACCACCTGAAGAGCAGAAGGGGCATGAGTCAGCTTGAGTTGGAAGATGAAGTTCAAG ATGACTTGAAGGCTGCAACTGGTGGGTTTACTAAGGATGCATATGATGCAAACAGACTTA ACCGCATTCTTCAGTTGACTGGATTCAGTGATCCTGTGTATGCTGAAGCATATGTGACAG TTCATCATTATGATATTGTACTTGATGTGACTATCATTAACCGTACAAAGGAGACACTTC AGAACTTGTGCTTGGAATTGGCTACAATGGGAGACCTCAAACTTGTTGACCGCCCTCAGA ACTACACCTTGGCTCCTGAGTCAAGCAAACAAATCCGTGCTAATATCAAGGTTTCATCAA CAGAGACTGGAGTAATATTTGGGAACATTGTTTATGAAACTTCAAATGTGATGGAGCGAT CAGTGGTTGTGCTAAATGATATTCACATTGACATCATGGATTATATCTCACCAGCAACTT GCGCTGATGTTACTTTCCGTAACATGTGGGCAGAATTTGAGTGGGAAAACAAGGTGGCAG TGAATACTGTCATTCAGAATGAGAAGGAGTTTTTGGATCATATCATCAAGTCAACAAACA TGAAGTGTCTAACACCACCGTCTGCGCTTGACGGAGAATGCGGTTTTCTCGCCGCTAACC TTTATGCAAAGAGTGTTTTCGGTGAAGATGCTTTGGTAAATATCAGCATCGAGAAGCAGT TTGATGGCAAGCTCAGTGGTTACATCAGAATAAGGAGCAAGACCCAGGGAATCGCACTCA GCTTAGGAGACAAGATTACCCTCAAGCAGAAGGGAGGCAGTTAACTGCCATGACTCTGTC ACGGTTGTATCATCATTTTTAGTAAATTCCACGCTTTAGTGGGATTGAATTGTTGAGTAA AGTTCTTTTTTGTACAAAAGATCAAAGAAAGGAAAGAGAACCGGGATGATGTTCCCAGTT GGATAATGCTCCAGAGCTATTGAAGGACGACAAGGTTTAGTTCAATCCGGATTTGCCTCC TGTCCCTGTTATTGGAGTGTTAGTCTTTTTGATAAAAAGAAATGACGATGTAGAAATAGA TGTGAAGTTTTTGTCGATTATTATTAACAGGCAGAGCAATTGTGGCCTTTGTGTTACGAC CGCCTACCTTGTCTTGTGTTTATTTGTTCGGTTAAAGTTCAAAAGGAGGTATATCGCACA TTCACACTTAATTGTTGTTTTCAATAATCCATTTGGGTTCGCTTTTGTTTTGTTTAATTT TC