Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0281100-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:10008075:10011595:-1 gene:Os01g0281100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0281100-01)
Sequence

ATGCAGATGAGTAGCATGGCATGCCATTCCCTTCCAGAGAGTGGAAGCAACTTGTCAGCT
GCTGATGAACTCTTTCAGAACCAAAGGTCAGAGCAGGGAATTTACTGGACACTCTGGGAC
TCCAGGCTATCTGATGATCTGAACACAACGACCGTATATTCAGACAATCATGGCAGCAAC
GGTGGCGGCACGCAATCTTTCGACACCTCTGAACATTGCAGTACAGTGCCTTCAGATTCA
GATGAGCAACCTGGATATCCATCACAGTTTGAGCCTCTGCACATGGAGCAAACAAACGAC
ATGTTCTTGAGCCAGTTTTCAGATGAGGAGGTGAGGAGGATGGATGCTCCGTTCCAGGCG
CTGGACATGTTCCCGGACTCCATGCACAGGCTCATGTCCTACGAACACATACTGAACGGA
GCTCTGGTGTCCGATTCCAAGAATCAGGAGGTGAACATGGATCAAGACGACATGGACACC
TGCGGTTTCCCTCTCTACTTCAGCCATGGCCTGCAAGATGATGGCGGCTTGCCTTCTTTT
GCCAAGGGGATGGTTGCTGCAGACACCTCCTCCATGGACAAGGCTGGAGCGAGCGCGACG
GAGAGAGGCGATCCGGGGAGTTCGCCGCCGGGATTCGAAGAAGCTGTGCTCGAGGAGCTC
GAGGAGGTGATGGTGCAGATGGCGAGGACGACGCGGATATGCCTCCGCGACGCCTTCTAC
CGGCTGGCCGAGGGCTCGAGGTCGCCGCGCTCCGCCGCCGCCGCCGCAGACGGCGCCACC
GTCGCCGAGGCCACCAGTGCGTCGACGACGCGGCCGCGCCGTCGCCGCGACGCGATCGAC
AGGACGGTGGTGAGCCTCACCTTCAGGCCGCCGCCGTGCTCGCCGGAAGCAGAGGCGGCG
ATGATGCGGCCCACGCGTGCCTGA

Peptide Sequence

PEP ID

Os01t0281100-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:10008075:10011595:-1 gene:Os01g0281100 transcript:Os01t0281100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0281100-01)
Sequence

MQMSSMACHSLPESGSNLSAADELFQNQRSEQGIYWTLWDSRLSDDLNTTTVYSDNHGSN
GGGTQSFDTSEHCSTVPSDSDEQPGYPSQFEPLHMEQTNDMFLSQFSDEEVRRMDAPFQA
LDMFPDSMHRLMSYEHILNGALVSDSKNQEVNMDQDDMDTCGFPLYFSHGLQDDGGLPSF
AKGMVAADTSSMDKAGASATERGDPGSSPPGFEEAVLEELEEVMVQMARTTRICLRDAFY
RLAEGSRSPRSAAAAADGATVAEATSASTTRPRRRRDAIDRTVVSLTFRPPPCSPEAEAA
MMRPTRA

Transcript Sequence

Transcript ID

Os01t0281100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:10008075:10011595:-1 gene:Os01g0281100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0281100-01)
Sequence

GACTCCTCCTGCTCTGTTTGTTCGAGTAATTAATTAAGCTCCGACCACGAAGCTTCTGGC
GATTGTCGGCGTCAAGAACAGCTTGACGAGCAGGCAGCAAGAGGATTCGTTCTTCTTCTG
TGGTGGATCTTGATTGGGCTCCCTGTTTTAGTGTTCTGTTCTTCGCAAGAAAGGGGCCAT
TCTCTTTTGGTTTCTACATGCAGATGAGTAGCATGGCATGCCATTCCCTTCCAGAGAGTG
GAAGCAACTTGTCAGCTGCTGATGAACTCTTTCAGAACCAAAGGTCAGAGCAGGGAATTT
ACTGGACACTCTGGGACTCCAGGCTATCTGATGATCTGAACACAACGACCGTATATTCAG
ACAATCATGGCAGCAACGGTGGCGGCACGCAATCTTTCGACACCTCTGAACATTGCAGTA
CAGTGCCTTCAGATTCAGATGAGCAACCTGGATATCCATCACAGTTTGAGCCTCTGCACA
TGGAGCAAACAAACGACATGTTCTTGAGCCAGTTTTCAGATGAGGAGGTGAGGAGGATGG
ATGCTCCGTTCCAGGCGCTGGACATGTTCCCGGACTCCATGCACAGGCTCATGTCCTACG
AACACATACTGAACGGAGCTCTGGTGTCCGATTCCAAGAATCAGGAGGTGAACATGGATC
AAGACGACATGGACACCTGCGGTTTCCCTCTCTACTTCAGCCATGGCCTGCAAGATGATG
GCGGCTTGCCTTCTTTTGCCAAGGGGATGGTTGCTGCAGACACCTCCTCCATGGACAAGG
CTGGAGCGAGCGCGACGGAGAGAGGCGATCCGGGGAGTTCGCCGCCGGGATTCGAAGAAG
CTGTGCTCGAGGAGCTCGAGGAGGTGATGGTGCAGATGGCGAGGACGACGCGGATATGCC
TCCGCGACGCCTTCTACCGGCTGGCCGAGGGCTCGAGGTCGCCGCGCTCCGCCGCCGCCG
CCGCAGACGGCGCCACCGTCGCCGAGGCCACCAGTGCGTCGACGACGCGGCCGCGCCGTC
GCCGCGACGCGATCGACAGGACGGTGGTGAGCCTCACCTTCAGGCCGCCGCCGTGCTCGC
CGGAAGCAGAGGCGGCGATGATGCGGCCCACGCGTGCCTGAGGAGGCCGAGCTCGCCGTC
GCCGGATCACCGGAGGACAGGAGGAGATTCGCTTGGTTTTTCTTTCCAGTGCGATCTTGC
TCGCCGCATTGCAAGCTCACTGGCTTGCCTGACGAAGGATACACTGTGTATGTGACCTGC
AGCTTTGCCATGAGAGCTTTCTATGTTCCAAGCATGTGGAATTTGATGCTTGGTTTTTGT
AACATCCCGGCCTAGGGCTTAATAGGATTAATAGAATACTCATATCAACAAGTTGCAACT
TCTTTTCCGGAAGCCAATCTTCAAAGAACTCTAGGTAACCTGGAGCAATTTGGGATGGGT
GACCGACCGGGAAATTCCTCCCGGGTGCACACGAGTGAGGACAAAGTGTGCAGAAAAGAT
ATGTGCCCCCTCTGTGAGGGCAGTCTATGACCTATGAAAGCTATCAGATGTAAACGGGTC
CGGCCTGGGGGAAGGCGGGATGTTACAGTTTTGATGTTGCTTTTAGTACATTTTTGTAAT
GGATTGACAAATTTTGACGTTTGTGGGGGC