Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0279900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:9928971:9935981:1 gene:Os01g0279900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:b-ZIP TRANSCRIPTION FACTOR 3 description:Similar to Transcription factor TGA6 (AtbZIP45). Splice isoform 2. (Os01t0279900-01)
Sequence	ATGGCAGATATGAGCCCTAGGACAGATACATCAACAGATGATACCGATGATAACCACATG CTTGAACCAGGTCAGCTTGCTCTTGCTGCTGCTTCTGACTCTGACAGATCCAAGGACAAA CATGAAGATCAAAAGACATTGCGTCGGCTCGCCCAAAATCGCGAGGCTGCAAGGAAGAGT CGTTTGAGGAAAAAGGCATATGTTCAACAATTGGAGAATAGCAGGCTAAAGCTTACACAA CTAGAACAAGAATTGCAACGAGCTCGTCAGCAGGGCATTTTTATATCCAGCTCAGTGGAC CAGACTCATTCCATGAGTGGAAATGGGGCATTGGCTTTTGATATGGAGTATGCACGTTGG TTGGAAGAACACAATAGGCAAATTAATGAGCTAAGGTCTGCAGTCAATGCTCATGCAGGT GATAATGAGCTCCGTGGTGTTGTTGACAAGATCATGTCACACTATGAGGAGATTTTCAAG CAGAAAGGAAATGCGGCCAAAGCAGATGTCTTTCATGTGTTATCAGGCATGTGGAAGACA CCAGCTGAGAGGTGTTTCTTGTGGCTAGGAGGATTCCGACCATCCGAGCTTTTAAAGCTT CTTTCGACACAGCTTGAACCTCTCACTGAGCAGCAGCTGTCAGGGATAGCCAACCTTCAG CAGTCTTCACAACAAGCTGAAGATGCTCTTTCACAAGGAATGGAGGCCCTTCAGCAGTCC TTGGCAGAAACATTGGCTGGGTCTCTTGGTTCTTCTGGATCAACGGGAAACGTGGCAAAC TACATGGGCCAAATGGCAATGGCCATGGGGAAGCTTGGGACCCTTGAGAATTTCCTTCGC CAGGCTGACAACCTGCGGCAGCAGACTCTTCAACAGATGCAAAGGATACTGACCACTAGG CAGTCTGCCCGTGCGCTTCTTGTGATAAGCGATTACTCTTCGCGGCTTCGTGCCCTTAGT TCCCTCTGGCTTGCTCGGCCGAAAGAATAG

Peptide Sequence

PEP ID	Os01t0279900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:9928971:9935981:1 gene:Os01g0279900 transcript:Os01t0279900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:b-ZIP TRANSCRIPTION FACTOR 3 description:Similar to Transcription factor TGA6 (AtbZIP45). Splice isoform 2. (Os01t0279900-01)
Sequence	MADMSPRTDTSTDDTDDNHMLEPGQLALAAASDSDRSKDKHEDQKTLRRLAQNREAARKS RLRKKAYVQQLENSRLKLTQLEQELQRARQQGIFISSSVDQTHSMSGNGALAFDMEYARW LEEHNRQINELRSAVNAHAGDNELRGVVDKIMSHYEEIFKQKGNAAKADVFHVLSGMWKT PAERCFLWLGGFRPSELLKLLSTQLEPLTEQQLSGIANLQQSSQQAEDALSQGMEALQQS LAETLAGSLGSSGSTGNVANYMGQMAMAMGKLGTLENFLRQADNLRQQTLQQMQRILTTR QSARALLVISDYSSRLRALSSLWLARPKE

Transcript Sequence

Transcript ID	Os01t0279900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:9928971:9935981:1 gene:Os01g0279900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:b-ZIP TRANSCRIPTION FACTOR 3 description:Similar to Transcription factor TGA6 (AtbZIP45). Splice isoform 2. (Os01t0279900-01)
Sequence	GCAAACCCTCCTCCTCTCCTCCCCTCTCCGCCCCCGCCGCCGGCCGTGCCCCTCCTCCTC CTCCTCCTCCGGCCGAAGCGCGCCGCCCACGAGCATCAGCTCCCCCTCCTCGTCCCTCCC TCCCTCCCCACTGTCCGCCGGACTGACGGTGGGGGGCGCCTCTCCCGCCCACGAGGATAG AAAGCCCTAGCTTCGTCTCTGCTCTGTGCCTCCGCCGCTCTTCCCCCGCTGGCCGGACGG CGGCTGCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCATTCGTCGCTCGTCGACCCCT CTCCGCCGCCGAGGCTCGCTGTCCCAAGGCAGTAACAATTGGATCTACATCTTGCCACTA CAAAAGGATCAACGATCTGTACTAGCCTTCATTTGTGGGTTCCTCATTGGGAATTGGGAT TCTTTACAATGGCAGATATGAGCCCTAGGACAGATACATCAACAGATGATACCGATGATA ACCACATGCTTGAACCAGGTCAGCTTGCTCTTGCTGCTGCTTCTGACTCTGACAGATCCA AGGACAAACATGAAGATCAAAAGACATTGCGTCGGCTCGCCCAAAATCGCGAGGCTGCAA GGAAGAGTCGTTTGAGGAAAAAGGCATATGTTCAACAATTGGAGAATAGCAGGCTAAAGC TTACACAACTAGAACAAGAATTGCAACGAGCTCGTCAGCAGGGCATTTTTATATCCAGCT CAGTGGACCAGACTCATTCCATGAGTGGAAATGGGGCATTGGCTTTTGATATGGAGTATG CACGTTGGTTGGAAGAACACAATAGGCAAATTAATGAGCTAAGGTCTGCAGTCAATGCTC ATGCAGGTGATAATGAGCTCCGTGGTGTTGTTGACAAGATCATGTCACACTATGAGGAGA TTTTCAAGCAGAAAGGAAATGCGGCCAAAGCAGATGTCTTTCATGTGTTATCAGGCATGT GGAAGACACCAGCTGAGAGGTGTTTCTTGTGGCTAGGAGGATTCCGACCATCCGAGCTTT TAAAGCTTCTTTCGACACAGCTTGAACCTCTCACTGAGCAGCAGCTGTCAGGGATAGCCA ACCTTCAGCAGTCTTCACAACAAGCTGAAGATGCTCTTTCACAAGGAATGGAGGCCCTTC AGCAGTCCTTGGCAGAAACATTGGCTGGGTCTCTTGGTTCTTCTGGATCAACGGGAAACG TGGCAAACTACATGGGCCAAATGGCAATGGCCATGGGGAAGCTTGGGACCCTTGAGAATT TCCTTCGCCAGGCTGACAACCTGCGGCAGCAGACTCTTCAACAGATGCAAAGGATACTGA CCACTAGGCAGTCTGCCCGTGCGCTTCTTGTGATAAGCGATTACTCTTCGCGGCTTCGTG CCCTTAGTTCCCTCTGGCTTGCTCGGCCGAAAGAATAGCAAGCGCAAGTAACTTGACTGC AACCACATTTTTCGGGTTTGGGAGGTGATGGTGATCTTACCTGGAAGAGTTGACAATCCT GCAAAGGACTTGATTCGGAGATATTTGCACATACTATAATCCAAAAGAGATCCTTGTGTT CAGGTAGCTTAGTCTTATGGTTAAGTGCATTAGGCCCTGGCCCATGTTGTACTGTTAGCC GCTGTAAAATACTGTTCCATTATTACTTATGTATCTGTAATATCCTAATTTTCAGAGAAT CATTAGAATGGGAATTGGGAACGGTCTTATTGACTATCCCGTGGGTATTTGACATCTCTT AGGAAAAACTAGCTTACTGTCATGGACACAGCGCCATGTCAATAATCTAATCAAGGATAT GTGACCATTCAGTTGCATTGG