Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0279700-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:9913527:9917318:1 gene:Os01g0279700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHATE TRANSPORTER 21 description:Major facilitator superfamily protein. (Os01t0279700-01);Major facilitator superfamily protein. (Os01t0279700-02);Non-protein coding transcript. (Os01t0279700-03)
Sequence

ATGCTCTACCTGCTGCCGCTCTCCGTCTCCTGCCGGGTCCCCGGCTCGCCGCCGGCGCCG
CGCTCGCGGCGCTTCCTCGACCCCGGCGGCGGCCGGGGAGTTGGGGATGGGTTAGGCGGC
GTCAGGGTGTTCCGGAGGCGGGCGCTGCGAGGGACCGACGTCCGGTCGAACACCTCGTCG
TCGTCGTCGCGGAAGGGCCGCCACGACGACGCGCGACACGACGGGGGATACGGCGACGAC
GGCGACGCTGGGGCGCTGCTGGCGTCGGTGAGGAGGCTGCTGCTCTCCGGGTCGGCGCAG
GACGACGCGGCGGAGGGGGAGGCGGAGGAGGACGAGCAGGGTCAGTTCCCCAAGCGATGG
GCCATCGTCTTCCTCTGCTTCTCCGCATTCCTCCTCTGCAACATGGACCGCGTAAACATG
AGCATTGCCATTCTGCCAATGTCTGCAGAATTCGGATGGAACCCACAAACTGTTGGCCTC
ATTCAGTCATCTTTCTTCTGGGGCTACCTGCTAACTCAGATAGCAGGAGGAATCTGGGCA
GATACAGTTGGAGGGAAGACTGTCCTTGGCTTCGGCGTCATTTGGTGGTCGATAGCCACA
GCTCTTACGCCTTTTGCGGCGAAGCTGGGGTTACCATTCCTCCTTGTGACCCGTGCTTTC
ATGGGAGTTGGTGAGGGAGTTGCCATGCCTGCGATGAATAATATTCTTTCGAAATGGGTT
CCTGTATCAGAGAGGAGCAGATCATTGGCTCTCGTGTATAGTGGAATGTACCTTGGGTCA
GTGACAGGGCTTGCATTTTCCCCATTGCTGATACATAACTTTGGCTGGCCATCGGTCTTC
TACTCCTTTGGGTCTCTGGGTGTATTTTGGTTTTCGACATGGGCGAGCAAGGCGTATAGT
AGTCCACTTGAGGATCCAGGAATTAGTGCTGAAGAGAAGAAGCTTATAACCAGTCAAACC
ACAGGAGGAGAGCCTGTTAAAGAAATTCCATGGGGACTAATATTATCGAAACCCCCTGTT
TGGGCTCTTATAGTGTCTCATTTCTGCCATAACTGGGGAACTTTCATCTTGCTCACATGG
ATGCCAACATACTACAACCAGGTTCTGAAATTCAACCTCACAGAATCCGGCCTTTTCTGT
GTTCTCCCCTGGTTAACAATGGCAGTTTCTGCAAATTTTGGTGGTTGGATAGCAGATACG
CTTGTCAGTAGAGGATTATCAGTGACAACAGTTCGGAAGATCATGCAGTCAATTGGATTC
TTAGGGCCCGCATTTTTTCTGACTCAACTGAGCCATATCGATTCACCAGCAATGGCAGTG
TTGTGCATGGCTTGTAGCCAGGGAACTGATGCATTCTCACAGTCCGGTCTATACTCAAAT
CACCAAGATATCGGTCCTCGATACGCTGGTGTACTGCTTGGTCTTTCTAACACGGCTGGG
GTTTTAGCTGGTGTGTTTGGCACAGCGGCAACAGGATACATCTTGCAGCATGGTTCTTGG
GATGATGTCTTCAAAGTATCTGTTGTGCTGTATCTGGTTGGGACTTTGGTCTGGAACCTA
TTCTCGACCGGTGAAAAAATTATCGATTGA

Peptide Sequence

PEP ID

Os01t0279700-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:9913527:9917318:1 gene:Os01g0279700 transcript:Os01t0279700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHATE TRANSPORTER 21 description:Major facilitator superfamily protein. (Os01t0279700-01);Major facilitator superfamily protein. (Os01t0279700-02);Non-protein coding transcript. (Os01t0279700-03)
Sequence

MLYLLPLSVSCRVPGSPPAPRSRRFLDPGGGRGVGDGLGGVRVFRRRALRGTDVRSNTSS
SSSRKGRHDDARHDGGYGDDGDAGALLASVRRLLLSGSAQDDAAEGEAEEDEQGQFPKRW
AIVFLCFSAFLLCNMDRVNMSIAILPMSAEFGWNPQTVGLIQSSFFWGYLLTQIAGGIWA
DTVGGKTVLGFGVIWWSIATALTPFAAKLGLPFLLVTRAFMGVGEGVAMPAMNNILSKWV
PVSERSRSLALVYSGMYLGSVTGLAFSPLLIHNFGWPSVFYSFGSLGVFWFSTWASKAYS
SPLEDPGISAEEKKLITSQTTGGEPVKEIPWGLILSKPPVWALIVSHFCHNWGTFILLTW
MPTYYNQVLKFNLTESGLFCVLPWLTMAVSANFGGWIADTLVSRGLSVTTVRKIMQSIGF
LGPAFFLTQLSHIDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAG
VLAGVFGTAATGYILQHGSWDDVFKVSVVLYLVGTLVWNLFSTGEKIID

Transcript Sequence

Transcript ID

Os01t0279700-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:9913527:9917318:1 gene:Os01g0279700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHATE TRANSPORTER 21 description:Major facilitator superfamily protein. (Os01t0279700-01);Major facilitator superfamily protein. (Os01t0279700-02);Non-protein coding transcript. (Os01t0279700-03)
Sequence

GTGGAGCCGAGGCCGAGGCCGAGCTGAGCTGAGCTCGCTTCCGTGCTCGGCCAGCGCACC
CGCGCACGCAAGCAAGCAAGCAACCGAGCAAGAAGACCTGCGCTGCGCGCGCGCGCGCTG
ACGGGCGGAGGCGAGGCGAGGCGATGCTCTACCTGCTGCCGCTCTCCGTCTCCTGCCGGG
TCCCCGGCTCGCCGCCGGCGCCGCGCTCGCGGCGCTTCCTCGACCCCGGCGGCGGCCGGG
GAGTTGGGGATGGGTTAGGCGGCGTCAGGGTGTTCCGGAGGCGGGCGCTGCGAGGGACCG
ACGTCCGGTCGAACACCTCGTCGTCGTCGTCGCGGAAGGGCCGCCACGACGACGCGCGAC
ACGACGGGGGATACGGCGACGACGGCGACGCTGGGGCGCTGCTGGCGTCGGTGAGGAGGC
TGCTGCTCTCCGGGTCGGCGCAGGACGACGCGGCGGAGGGGGAGGCGGAGGAGGACGAGC
AGGGTCAGTTCCCCAAGCGATGGGCCATCGTCTTCCTCTGCTTCTCCGCATTCCTCCTCT
GCAACATGGACCGCGTAAACATGAGCATTGCCATTCTGCCAATGTCTGCAGAATTCGGAT
GGAACCCACAAACTGTTGGCCTCATTCAGTCATCTTTCTTCTGGGGCTACCTGCTAACTC
AGATAGCAGGAGGAATCTGGGCAGATACAGTTGGAGGGAAGACTGTCCTTGGCTTCGGCG
TCATTTGGTGGTCGATAGCCACAGCTCTTACGCCTTTTGCGGCGAAGCTGGGGTTACCAT
TCCTCCTTGTGACCCGTGCTTTCATGGGAGTTGGTGAGGGAGTTGCCATGCCTGCGATGA
ATAATATTCTTTCGAAATGGGTTCCTGTATCAGAGAGGAGCAGATCATTGGCTCTCGTGT
ATAGTGGAATGTACCTTGGGTCAGTGACAGGGCTTGCATTTTCCCCATTGCTGATACATA
ACTTTGGCTGGCCATCGGTCTTCTACTCCTTTGGGTCTCTGGGTGTATTTTGGTTTTCGA
CATGGGCGAGCAAGGCGTATAGTAGTCCACTTGAGGATCCAGGAATTAGTGCTGAAGAGA
AGAAGCTTATAACCAGTCAAACCACAGGAGGAGAGCCTGTTAAAGAAATTCCATGGGGAC
TAATATTATCGAAACCCCCTGTTTGGGCTCTTATAGTGTCTCATTTCTGCCATAACTGGG
GAACTTTCATCTTGCTCACATGGATGCCAACATACTACAACCAGGTTCTGAAATTCAACC
TCACAGAATCCGGCCTTTTCTGTGTTCTCCCCTGGTTAACAATGGCAGTTTCTGCAAATT
TTGGTGGTTGGATAGCAGATACGCTTGTCAGTAGAGGATTATCAGTGACAACAGTTCGGA
AGATCATGCAGTCAATTGGATTCTTAGGGCCCGCATTTTTTCTGACTCAACTGAGCCATA
TCGATTCACCAGCAATGGCAGTGTTGTGCATGGCTTGTAGCCAGGGAACTGATGCATTCT
CACAGTCCGGTCTATACTCAAATCACCAAGATATCGGTCCTCGATACGCTGGTGTACTGC
TTGGTCTTTCTAACACGGCTGGGGTTTTAGCTGGTGTGTTTGGCACAGCGGCAACAGGAT
ACATCTTGCAGCATGGTTCTTGGGATGATGTCTTCAAAGTATCTGTTGTGCTGTATCTGG
TTGGGACTTTGGTCTGGAACCTATTCTCGACCGGTGAAAAAATTATCGATTGATGCTTGT
ATATAGCCTGCTTACAGTTCAAAATGGAAAGTACATACGGTTCAGTAACTGGTGAGATGA
GAATTGCATTCGATCAACATCCATTCCATGTGAAGCTCAACTCTTTGCAGAAACAGAACT
ACAGACTGCAAACTTTTCCGCGCAGCGTTAGACATGCAATTCTTGGCAGAAGAAGTTTCA
AGTGTTCGAATTTTTCACATGATTCAGGATCTTCGCACAATTTTGCAAATGAAGCATGTG
CAAGAGGTTTGAGTTGAGCAATTACCAACAGCCAGTTTTTTAGGACTCTGTAAGTATAGG
TATTTCTGTACAGCTTAGATGAAGAATCCACCATCCACCGTACACCCCTATTATTTTTGA
CTTGTTACACAATTTTCTTGAACATCGTATTTCTGTAAAGTTTGTAGTTAACAAGTTTAG
GAATTCGGCAATCTTACCTGATTCTTGTGAATTTAACTGTTTGAGATATGGCCCTTGGCA
TTTGATGGGCATGGTTTCATCT