Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0279100-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:9874379:9876678:1 gene:Os01g0279100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHARBITIS NIL LEUCINE ZIPPER description:Subunit of magnesium-protoporphyrin IX monomethyl ester cyclase (EC:1.14.13.81), Core component of FLU-YGL8-LCAA-POR complex, Chlorophyll biosynthesis, Chloroplast development (Os01t0279100-01);Similar to Magnesium-protoporphyrin ix monomethyl ester cyclase (Fragment). (Os01t0279100-02)
Sequence	ATGGCCTCCTCCGCCATGGAGCTCTCCCTCCTCAACCCGGCGGCAATGCGCGGCCTCTCC GCCGCCAAGCCCCGCGTCGTGTCTTCCAGGCGCATCGTGCGGTTCCGCGTGGCGTCGTCA GCCGCGGCGCCGCCCGCGGCGAAGCCCGGGACGCCCAAGAAGCGCGGGAAGACGGAGATC CAGGAGACGCTGCTGACGCCGCGGTTCTACACCACGGACTTCGACGAGATGGAGCGGCTG TTCAACGCCGAGATCAACAAGCAGCTCAACCAGGAGGAGTTCGACGCGCTGCTGCAGGAG TTCAAGACGGACTATAACCAGACCCACTTCGTCCGCAACCCGGAGTTCAAGGCCGCCGCC GACAAGATGGAGGGGCCTCTCAGGCAGATCTTCGTCGAGTTCCTCGAGCGCTCCTGCACC GCGGAGTTCTCCGGGTTCCTCCTCTACAAGGAGCTCGGCCGCAGGCTCAAGAAAACAAAC CCAGTGGTGGCTGAGATCTTCTCGCTCATGTCCAGGGATGAGGCCCGGCACGCTGGGTTC TTGAACAAGGGGCTGTCTGATTTCAACTTGGCACTGGACCTCGGGTTCTTGACCAAGGCT AGGAAGTACACCTTCTTCAAGCCCAAGTTCATCTTCTACGCGACCTACCTGTCGGAGAAG ATTGGGTACTGGAGGTACATCACCATCTTCAGGCACCTCAAGGCGAACCCGGAGTACCAG GTGTACCCCATCTTCAAGTACTTTGAGAACTGGTGCCAGGATGAGAACCGTCACGGTGAT TTCTTCTCCGCGCTGCTCAAGGCGCAGCCGCAGTTCCTCAACGACTGGAAGGCCAAGCTC TGGTCACGGTTCTTCTGCCTCTCGGTGTATGTGACCATGTACCTAAATGATTGCCAACGT ACTACATTCTATGAAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATT GAGACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAACCCTGAA TTCAAGAGGAAGTTAGACAGGATGGTGGAGATCAACAAAAAGATCATTGCCATAGGCGAG TCTGACGATATCCCCCTGGTGAAGAACCTGAAGAGGATTCCTCACGTTGCCGCTCTGGTG TCTGAGATCATTGCTGCGTACCTCATGCCCCCAATCGAGTCTGGCTCTGTTGATTTCGCT GAATTCGAGCCCCAGCTTGTCTACTGA

Peptide Sequence

PEP ID	Os01t0279100-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:9874379:9876678:1 gene:Os01g0279100 transcript:Os01t0279100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHARBITIS NIL LEUCINE ZIPPER description:Subunit of magnesium-protoporphyrin IX monomethyl ester cyclase (EC:1.14.13.81), Core component of FLU-YGL8-LCAA-POR complex, Chlorophyll biosynthesis, Chloroplast development (Os01t0279100-01);Similar to Magnesium-protoporphyrin ix monomethyl ester cyclase (Fragment). (Os01t0279100-02)
Sequence	MASSAMELSLLNPAAMRGLSAAKPRVVSSRRIVRFRVASSAAAPPAAKPGTPKKRGKTEI QETLLTPRFYTTDFDEMERLFNAEINKQLNQEEFDALLQEFKTDYNQTHFVRNPEFKAAA DKMEGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGF LNKGLSDFNLALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIFRHLKANPEYQ VYPIFKYFENWCQDENRHGDFFSALLKAQPQFLNDWKAKLWSRFFCLSVYVTMYLNDCQR TTFYEGIGLDTKEFDMHVIIETNRTTARIFPAVLDVENPEFKRKLDRMVEINKKIIAIGE SDDIPLVKNLKRIPHVAALVSEIIAAYLMPPIESGSVDFAEFEPQLVY

Transcript Sequence

Transcript ID	Os01t0279100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:9874379:9876678:1 gene:Os01g0279100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHARBITIS NIL LEUCINE ZIPPER description:Subunit of magnesium-protoporphyrin IX monomethyl ester cyclase (EC:1.14.13.81), Core component of FLU-YGL8-LCAA-POR complex, Chlorophyll biosynthesis, Chloroplast development (Os01t0279100-01);Similar to Magnesium-protoporphyrin ix monomethyl ester cyclase (Fragment). (Os01t0279100-02)
Sequence	AAAACTCTTCTTCCCCCTCCCGCCCCGGCCAGGTGTTTGACGAAATGGCCTCCTCCGCCA TGGAGCTCTCCCTCCTCAACCCGGCGGCAATGCGCGGCCTCTCCGCCGCCAAGCCCCGCG TCGTGTCTTCCAGGCGCATCGTGCGGTTCCGCGTGGCGTCGTCAGCCGCGGCGCCGCCCG CGGCGAAGCCCGGGACGCCCAAGAAGCGCGGGAAGACGGAGATCCAGGAGACGCTGCTGA CGCCGCGGTTCTACACCACGGACTTCGACGAGATGGAGCGGCTGTTCAACGCCGAGATCA ACAAGCAGCTCAACCAGGAGGAGTTCGACGCGCTGCTGCAGGAGTTCAAGACGGACTATA ACCAGACCCACTTCGTCCGCAACCCGGAGTTCAAGGCCGCCGCCGACAAGATGGAGGGGC CTCTCAGGCAGATCTTCGTCGAGTTCCTCGAGCGCTCCTGCACCGCGGAGTTCTCCGGGT TCCTCCTCTACAAGGAGCTCGGCCGCAGGCTCAAGAAAACAAACCCAGTGGTGGCTGAGA TCTTCTCGCTCATGTCCAGGGATGAGGCCCGGCACGCTGGGTTCTTGAACAAGGGGCTGT CTGATTTCAACTTGGCACTGGACCTCGGGTTCTTGACCAAGGCTAGGAAGTACACCTTCT TCAAGCCCAAGTTCATCTTCTACGCGACCTACCTGTCGGAGAAGATTGGGTACTGGAGGT ACATCACCATCTTCAGGCACCTCAAGGCGAACCCGGAGTACCAGGTGTACCCCATCTTCA AGTACTTTGAGAACTGGTGCCAGGATGAGAACCGTCACGGTGATTTCTTCTCCGCGCTGC TCAAGGCGCAGCCGCAGTTCCTCAACGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCT GCCTCTCGGTGTATGTGACCATGTACCTAAATGATTGCCAACGTACTACATTCTATGAAG GGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGACCAACCGCACAA CAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAACCCTGAATTCAAGAGGAAGTTAG ACAGGATGGTGGAGATCAACAAAAAGATCATTGCCATAGGCGAGTCTGACGATATCCCCC TGGTGAAGAACCTGAAGAGGATTCCTCACGTTGCCGCTCTGGTGTCTGAGATCATTGCTG CGTACCTCATGCCCCCAATCGAGTCTGGCTCTGTTGATTTCGCTGAATTCGAGCCCCAGC TTGTCTACTGATTCTGTAGGAAGACCATCTCCAGCTTTTTTTTCCTTCAAAAAGGAATGC TGATATTTTCTGCCTGAGGGGCTTCGAACGGTGAGATGATGGGTGGTTAGCAGAATCTGC ACCTCGTGTGTTCCTTTGTAAAGTATTGAGACTTCAACAATGTACCATTTGGCAAAGGTT TTGTTATGATCTCCATTTAAGTGGCAGTGAACTGCATCACAGTGGGGGTTACAGTTTTCC AACAGAAGGGTAATTATATGATGTTTTGGGGTTGTTGATACTTCATACTTAAGTTCCTTA GCATCCTAAGTATCTCTTAGCTGTGCTCTGCATTATGGCATAATGTTTGGTCTTGGTGAA GGTGAATAGTGACGCCAACTACTGAAAACCTGGACAATGCAAGTGTTGGAAGATGTTGTA AATGT