Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0277500-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:9733832:9738224:1 gene:Os01g0277500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Dof zinc factor 4, Dof transcription factor 4 description:Zinc finger, Dof-type domain containing protein. (Os01t0277500-01)
Sequence	TGTCATTACTCCGAACACAACGCGAGCGGCCGCCTCCTCCTCCGCCCAGTGACATGCCAC CCGCCGCCGCCGCCGCCGCTGGCATCATCCCCGCTCGTCGCCGTCGTCGTGCTGCGCCCG AGGAGGAGGAGGAGGAGCCGGTGCCGGTGCCGGTGCCGGTGGTGGCAGCGCGGACGAGAT CGGGGCGCCGCTATGGCCGCGCTTAGGCAGGGCGACGACCCCGCCATCAAGCTCTTCGGC CGCACCATCCCCCTCCTCCTCGACCCCCCCGCCGCCGCCGCCGCCGCCGCCGACGAGGTC ATGCCTAATTTAGGAAATGGTGTAAAAACCAATAATGACTTACCTTTAGTCTCAGACAAG CTTTTGATTGTCAAAGGTATTCCTTTTTGTCCCAACAATAGTAAGAAAAATGATTTACAA GGCATCAGCAGACCGGATGGAAGAATAGAAATCGATTCCATGACTGAGGATGTTAAGACT GAGCCTGATGGATCTGTCCCTGAGAAGATACTCAAGAAGCCAGATAAGATTCTGCCATGT CCACGCTGCAATAGCATGGAAACAAAGTTCTGCTACTTCAACAACTACAATGTTCACCAG CCCAGGCACTTCTGCAGGAACTGCCAAAGATATTGGACCGCTGGTGGAGCTATGAGGAAT GTCCCAGTTGGTGCTGGAAGACGCAGAAATAAGCATGTGTCAAAATACTGTCAGGCGATG ATGACGTGCAATAATACTGTAGCTCCTGGAGATGTTTCTGATGTGGTTCACCATCAGGTT ATTACACATGGATCTTCTCTCCTTCCAGCAACACTGAAGGAAAATGAAACACCTACAGAA TTCATATCAGAAGTACCACCATGTAAGTCTTCAGCTTCAATCCTTGATATTGGAGAGCCG AATGATACTGACCTTGTTCCCTTGGCCTCTGGTGATAACAAGGAAGAAAAATCATGTGCA TCTTCTGTGGTAGTATCCAGCTGTTCAGAGAATCTGATGCCAGATAATGCAATTATGAAA GAGCCAAACAACAGGTCAGGATGTTGTAATGGTGTGGCATTGCCTTTCCCTACTGGACCT GCTTTGGTGCTCCCCTGGAGTCTTGGATGGAACAGTGTTGCTCTCATGCCAGCTACCCAG TGCTCGATGCAGCCCGTTCTTGGGTTAAAAGATGGGATACCCTGCCCGCCTTCATGGCCA CCGCAACTGATGGTGCCGGCCCCAGGAATCTGTACTCCTGTTGTTCCAATCCCTCTTGTG CCACCTCTGTGGAGCTGCTTCCCTGGCTGGCCTAATGGAATGTGGAATGCACAATGCCCT GGAGGTAATACTACTGTGCTGCCGTCAACCGCTCCAAACAAAATTTCTTGTTCAGGAAGC AGTTCTCTGGTGTTGGGAAAGCATTCAAGAGAAGAAAGCTTGCAGGAAGAAGAGAAGACG AGAAATTACTTATGGGTACCTAAAACTCTTAGGATTGATGATCCAGCTGAGGCTGCAAAG AGTTCAATCTGGGCGACCCTTGGCATCAAGCCTGACGATAAAGGCATATTCAAGTCTTTC CAGCCAAATGTTGCGAAAAATGGCACGGCACCAGAATCGCCTCAGGCTCTGCAGGCCAAT CCAGCAGCATTTTCGCGTTCTCAATCGTTTCAAGAGACGACTTGA

Peptide Sequence

PEP ID	Os01t0277500-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:9733832:9738224:1 gene:Os01g0277500 transcript:Os01t0277500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Dof zinc factor 4, Dof transcription factor 4 description:Zinc finger, Dof-type domain containing protein. (Os01t0277500-01)
Sequence	CHYSEHNASGRLLLRPVTCHPPPPPPLASSPLVAVVVLRPRRRRRSRCRCRCRWWQRGRD RGAAMAALRQGDDPAIKLFGRTIPLLLDPPAAAAAAADEVMPNLGNGVKTNNDLPLVSDK LLIVKGIPFCPNNSKKNDLQGISRPDGRIEIDSMTEDVKTEPDGSVPEKILKKPDKILPC PRCNSMETKFCYFNNYNVHQPRHFCRNCQRYWTAGGAMRNVPVGAGRRRNKHVSKYCQAM MTCNNTVAPGDVSDVVHHQVITHGSSLLPATLKENETPTEFISEVPPCKSSASILDIGEP NDTDLVPLASGDNKEEKSCASSVVVSSCSENLMPDNAIMKEPNNRSGCCNGVALPFPTGP ALVLPWSLGWNSVALMPATQCSMQPVLGLKDGIPCPPSWPPQLMVPAPGICTPVVPIPLV PPLWSCFPGWPNGMWNAQCPGGNTTVLPSTAPNKISCSGSSSLVLGKHSREESLQEEEKT RNYLWVPKTLRIDDPAEAAKSSIWATLGIKPDDKGIFKSFQPNVAKNGTAPESPQALQAN PAAFSRSQSFQETT

Transcript Sequence

Transcript ID	Os01t0277500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:9733832:9738224:1 gene:Os01g0277500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Dof zinc factor 4, Dof transcription factor 4 description:Zinc finger, Dof-type domain containing protein. (Os01t0277500-01)
Sequence	ACTACTATAGTGTCATTACTCCGAACACAACGCGAGCGGCCGCCTCCTCCTCCGCCCAGT GACATGCCACCCGCCGCCGCCGCCGCCGCTGGCATCATCCCCGCTCGTCGCCGTCGTCGT GCTGCGCCCGAGGAGGAGGAGGAGGAGCCGGTGCCGGTGCCGGTGCCGGTGGTGGCAGCG CGGACGAGATCGGGGCGCCGCTATGGCCGCGCTTAGGCAGGGCGACGACCCCGCCATCAA GCTCTTCGGCCGCACCATCCCCCTCCTCCTCGACCCCCCCGCCGCCGCCGCCGCCGCCGC CGACGAGGTCATGCCTAATTTAGGAAATGGTGTAAAAACCAATAATGACTTACCTTTAGT CTCAGACAAGCTTTTGATTGTCAAAGGTATTCCTTTTTGTCCCAACAATAGTAAGAAAAA TGATTTACAAGGCATCAGCAGACCGGATGGAAGAATAGAAATCGATTCCATGACTGAGGA TGTTAAGACTGAGCCTGATGGATCTGTCCCTGAGAAGATACTCAAGAAGCCAGATAAGAT TCTGCCATGTCCACGCTGCAATAGCATGGAAACAAAGTTCTGCTACTTCAACAACTACAA TGTTCACCAGCCCAGGCACTTCTGCAGGAACTGCCAAAGATATTGGACCGCTGGTGGAGC TATGAGGAATGTCCCAGTTGGTGCTGGAAGACGCAGAAATAAGCATGTGTCAAAATACTG TCAGGCGATGATGACGTGCAATAATACTGTAGCTCCTGGAGATGTTTCTGATGTGGTTCA CCATCAGGTTATTACACATGGATCTTCTCTCCTTCCAGCAACACTGAAGGAAAATGAAAC ACCTACAGAATTCATATCAGAAGTACCACCATGTAAGTCTTCAGCTTCAATCCTTGATAT TGGAGAGCCGAATGATACTGACCTTGTTCCCTTGGCCTCTGGTGATAACAAGGAAGAAAA ATCATGTGCATCTTCTGTGGTAGTATCCAGCTGTTCAGAGAATCTGATGCCAGATAATGC AATTATGAAAGAGCCAAACAACAGGTCAGGATGTTGTAATGGTGTGGCATTGCCTTTCCC TACTGGACCTGCTTTGGTGCTCCCCTGGAGTCTTGGATGGAACAGTGTTGCTCTCATGCC AGCTACCCAGTGCTCGATGCAGCCCGTTCTTGGGTTAAAAGATGGGATACCCTGCCCGCC TTCATGGCCACCGCAACTGATGGTGCCGGCCCCAGGAATCTGTACTCCTGTTGTTCCAAT CCCTCTTGTGCCACCTCTGTGGAGCTGCTTCCCTGGCTGGCCTAATGGAATGTGGAATGC ACAATGCCCTGGAGGTAATACTACTGTGCTGCCGTCAACCGCTCCAAACAAAATTTCTTG TTCAGGAAGCAGTTCTCTGGTGTTGGGAAAGCATTCAAGAGAAGAAAGCTTGCAGGAAGA AGAGAAGACGAGAAATTACTTATGGGTACCTAAAACTCTTAGGATTGATGATCCAGCTGA GGCTGCAAAGAGTTCAATCTGGGCGACCCTTGGCATCAAGCCTGACGATAAAGGCATATT CAAGTCTTTCCAGCCAAATGTTGCGAAAAATGGCACGGCACCAGAATCGCCTCAGGCTCT GCAGGCCAATCCAGCAGCATTTTCGCGTTCTCAATCGTTTCAAGAGACGACTTGAGGAGC TTTTCTGTTTGTTTTCTGACATAAGGATCATACTGCTACCTCCACAGGAATGGTCACAAT GTTTCTATCCAGTGTGATCTTGAGCTCATATGTTGCTAGAGCCAGATCAAATCTAGCAAC TCAAATCTGGCAGAGTTGCCAGTGATGAACTTGGTTCTGTGGTAATGTTTATGTTGATCA AAAATCTCTGCTTCTCCCCAAGGAGAGAATTGTGAGCTTGTGATCCGGAGCTCAAAACAT GCTCCATCTGAAATCATTAGTCAATAGCTGTCGCTGTGATGGAGGTGAAAAGGATAACTG TGAAGTCTCTTTTTTCTTACTTTCTTTGAATTTTTAGACTGGCATTCTGACGTTTGTATA TAGCTTCTCAAAATTCATGTAATGGCTTCTATGTTAACCTGCAGAAAATGCATAATTTTG TAACTGGATGGGGATCAACTCCGTTTGGACATAAGCAAATCAGCCTAGTTATCTCATTTG CAGCATTGAAATTTACCCCAAACTAACACCATATCTGTCAATACCATTGGGTCAAAATGA ACACCCATTTCTAAATTATCAAAATTCATTTACC