Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0276200-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:9671077:9676036:-1 gene:Os01g0276200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:voltage-dependent anion channel 7, voltage-dependent anion-selective channel 7 description:Similar to Mitochondrial import receptor subunit TOM40. (Os01t0276200-00)
Sequence

CTAGGTTATTTTGCGTTTACAAAGATTTTATCCCTAAATTCTGGCCAACAAAAAATCGGC
AGCGTATACTTGAAGCCCAAGAAGGAATCAAGCCCCTCCCAAATACAACGCACGAATCCC
GATGCAAATCCAACGGGTGTGAGGCGCCTACCAGCACCGAGCCCGTCAACCCCCCCAACT
CCAGAAAACCCTCCTAAAACCCACACCACGACACGCATCCGACCTACCCCCTCTCTCGCT
CCGCCGCCGCCGCCGCCTCCCCCCAAATCGCAAGCGCGCCGCCACCGCCATGGGCGCGGT
CGTCAGCCACGCCTCCGCCGCGGCCCCGCCTCCCCCACCCACGGGCTACGCGCCCTTCGT
GGACCCCGCGGCCGCGGCGGCGCCGCCACCGGCGGAGAAGGACGCGGCGGCCGACGAGGA
GAAGGTGGACTACATGAACCTCCCCTGCCCCGTCCCCTACGAGGAGATCCAGCGCGAGGC
CTTCACGGTTTTGGCTGTATCGTGACAATCCTTGTGCGCCTCAGTGTGTCCATGGGATCC
ATGGAGCTCCCATCGCAGGGGGCGGATGTGATCAAGGTCCCCACCTCCAACTACGAGTTC
GGCGCAAACTTTATGGATCCCAAGATGATGCTCATTGGGAGGGTTTCGCACGACGGGAGG
GTGACCGCGCGCGTTAAGTGCGATCTATTGGAAAATCTTTGCCTCAAGATAAATGCTCAG
TTGACGAACGAGCCCCATTACTCCCAAGGCATGTTTAGCTTTGATTATAAGGGCAAAGAT
TTTAGATCACAGTTCCAACTTGGGAATAATGCCTTCTATGGAGGGAACTACATCCAGAGT
GTAACTAAGAACCTCTCCTTGGGAACTGAAGCTTTCTGGCTTGGGCAACAAAGAAAATCA
GGAGTTGGCTTTGTTGCTCGATATGACACAAAGAAAATGGTTGCAACTGGACAAATTGCA
ACCACTGGATTGGTTTCACTCAGTTACGTCCAAAAAGTATCAGAAAAGGTTTCCCTTGCA
TCTGATTTTATGTACAATCATATGGCGAAGGATGTAACAGCAAGTTTCGGCTATGATTAT
ATGTTGAGACAGTGTCGTCTGAGGGGGAAGATTGATACCAATGGCGTTGTTTCTGCTCTT
TTGGAGGAGCGGTTGACCCCCGGCGTGAATTTCGTTCTTTCTGCAGAGCTTGATCACTGG
AAGAAAGATTACAAATTTGGGTTTGGTATGGTTCTTGGAGAGTGA

Peptide Sequence

PEP ID

Os01t0276200-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:9671077:9676036:-1 gene:Os01g0276200 transcript:Os01t0276200-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:voltage-dependent anion channel 7, voltage-dependent anion-selective channel 7 description:Similar to Mitochondrial import receptor subunit TOM40. (Os01t0276200-00)
Sequence

LGYFAFTKILSLNSGQQKIGSVYLKPKKESSPSQIQRTNPDANPTGVRRLPAPSPSTPPT
PENPPKTHTTTRIRPTPSLAPPPPPPPPKSQARRHRHGRGRQPRLRRGPASPTHGLRALR
GPRGRGGAATGGEGRGGRRGEGGLHEPPLPRPLRGDPARGLHGFGCIVTILVRLSVSMGS
MELPSQGADVIKVPTSNYEFGANFMDPKMMLIGRVSHDGRVTARVKCDLLENLCLKINAQ
LTNEPHYSQGMFSFDYKGKDFRSQFQLGNNAFYGGNYIQSVTKNLSLGTEAFWLGQQRKS
GVGFVARYDTKKMVATGQIATTGLVSLSYVQKVSEKVSLASDFMYNHMAKDVTASFGYDY
MLRQCRLRGKIDTNGVVSALLEERLTPGVNFVLSAELDHWKKDYKFGFGMVLGE

Transcript Sequence

Transcript ID

Os01t0276200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:9671077:9676036:-1 gene:Os01g0276200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:voltage-dependent anion channel 7, voltage-dependent anion-selective channel 7 description:Similar to Mitochondrial import receptor subunit TOM40. (Os01t0276200-00)
Sequence

CTAGGTTATTTTGCGTTTACAAAGATTTTATCCCTAAATTCTGGCCAACAAAAAATCGGC
AGCGTATACTTGAAGCCCAAGAAGGAATCAAGCCCCTCCCAAATACAACGCACGAATCCC
GATGCAAATCCAACGGGTGTGAGGCGCCTACCAGCACCGAGCCCGTCAACCCCCCCAACT
CCAGAAAACCCTCCTAAAACCCACACCACGACACGCATCCGACCTACCCCCTCTCTCGCT
CCGCCGCCGCCGCCGCCTCCCCCCAAATCGCAAGCGCGCCGCCACCGCCATGGGCGCGGT
CGTCAGCCACGCCTCCGCCGCGGCCCCGCCTCCCCCACCCACGGGCTACGCGCCCTTCGT
GGACCCCGCGGCCGCGGCGGCGCCGCCACCGGCGGAGAAGGACGCGGCGGCCGACGAGGA
GAAGGTGGACTACATGAACCTCCCCTGCCCCGTCCCCTACGAGGAGATCCAGCGCGAGGC
CTTCACGGTTTTGGCTGTATCGTGACAATCCTTGTGCGCCTCAGTGTGTCCATGGGATCC
ATGGAGCTCCCATCGCAGGGGGCGGATGTGATCAAGGTCCCCACCTCCAACTACGAGTTC
GGCGCAAACTTTATGGATCCCAAGATGATGCTCATTGGGAGGGTTTCGCACGACGGGAGG
GTGACCGCGCGCGTTAAGTGCGATCTATTGGAAAATCTTTGCCTCAAGATAAATGCTCAG
TTGACGAACGAGCCCCATTACTCCCAAGGCATGTTTAGCTTTGATTATAAGGGCAAAGAT
TTTAGATCACAGTTCCAACTTGGGAATAATGCCTTCTATGGAGGGAACTACATCCAGAGT
GTAACTAAGAACCTCTCCTTGGGAACTGAAGCTTTCTGGCTTGGGCAACAAAGAAAATCA
GGAGTTGGCTTTGTTGCTCGATATGACACAAAGAAAATGGTTGCAACTGGACAAATTGCA
ACCACTGGATTGGTTTCACTCAGTTACGTCCAAAAAGTATCAGAAAAGGTTTCCCTTGCA
TCTGATTTTATGTACAATCATATGGCGAAGGATGTAACAGCAAGTTTCGGCTATGATTAT
ATGTTGAGACAGTGTCGTCTGAGGGGGAAGATTGATACCAATGGCGTTGTTTCTGCTCTT
TTGGAGGAGCGGTTGACCCCCGGCGTGAATTTCGTTCTTTCTGCAGAGCTTGATCACTGG
AAGAAAGATTACAAATTTGGGTTTGGTATGGTTCTTGGAGAGTGAGGCAGTGTCGGCGGT
TTCTTCGGAGACGCATGTACGATTATAGCAGTTGGCATTTG