Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0276100-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:9665409:9670111:1 gene:Os01g0276100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ISOCITRATE DEHYDROGENASE SUBUNIT A description:Similar to 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH). (Os01t0276100-01)
Sequence	ATGGCGCTACGGAGGCTGCTCCAGGGGAGCGTCCTGCCGCGGATGGCGGGCAGAGCCGCC GCGGCGCCGTTCTCGACGGCGTCCGGGGAGACCGTCCGCGCCACGCTCTTCCCAGGCGAC GGCATCGGGCCGGAGATCGCCGAGTCGGTCAAGCAGGTATTCAATGTTGCAGGGGTACCA ATAGAATGGGAAGAACACTATGTTGGTACAGAAGTTGATCCCAGAACAGAGAGTTTTCTG ACTTGGGAAAGCTTGGAGTCGGTGCGGAGAAACAAAGTTGGCTTGAAAGGTCCTATGGCT ACGCCTATTGGAAAAGGCCACCGTTCATTGAATCTTACACTAAGGAAAGAGCTTGGTCTT TATGCAAATGTTAGACCTTGCAACAGCCTCCCAGGATACAAGACTCGATATGATGATGTG AACCTTGTGACTATTCGTGAAAATACCGAGGGAGAATATAGTGGCCTTGAGCATCAGGTT GTGAGGGGTGTTGTGGAAAGCTTAAAAATTATCACTCGCCAAGCAAGTTTAAGAGTGGCA GAGTATGCTTTCCACTATGCCAAGACCAATGGCCGGGAGAGGGTCTCTGCGATACACAAG GCCAATATCATGAGGAAGACCGATGGTCTTTTCCTCAAGTGCTGTCGTGAAGTGGCTGAG AAGTACCCTGAAATTGTATACGAGGAGGTCATCATTGACAATTGTTGTATGACGCTTGTG AAGAATCCTGGTCTTTTTGATGTACTGGTGATGCCAAATCTTTATGGTGATATTATTAGT GATCTTTGTGCTGGTCTGATTGGAGGCTTGGGCTTGACACCCAGCTGCAACATTGGTGAA GGTGGCATTTGTCTGGCAGAAGCTGTTCACGGTTCTGCTCCTGATATTGCTGGCAAGAAC CTTGCAAACCCGACCGCTCTTATGCTGAGTGCTGTTATGATGTTGCGCCACTTGCAATTC AATAACCAAGCAGACCGGATCCACAACGCCATCCTCCAGACCATCTCCGAGGGGAAATTC AGGACTGCTGATCTCGGCGGAAAGGCGTCGACTTCAGACTTCACGAAGGCAGTCTGTGAT CATATCTGA

Peptide Sequence

PEP ID	Os01t0276100-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:9665409:9670111:1 gene:Os01g0276100 transcript:Os01t0276100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ISOCITRATE DEHYDROGENASE SUBUNIT A description:Similar to 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH). (Os01t0276100-01)
Sequence	MALRRLLQGSVLPRMAGRAAAAPFSTASGETVRATLFPGDGIGPEIAESVKQVFNVAGVP IEWEEHYVGTEVDPRTESFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELGL YANVRPCNSLPGYKTRYDDVNLVTIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVA EYAFHYAKTNGRERVSAIHKANIMRKTDGLFLKCCREVAEKYPEIVYEEVIIDNCCMTLV KNPGLFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGICLAEAVHGSAPDIAGKN LANPTALMLSAVMMLRHLQFNNQADRIHNAILQTISEGKFRTADLGGKASTSDFTKAVCD HI

Transcript Sequence

Transcript ID	Os01t0276100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:9665409:9670111:1 gene:Os01g0276100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ISOCITRATE DEHYDROGENASE SUBUNIT A description:Similar to 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH). (Os01t0276100-01)
Sequence	CCCCTTCCACCATCCTCTCCTCCTCCTCCCCTTTCCCATCCATCTCTCTCTCTCTCCTCC TCCTCGCCGCCGACCGCCGCCGCCGCCGCGAGTCGCCTTCGCCGTCCGGGTAGCAGCAGG AAGAGGGAGGAAGGGGGGGCATGGCGCTACGGAGGCTGCTCCAGGGGAGCGTCCTGCCGC GGATGGCGGGCAGAGCCGCCGCGGCGCCGTTCTCGACGGCGTCCGGGGAGACCGTCCGCG CCACGCTCTTCCCAGGCGACGGCATCGGGCCGGAGATCGCCGAGTCGGTCAAGCAGGTAT TCAATGTTGCAGGGGTACCAATAGAATGGGAAGAACACTATGTTGGTACAGAAGTTGATC CCAGAACAGAGAGTTTTCTGACTTGGGAAAGCTTGGAGTCGGTGCGGAGAAACAAAGTTG GCTTGAAAGGTCCTATGGCTACGCCTATTGGAAAAGGCCACCGTTCATTGAATCTTACAC TAAGGAAAGAGCTTGGTCTTTATGCAAATGTTAGACCTTGCAACAGCCTCCCAGGATACA AGACTCGATATGATGATGTGAACCTTGTGACTATTCGTGAAAATACCGAGGGAGAATATA GTGGCCTTGAGCATCAGGTTGTGAGGGGTGTTGTGGAAAGCTTAAAAATTATCACTCGCC AAGCAAGTTTAAGAGTGGCAGAGTATGCTTTCCACTATGCCAAGACCAATGGCCGGGAGA GGGTCTCTGCGATACACAAGGCCAATATCATGAGGAAGACCGATGGTCTTTTCCTCAAGT GCTGTCGTGAAGTGGCTGAGAAGTACCCTGAAATTGTATACGAGGAGGTCATCATTGACA ATTGTTGTATGACGCTTGTGAAGAATCCTGGTCTTTTTGATGTACTGGTGATGCCAAATC TTTATGGTGATATTATTAGTGATCTTTGTGCTGGTCTGATTGGAGGCTTGGGCTTGACAC CCAGCTGCAACATTGGTGAAGGTGGCATTTGTCTGGCAGAAGCTGTTCACGGTTCTGCTC CTGATATTGCTGGCAAGAACCTTGCAAACCCGACCGCTCTTATGCTGAGTGCTGTTATGA TGTTGCGCCACTTGCAATTCAATAACCAAGCAGACCGGATCCACAACGCCATCCTCCAGA CCATCTCCGAGGGGAAATTCAGGACTGCTGATCTCGGCGGAAAGGCGTCGACTTCAGACT TCACGAAGGCAGTCTGTGATCATATCTGATCGTCCGATGTGATTCCGTCCTCTTGATTGT TTTCCTTCCCCCTAATTTTTGTTGCATACGCGGAGAGAAGCTTTAGCTTTAAGAGGTTAA CTGGCGGCACCTCAATTTCTTTGGGCTTCAGCATGGGTTAAGACCACCTAATAATCCTGT CGCATTCTTGCTCTTGGAAAAGTTTCTTCCAACATTGCAGTCCAGTCAGAGAATGGCCTG TAATAATTAGTGACAAAATTATAGCAGTAGATAGAATCTGTTCATTCAAGTTCTTCAAAT TACTGGGCCAAGCTTCAATGTC