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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0276000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:9658174:9661275:-1 gene:Os01g0276000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RPL30 description:Similar to 60S ribosomal protein L30. (Os01t0276000-01)
Sequence

ATGGTGGCCGCAAAGAAGACGAAGAAGTCCACGGACAACATCAACAACAAGCTGCAGCTC
GTGATGAAGAGCGGCAAGTACACGCTCGGCTACAAGACCGTCCTCAGGACCCTCAGGAAC
TCCAAGGCGAAGCTAGTGATCATTTCTAACAACTGCCCACCTCTTCGGAAGTCAGAAATT
GAGTACTACGCTATGTTGGCCAAGGTCACCGTCCACCATTTCCACGGAAATAATGTCGAT
CTGGGGACAGCCTGTGGTAAATACTTCCGTGTTTGCTGCCTCAGCATTATTGATCCTGGT
GACTCGGATATCATCAAGACCACGGGTGAGCAGTAA

Peptide Sequence

PEP ID

Os01t0276000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:9658174:9661275:-1 gene:Os01g0276000 transcript:Os01t0276000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RPL30 description:Similar to 60S ribosomal protein L30. (Os01t0276000-01)
Sequence

MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVIISNNCPPLRKSEI
EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTTGEQ

Transcript Sequence

Transcript ID

Os01t0276000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:9658174:9661275:-1 gene:Os01g0276000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RPL30 description:Similar to 60S ribosomal protein L30. (Os01t0276000-01)
Sequence

TTCCACCTCGCAGTCGCCACCCCGAGCAGAAGCCGCCGCCGCCGCCCGAAACCCTCGCCG
CCGTCGCTTCTCCTCGGGGCGCAGCCATGGTGGCCGCAAAGAAGACGAAGAAGTCCACGG
ACAACATCAACAACAAGCTGCAGCTCGTGATGAAGAGCGGCAAGTACACGCTCGGCTACA
AGACCGTCCTCAGGACCCTCAGGAACTCCAAGGCGAAGCTAGTGATCATTTCTAACAACT
GCCCACCTCTTCGGAAGTCAGAAATTGAGTACTACGCTATGTTGGCCAAGGTCACCGTCC
ACCATTTCCACGGAAATAATGTCGATCTGGGGACAGCCTGTGGTAAATACTTCCGTGTTT
GCTGCCTCAGCATTATTGATCCTGGTGACTCGGATATCATCAAGACCACGGGTGAGCAGT
AAGGATGAGCGGTTCCGCTGGCGCTTCAGATGCTGTCACACTGAGCTGTTCTAGACATTG
TAGTTGTTGCTGGACTTGATTTGGTCTCTCTCGTGTATCGAACAGCTTTTACCAGTCAAC
CAAAGTTTCGTGGGAACATTGTTCTTGGATTGGAAAATTTTGTTCCTGGCCCGAATCATG
TTTTCAATTAGAACGCTTGGCTGTTTGTTC